RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 CDK8P49336 464 aa24.78■■□□□ 1.56
TOP3A-204ENST00000472959 SREBF2Q12772 1141 aa24.78■■□□□ 1.56
TOP3A-204ENST00000472959 ZNF287Q9HBT7 754 aa24.78■■□□□ 1.56
TOP3A-204ENST00000472959 ZHX2Q9Y6X8 837 aa24.78■■□□□ 1.56
TOP3A-204ENST00000472959 OTOFQ9HC10 1997 aa24.78■■□□□ 1.56
TOP3A-204ENST00000472959 ROBO3Q96MS0 1386 aa24.78■■□□□ 1.56
TOP3A-204ENST00000472959 IRF6O14896 467 aa24.77■■□□□ 1.56
TOP3A-204ENST00000472959 GTF2A2P52657 109 aa24.77■■□□□ 1.56
TOP3A-204ENST00000472959 SLC44A5Q8NCS7 719 aa24.77■■□□□ 1.56
TOP3A-204ENST00000472959 CCDC17Q96LX7 622 aa24.77■■□□□ 1.56
TOP3A-204ENST00000472959 DSCC1Q9BVC3 393 aa24.77■■□□□ 1.56
TOP3A-204ENST00000472959 USP17L5A8MUK1 530 aa24.76■■□□□ 1.55
TOP3A-204ENST00000472959 SMIM22K7EJ46 135 aa24.76■■□□□ 1.55
TOP3A-204ENST00000472959 SGSM2O43147 1006 aa24.76■■□□□ 1.55
TOP3A-204ENST00000472959 TM4SF4P48230 202 aa24.76■■□□□ 1.55
TOP3A-204ENST00000472959 PPARAQ07869 468 aa24.76■■□□□ 1.55
TOP3A-204ENST00000472959 SNAPC2Q13487 334 aa24.76■■□□□ 1.55
TOP3A-204ENST00000472959 ABCB5Q2M3G0 1257 aa24.76■■□□□ 1.55
TOP3A-204ENST00000472959 CABP5Q9NP86 173 aa24.76■■□□□ 1.55
TOP3A-204ENST00000472959 ZBTB21Q9ULJ3 1066 aa24.76■■□□□ 1.55
TOP3A-204ENST00000472959 KCNH4Q9UQ05 1017 aa24.76■■□□□ 1.55
TOP3A-204ENST00000472959 THSD7BQ9C0I4 1608 aa24.75■■□□□ 1.55
TOP3A-204ENST00000472959 CXCL11O14625 94 aa24.75■■□□□ 1.55
TOP3A-204ENST00000472959 GDF11O95390 407 aa24.75■■□□□ 1.55
TOP3A-204ENST00000472959 CASC1Q6TDU7 716 aa24.75■■□□□ 1.55
TOP3A-204ENST00000472959 MS4A4AQ96JQ5 239 aa24.75■■□□□ 1.55
TOP3A-204ENST00000472959 ANAPC4Q9UJX5 808 aa24.75■■□□□ 1.55
TOP3A-204ENST00000472959 AFG3L2Q9Y4W6 797 aa24.75■■□□□ 1.55
TOP3A-204ENST00000472959 TESPA1A2RU30 521 aaPredicted RBP24.74■■□□□ 1.55
TOP3A-204ENST00000472959 CDC45O75419 566 aa24.74■■□□□ 1.55
TOP3A-204ENST00000472959 GH2P01242 217 aa24.74■■□□□ 1.55
TOP3A-204ENST00000472959 CETPP11597 493 aa24.74■■□□□ 1.55
TOP3A-204ENST00000472959 JAG1P78504 1218 aa24.74■■□□□ 1.55
TOP3A-204ENST00000472959 IL25Q9H293 177 aa24.74■■□□□ 1.55
TOP3A-204ENST00000472959 MKNK2Q9HBH9 465 aa24.74■■□□□ 1.55
TOP3A-204ENST00000472959 AS3MTQ9HBK9 375 aa24.74■■□□□ 1.55
TOP3A-204ENST00000472959 WBP1LQ9NX94 342 aa24.74■■□□□ 1.55
TOP3A-204ENST00000472959 BAZ2AQ9UIF9 1905 aaKnown RBP24.73■■□□□ 1.55
TOP3A-204ENST00000472959 PDE4BQ07343 736 aa24.73■■□□□ 1.55
TOP3A-204ENST00000472959 ZNF280CQ8ND82 737 aa24.73■■□□□ 1.55
TOP3A-204ENST00000472959 BEGAINQ9BUH8 593 aa24.73■■□□□ 1.55
TOP3A-204ENST00000472959 WDR18Q9BV38 432 aa24.73■■□□□ 1.55
TOP3A-204ENST00000472959 CTNNA3Q9UI47 895 aa24.73■■□□□ 1.55
TOP3A-204ENST00000472959 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.72■■□□□ 1.55
TOP3A-204ENST00000472959 CCL15-CCL14A0A0B4J2E2 113 aa24.71■■□□□ 1.55
TOP3A-204ENST00000472959 MPHOSPH10O00566 681 aaKnown RBP24.71■■□□□ 1.55
TOP3A-204ENST00000472959 CCL15Q16663 113 aa24.71■■□□□ 1.55
TOP3A-204ENST00000472959 TMEM179Q6ZVK1 233 aa24.71■■□□□ 1.55
TOP3A-204ENST00000472959 ESYT1Q9BSJ8 1104 aa24.71■■□□□ 1.55
TOP3A-204ENST00000472959 CA12O43570 354 aa24.7■■□□□ 1.54
TOP3A-204ENST00000472959 SPP2Q13103 211 aa24.7■■□□□ 1.54
TOP3A-204ENST00000472959 RAB3GAP1Q15042 981 aa24.7■■□□□ 1.54
TOP3A-204ENST00000472959 SHROOM1Q2M3G4 852 aaPredicted RBP24.7■■□□□ 1.54
TOP3A-204ENST00000472959 OTUD7BQ6GQQ9 843 aa24.7■■□□□ 1.54
TOP3A-204ENST00000472959 KIAA1211Q6ZU35 1233 aa24.7■■□□□ 1.54
TOP3A-204ENST00000472959 CCDC84Q86UT8 332 aaPredicted RBP24.7■■□□□ 1.54
TOP3A-204ENST00000472959 IFNL1Q8IU54 200 aa24.7■■□□□ 1.54
TOP3A-204ENST00000472959 ZNF444Q8N0Y2 327 aaPredicted RBP24.7■■□□□ 1.54
TOP3A-204ENST00000472959 STK11IPQ8N1F8 1099 aa24.7■■□□□ 1.54
TOP3A-204ENST00000472959 BRI3BPQ8WY22 251 aa24.7■■□□□ 1.54
TOP3A-204ENST00000472959 DOCK1Q14185 1865 aa24.7■■□□□ 1.54
TOP3A-204ENST00000472959 A0A0G2JLL6 359 aaPredicted RBP24.69■■□□□ 1.54
TOP3A-204ENST00000472959 TRIM75PA6NK02 468 aa24.69■■□□□ 1.54
TOP3A-204ENST00000472959 ALDH1A1P00352 501 aa24.69■■□□□ 1.54
TOP3A-204ENST00000472959 AKR1B1P15121 316 aa24.69■■□□□ 1.54
TOP3A-204ENST00000472959 RASA1P20936 1047 aa24.69■■□□□ 1.54
TOP3A-204ENST00000472959 FASTKD5Q7L8L6 764 aaKnown RBP24.69■■□□□ 1.54
TOP3A-204ENST00000472959 PRRT2Q7Z6L0 340 aaPredicted RBP24.69■■□□□ 1.54
TOP3A-204ENST00000472959 ZNF213O14771 459 aa24.68■■□□□ 1.54
TOP3A-204ENST00000472959 FGRP09769 529 aa24.68■■□□□ 1.54
TOP3A-204ENST00000472959 PCP11498 1178 aaKnown RBP24.68■■□□□ 1.54
TOP3A-204ENST00000472959 GUCY1A2P33402 732 aa24.68■■□□□ 1.54
TOP3A-204ENST00000472959 CTDSPL2Q05D32 466 aa24.68■■□□□ 1.54
TOP3A-204ENST00000472959 SAGE1Q9NXZ1 904 aa24.68■■□□□ 1.54
TOP3A-204ENST00000472959 SEPT2Q15019 361 aa24.67■■□□□ 1.54
TOP3A-204ENST00000472959 IMMTQ16891 758 aaKnown RBP24.67■■□□□ 1.54
TOP3A-204ENST00000472959 PTPN18Q99952 460 aa24.67■■□□□ 1.54
TOP3A-204ENST00000472959 RNF186Q9NXI6 227 aa24.67■■□□□ 1.54
TOP3A-204ENST00000472959 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.67■■□□□ 1.54
TOP3A-204ENST00000472959 U3KPZ7 1027 aaPredicted RBP24.67■■□□□ 1.54
TOP3A-204ENST00000472959 C19orf81C9J6K1 198 aa24.66■■□□□ 1.54
TOP3A-204ENST00000472959 USP17L10C9JJH3 530 aa24.66■■□□□ 1.54
TOP3A-204ENST00000472959 ORC4O43929 436 aa24.66■■□□□ 1.54
TOP3A-204ENST00000472959 PRDM1O75626 825 aa24.66■■□□□ 1.54
TOP3A-204ENST00000472959 HSPA1AP0DMV8 641 aaKnown RBP24.66■■□□□ 1.54
TOP3A-204ENST00000472959 HSPA1BP0DMV9 641 aaKnown RBP24.66■■□□□ 1.54
TOP3A-204ENST00000472959 BACE1P56817 501 aa24.66■■□□□ 1.54
TOP3A-204ENST00000472959 PTH1RQ03431 593 aa24.66■■□□□ 1.54
TOP3A-204ENST00000472959 RNF41Q9H4P4 317 aaPredicted RBP24.66■■□□□ 1.54
TOP3A-204ENST00000472959 KANSL2Q9H9L4 492 aa24.66■■□□□ 1.54
TOP3A-204ENST00000472959 ZCCHC17Q9NP64 241 aaKnown RBP24.66■■□□□ 1.54
TOP3A-204ENST00000472959 IGF2BP3O00425 579 aaKnown RBP eCLIP24.65■■□□□ 1.54
TOP3A-204ENST00000472959 HAND2P61296 217 aa24.65■■□□□ 1.54
TOP3A-204ENST00000472959 MOGSQ13724 837 aa24.65■■□□□ 1.54
TOP3A-204ENST00000472959 SH3D19Q5HYK7 790 aa24.65■■□□□ 1.54
TOP3A-204ENST00000472959 AKNAD1Q5T1N1 836 aa24.65■■□□□ 1.54
TOP3A-204ENST00000472959 ANKRD23Q86SG2 305 aa24.65■■□□□ 1.54
TOP3A-204ENST00000472959 MAP4K1Q92918 833 aa24.65■■□□□ 1.54
TOP3A-204ENST00000472959 NT5C2P49902 561 aa24.64■■□□□ 1.54
TOP3A-204ENST00000472959 MTMR2Q13614 643 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms