RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 NT5C2P49902 561 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 METAP2P50579 478 aaKnown RBP eCLIP8.88□□□□□ -0.99
CCDC171-205ENST00000472806 PIP4K2BP78356 416 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 CHRNDQ07001 517 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 RASGRF1Q13972 1273 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 TRIM29Q14134 588 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 PPP2R5BQ15173 497 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 GIMAP6Q6P9H5 292 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 PI16Q6UXB8 463 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.88□□□□□ -0.99
CCDC171-205ENST00000472806 NFXL1Q6ZNB6 911 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 SULF1Q8IWU6 871 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 IFNL3Q8IZI9 196 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 MAGEB6Q8N7X4 407 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 HELBQ8NG08 1087 aaPredicted RBP8.88□□□□□ -0.99
CCDC171-205ENST00000472806 FAM200AQ8TCP9 573 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 KCNG4Q8TDN1 519 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 FUCA2Q9BTY2 467 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 BSDC1Q9NW68 430 aaPredicted RBP8.88□□□□□ -0.99
CCDC171-205ENST00000472806 DACT1Q9NYF0 836 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 LRP2BPQ9P2M1 347 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 TFIP11Q9UBB9 837 aaKnown RBP8.88□□□□□ -0.99
CCDC171-205ENST00000472806 ORC3Q9UBD5 711 aaPredicted RBP8.88□□□□□ -0.99
CCDC171-205ENST00000472806 WWC3Q9ULE0 1092 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 ZKSCAN5Q9Y2L8 839 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 DOCK2Q92608 1830 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 SCN7AQ01118 1682 aa8.88□□□□□ -0.99
CCDC171-205ENST00000472806 STK36Q9NRP7 1315 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 CCDC69A6NI79 296 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 FOXP2O15409 715 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 ZBTB43O43298 467 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 KINO60870 393 aaKnown RBP8.87□□□□□ -0.99
CCDC171-205ENST00000472806 RPS6KA4O75676 772 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 MBD4O95243 580 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 YEATS4O95619 227 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 AVPP01185 164 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 TYRO3Q06418 890 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 KIAA2012Q0VF49 1180 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 COL9A3Q14050 684 aaPredicted RBP8.87□□□□□ -0.99
CCDC171-205ENST00000472806 SF3A1Q15459 793 aaKnown RBP8.87□□□□□ -0.99
CCDC171-205ENST00000472806 TMEM67Q5HYA8 995 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 AKNAD1Q5T1N1 836 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 RBM43Q6ZSC3 357 aaKnown RBP8.87□□□□□ -0.99
CCDC171-205ENST00000472806 MFSD6Q6ZSS7 791 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 CHST3Q7LGC8 479 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 SGMS1Q86VZ5 419 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 VPS37DQ86XT2 251 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 CYP4X1Q8N118 509 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 FNBP4Q8N3X1 1017 aaPredicted RBP8.87□□□□□ -0.99
CCDC171-205ENST00000472806 JMYQ8N9B5 988 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 STAG1Q8WVM7 1258 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 NLRP3Q96P20 1036 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 SETDB2Q96T68 719 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 SEC31BQ9NQW1 1179 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 RTEL1Q9NZ71 1219 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 USP25Q9UHP3 1055 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 NARFQ9UHQ1 456 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 TIAM2Q8IVF5 1701 aa8.87□□□□□ -0.99
CCDC171-205ENST00000472806 ZNF804BA4D1E1 1349 aa8.86□□□□□ -0.99
CCDC171-205ENST00000472806 MYH15Q9Y2K3 1946 aa8.86□□□□□ -0.99
CCDC171-205ENST00000472806 A0A1W2PQ27 194 aa8.86□□□□□ -0.99
CCDC171-205ENST00000472806 A0A1W2PQ64 194 aa8.86□□□□□ -0.99
CCDC171-205ENST00000472806 A0A1W2PQD8 194 aa8.86□□□□□ -0.99
CCDC171-205ENST00000472806 ZNF500O60304 480 aaPredicted RBP8.86□□□□□ -0.99
CCDC171-205ENST00000472806 CD46P15529 392 aa8.86□□□□□ -0.99
CCDC171-205ENST00000472806 LIG1P18858 919 aa8.86□□□□□ -0.99
CCDC171-205ENST00000472806 ANTXR2P58335 489 aa8.86□□□□□ -0.99
CCDC171-205ENST00000472806 GUCA2AQ02747 115 aa8.86□□□□□ -0.99
CCDC171-205ENST00000472806 GNL2Q13823 731 aaKnown RBP8.86□□□□□ -0.99
CCDC171-205ENST00000472806 STK38Q15208 465 aa8.86□□□□□ -0.99
CCDC171-205ENST00000472806 ZRSR1Q15695 479 aaKnown RBP8.86□□□□□ -0.99
CCDC171-205ENST00000472806 TPRNQ4KMQ1 711 aa8.86□□□□□ -0.99
CCDC171-205ENST00000472806 FAM173BQ6P4H8 233 aa8.86□□□□□ -0.99
CCDC171-205ENST00000472806 TPTE2Q6XPS3 522 aa8.86□□□□□ -0.99
CCDC171-205ENST00000472806 CCAR1Q8IX12 1150 aaKnown RBP8.86□□□□□ -0.99
CCDC171-205ENST00000472806 TRIM22Q8IYM9 498 aa8.86□□□□□ -0.99
CCDC171-205ENST00000472806 LINC00116Q8NCU8 138 aa8.86□□□□□ -0.99
CCDC171-205ENST00000472806 FBXO18Q8NFZ0 1043 aa8.86□□□□□ -0.99
CCDC171-205ENST00000472806 NCOA5Q9HCD5 579 aaKnown RBP8.86□□□□□ -0.99
CCDC171-205ENST00000472806 POLR3EQ9NVU0 708 aa8.86□□□□□ -0.99
CCDC171-205ENST00000472806 SLC12A7Q9Y666 1083 aa8.86□□□□□ -0.99
CCDC171-205ENST00000472806 SLC4A4Q9Y6R1 1079 aa8.86□□□□□ -0.99
CCDC171-205ENST00000472806 NID2Q14112 1375 aa8.86□□□□□ -0.99
CCDC171-205ENST00000472806 NHSQ6T4R5 1651 aa8.85□□□□□ -0.99
CCDC171-205ENST00000472806 MAGEB6P1A0A0J9YX57 407 aa8.85□□□□□ -0.99
CCDC171-205ENST00000472806 GOLGA8AA7E2F4 631 aa8.85□□□□□ -0.99
CCDC171-205ENST00000472806 UBAP1LF5GYI3 381 aa8.85□□□□□ -0.99
CCDC171-205ENST00000472806 IFIT3O14879 490 aaKnown RBP8.85□□□□□ -0.99
CCDC171-205ENST00000472806 ADCY5O95622 1261 aa8.85□□□□□ -0.99
CCDC171-205ENST00000472806 CYP7A1P22680 504 aa8.85□□□□□ -0.99
CCDC171-205ENST00000472806 IARSP41252 1262 aaKnown RBP8.85□□□□□ -0.99
CCDC171-205ENST00000472806 ME1P48163 572 aa8.85□□□□□ -0.99
CCDC171-205ENST00000472806 FAM160A1Q05DH4 1040 aa8.85□□□□□ -0.99
CCDC171-205ENST00000472806 SSRP1Q08945 709 aaKnown RBP8.85□□□□□ -0.99
CCDC171-205ENST00000472806 WTAPQ15007 396 aa8.85□□□□□ -0.99
CCDC171-205ENST00000472806 SAFBQ15424 915 aaKnown RBP eCLIP8.85□□□□□ -0.99
CCDC171-205ENST00000472806 STX1AQ16623 288 aa8.85□□□□□ -0.99
CCDC171-205ENST00000472806 ERFEQ4G0M1 354 aa8.85□□□□□ -0.99
CCDC171-205ENST00000472806 MSS51Q4VC12 460 aa8.85□□□□□ -0.99
CCDC171-205ENST00000472806 ADALQ6DHV7 355 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms