RNA–Protein interactions for RNA: ENST00000473003.5

RAPGEF4-208, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 4

Gene RAPGEF4, Length 593 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-208	ENST00000473003	SH3D19	Q5HYK7	790 aa		10.15	□□□□□ -0.78
RAPGEF4-208	ENST00000473003	TMEM240	Q5SV17	173 aa		10.15	□□□□□ -0.78
RAPGEF4-208	ENST00000473003	LDHAL6A	Q6ZMR3	332 aa		10.15	□□□□□ -0.78
RAPGEF4-208	ENST00000473003	VPS37D	Q86XT2	251 aa		10.15	□□□□□ -0.78
RAPGEF4-208	ENST00000473003	ZNF280C	Q8ND82	737 aa		10.15	□□□□□ -0.78
RAPGEF4-208	ENST00000473003	EDC3	Q96F86	508 aa	Known RBP	10.15	□□□□□ -0.78
RAPGEF4-208	ENST00000473003	CNNM1	Q9NRU3	951 aa		10.15	□□□□□ -0.78
RAPGEF4-208	ENST00000473003	TMEM39A	Q9NV64	488 aa		10.15	□□□□□ -0.78
RAPGEF4-208	ENST00000473003	YBX2	Q9Y2T7	364 aa	Known RBP	10.15	□□□□□ -0.78
RAPGEF4-208	ENST00000473003	RFX7	Q2KHR2	1363 aa		10.14	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	PQBP1	O60828	265 aa	Known RBP	10.14	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	IGHA2	P01877	340 aa		10.14	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	MYCN	P04198	464 aa	Predicted RBP	10.14	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	HOXC6	P09630	235 aa		10.14	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	SLURP2	P0DP57	97 aa		10.14	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	ALAD	P13716	330 aa		10.14	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	POU3F3	P20264	500 aa	Predicted RBP	10.14	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	CYP2C19	P33261	490 aa		10.14	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	PPIG	Q13427	754 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	LRRC41	Q15345	812 aa		10.14	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	C16orf59	Q7L2K0	433 aa		10.14	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	SH3BP5L	Q7L8J4	393 aa		10.14	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	SLC44A5	Q8NCS7	719 aa		10.14	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	ZNF594	Q96JF6	807 aa	Predicted RBP	10.14	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	TBC1D2	Q9BYX2	928 aa		10.14	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	MBIP	Q9NS73	344 aa		10.14	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	RBPJL	Q9UBG7	517 aa		10.14	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	CHMP3	Q9Y3E7	222 aa		10.14	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	MTCH2	Q9Y6C9	303 aa		10.14	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	ZNF318	Q5VUA4	2279 aa		10.14	□□□□□ -0.79
RAPGEF4-208	ENST00000473003		A0A0G2JMZ2	1700 aa		10.13	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	ENTPD3	O75355	529 aa		10.13	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	TIMP1	P01033	207 aa		10.13	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	HOXA7	P31268	230 aa	Predicted RBP	10.13	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	RGS3	P49796	1198 aa		10.13	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	FOXO4	P98177	505 aa		10.13	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	ATP2B2	Q01814	1243 aa		10.13	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	DIXDC1	Q155Q3	683 aa		10.13	□□□□□ -0.79
RAPGEF4-208	ENST00000473003		Q3C1V9	767 aa		10.13	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	TAF7L	Q5H9L4	462 aa		10.13	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	ANO1	Q5XXA6	986 aa		10.13	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	PSRC1	Q6PGN9	363 aa	Predicted RBP	10.13	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	GTF3C2	Q8WUA4	911 aa	Predicted RBP	10.13	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	HLA-C	Q95604	372 aa		10.13	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	CWC22	Q9HCG8	908 aa	Known RBP	10.13	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	USP40	Q9NVE5	1235 aa		10.13	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	TRIM35	Q9UPQ4	493 aa		10.13	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	PHF24	Q9UPV7	400 aa		10.13	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	SPTBN4	Q9H254	2564 aa		10.13	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	ZNF521	Q96K83	1311 aa		10.12	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	SLC15A5	A6NIM6	579 aa		10.12	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	SEPT4	O43236	478 aa		10.12	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	GTPBP6	O43824	516 aa	Predicted RBP	10.12	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	GLRX3	O76003	335 aa	Known RBP	10.12	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	FAAP100	Q0VG06	881 aa		10.12	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	CAVIN4	Q5BKX8	364 aa		10.12	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	PPP2R2D	Q66LE6	453 aa		10.12	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	MFSD5	Q6N075	450 aa		10.12	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	ANKRD33	Q7Z3H0	272 aa		10.12	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.12	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	GJD3	Q8N144	294 aa		10.12	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	IDI2	Q9BXS1	227 aa		10.12	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	MYH16	Q9H6N6	1097 aa		10.12	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	TBX21	Q9UL17	535 aa		10.12	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	PRRC2B	Q5JSZ5	2229 aa	Known RBP	10.11	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	DDTL	A6NHG4	134 aa	Predicted RBP	10.11	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	ELL2	O00472	640 aa	Predicted RBP	10.11	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	NEUROD2	Q15784	382 aa		10.11	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	CCDC57	Q2TAC2	916 aa		10.11	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	CCDC30	Q5VVM6	783 aa		10.11	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	ZNF365	Q70YC5	407 aa		10.11	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	ERMP1	Q7Z2K6	904 aa		10.11	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	NPLOC4	Q8TAT6	608 aa		10.11	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	TOX2	Q96NM4	488 aa		10.11	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	PAGR1	Q9BTK6	254 aa		10.11	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	OSBPL5	Q9H0X9	879 aa	Predicted RBP	10.11	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	GBF1	Q92538	1859 aa		10.1	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	CACNA1B	Q00975	2339 aa		10.1	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	DCDC2C	A8MYV0	355 aa		10.1	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	GFRA3	O60609	400 aa		10.1	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	SLC4A2	P04920	1241 aa		10.1	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	SLC5A1	P13866	664 aa		10.1	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	PTPRE	P23469	700 aa		10.1	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	MTMR2	Q13614	643 aa		10.1	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	GRB14	Q14449	540 aa		10.1	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	FAM47A	Q5JRC9	791 aa		10.1	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	LMBR1L	Q6UX01	489 aa		10.1	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	FAM178B	Q8IXR5	827 aa		10.1	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	MTIF3	Q9H2K0	278 aa	Known RBP	10.1	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	NDUFB9	Q9Y6M9	179 aa		10.1	□□□□□ -0.79
RAPGEF4-208	ENST00000473003		A0A1W2PQ45	241 aa	Predicted RBP	10.09	□□□□□ -0.79
RAPGEF4-208	ENST00000473003		A0A1W2PQY0	241 aa		10.09	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	USP17L5	A8MUK1	530 aa		10.09	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	DCX	O43602	365 aa		10.09	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	TBC1D12	O60347	775 aa		10.09	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	ACR	P10323	421 aa		10.09	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	CSF2RA	P15509	400 aa		10.09	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	SSTR3	P32745	418 aa	Predicted RBP	10.09	□□□□□ -0.79
RAPGEF4-208	ENST00000473003	PTPN5	P54829	565 aa		10.09	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms