RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 SIPA1L1O43166 1804 aa11.2□□□□□ -0.62
SMC4-213ENST00000472282 RBBP6Q7Z6E9 1792 aaKnown RBP11.19□□□□□ -0.62
SMC4-213ENST00000472282 TESPA1A2RU30 521 aaPredicted RBP11.19□□□□□ -0.62
SMC4-213ENST00000472282 FKTNO75072 461 aa11.19□□□□□ -0.62
SMC4-213ENST00000472282 LDHBP07195 334 aaKnown RBP11.19□□□□□ -0.62
SMC4-213ENST00000472282 SLURP2P0DP57 97 aa11.19□□□□□ -0.62
SMC4-213ENST00000472282 TCP10Q12799 353 aa11.19□□□□□ -0.62
SMC4-213ENST00000472282 CRHR2Q13324 411 aa11.19□□□□□ -0.62
SMC4-213ENST00000472282 TNNI3KQ59H18 835 aa11.19□□□□□ -0.62
SMC4-213ENST00000472282 SWT1Q5T5J6 900 aaKnown RBP11.19□□□□□ -0.62
SMC4-213ENST00000472282 FKBP1CQ5VVH2 108 aa11.19□□□□□ -0.62
SMC4-213ENST00000472282 PI16Q6UXB8 463 aa11.19□□□□□ -0.62
SMC4-213ENST00000472282 MIGA2Q7L4E1 593 aa11.19□□□□□ -0.62
SMC4-213ENST00000472282 ZFPM1Q8IX07 1006 aa11.19□□□□□ -0.62
SMC4-213ENST00000472282 RHPN1Q8TCX5 695 aa11.19□□□□□ -0.62
SMC4-213ENST00000472282 BRI3BPQ8WY22 251 aa11.19□□□□□ -0.62
SMC4-213ENST00000472282 ZKSCAN4Q969J2 545 aaPredicted RBP11.19□□□□□ -0.62
SMC4-213ENST00000472282 NEUROD6Q96NK8 337 aa11.19□□□□□ -0.62
SMC4-213ENST00000472282 PRR14Q9BWN1 585 aa11.19□□□□□ -0.62
SMC4-213ENST00000472282 DCTPP1Q9H773 170 aa11.19□□□□□ -0.62
SMC4-213ENST00000472282 IL1RAPL2Q9NP60 686 aa11.19□□□□□ -0.62
SMC4-213ENST00000472282 TMOD2Q9NZR1 351 aa11.19□□□□□ -0.62
SMC4-213ENST00000472282 DENND2AQ9ULE3 1009 aa11.19□□□□□ -0.62
SMC4-213ENST00000472282 FPGT-TNNI3KV9GXZ4 949 aa11.19□□□□□ -0.62
SMC4-213ENST00000472282 MGAMO43451 1857 aa11.19□□□□□ -0.62
SMC4-213ENST00000472282 RFX7Q2KHR2 1363 aa11.18□□□□□ -0.62
SMC4-213ENST00000472282 SEMA3EO15041 775 aa11.18□□□□□ -0.62
SMC4-213ENST00000472282 RAB11FIP3O75154 756 aa11.18□□□□□ -0.62
SMC4-213ENST00000472282 INPP5BP32019 993 aa11.18□□□□□ -0.62
SMC4-213ENST00000472282 INHBEP58166 350 aa11.18□□□□□ -0.62
SMC4-213ENST00000472282 MLLT1Q03111 559 aaPredicted RBP11.18□□□□□ -0.62
SMC4-213ENST00000472282 ZNF384Q8TF68 577 aa11.18□□□□□ -0.62
SMC4-213ENST00000472282 FAM151AQ8WW52 585 aa11.18□□□□□ -0.62
SMC4-213ENST00000472282 KIF1BPQ96EK5 621 aa11.18□□□□□ -0.62
SMC4-213ENST00000472282 WRNIP1Q96S55 665 aa11.18□□□□□ -0.62
SMC4-213ENST00000472282 BCL11AQ9H165 835 aa11.18□□□□□ -0.62
SMC4-213ENST00000472282 GPR108Q9NPR9 543 aa11.18□□□□□ -0.62
SMC4-213ENST00000472282 GNL3LQ9NVN8 582 aaKnown RBP11.18□□□□□ -0.62
SMC4-213ENST00000472282 GAKO14976 1311 aa11.17□□□□□ -0.62
SMC4-213ENST00000472282 CCL15-CCL14A0A0B4J2E2 113 aa11.17□□□□□ -0.62
SMC4-213ENST00000472282 SPDYE5A6NIY4 337 aa11.17□□□□□ -0.62
SMC4-213ENST00000472282 ALDH1A1P00352 501 aa11.17□□□□□ -0.62
SMC4-213ENST00000472282 NEFLP07196 543 aa11.17□□□□□ -0.62
SMC4-213ENST00000472282 GGCXP38435 758 aa11.17□□□□□ -0.62
SMC4-213ENST00000472282 HDAC1Q13547 482 aaPredicted RBP11.17□□□□□ -0.62
SMC4-213ENST00000472282 CCL15Q16663 113 aa11.17□□□□□ -0.62
SMC4-213ENST00000472282 AACSQ86V21 672 aa11.17□□□□□ -0.62
SMC4-213ENST00000472282 FAM43AQ8N2R8 423 aa11.17□□□□□ -0.62
SMC4-213ENST00000472282 EAF2Q96CJ1 260 aaPredicted RBP11.17□□□□□ -0.62
SMC4-213ENST00000472282 DBNDD2Q9BQY9 259 aa11.17□□□□□ -0.62
SMC4-213ENST00000472282 CCDC8Q9H0W5 538 aaPredicted RBP11.17□□□□□ -0.62
SMC4-213ENST00000472282 USP40Q9NVE5 1235 aa11.17□□□□□ -0.62
SMC4-213ENST00000472282 TLR7Q9NYK1 1049 aaKnown RBP11.17□□□□□ -0.62
SMC4-213ENST00000472282 HMG20BQ9P0W2 317 aa11.17□□□□□ -0.62
SMC4-213ENST00000472282 ABCF2Q9UG63 623 aa11.17□□□□□ -0.62
SMC4-213ENST00000472282 CSADQ9Y600 493 aa11.17□□□□□ -0.62
SMC4-213ENST00000472282 ATRNL1Q5VV63 1379 aa11.16□□□□□ -0.62
SMC4-213ENST00000472282 IRF6O14896 467 aa11.16□□□□□ -0.62
SMC4-213ENST00000472282 SMARCA5O60264 1052 aaPredicted RBP11.16□□□□□ -0.62
SMC4-213ENST00000472282 GORABQ5T7V8 394 aa11.16□□□□□ -0.62
SMC4-213ENST00000472282 PPP1R18Q6NYC8 613 aa11.16□□□□□ -0.62
SMC4-213ENST00000472282 TBC1D9Q6ZT07 1266 aa11.16□□□□□ -0.62
SMC4-213ENST00000472282 SH3BP5LQ7L8J4 393 aa11.16□□□□□ -0.62
SMC4-213ENST00000472282 CD99L2Q8TCZ2 262 aa11.16□□□□□ -0.62
SMC4-213ENST00000472282 ZNF341Q9BYN7 854 aa11.16□□□□□ -0.62
SMC4-213ENST00000472282 PRKD2Q9BZL6 878 aa11.16□□□□□ -0.62
SMC4-213ENST00000472282 LRRCC1Q9C099 1032 aa11.16□□□□□ -0.62
SMC4-213ENST00000472282 DDX4Q9NQI0 724 aaKnown RBP11.16□□□□□ -0.62
SMC4-213ENST00000472282 DBNLQ9UJU6 430 aaKnown RBP11.16□□□□□ -0.62
SMC4-213ENST00000472282 PDS5AQ29RF7 1337 aaKnown RBP11.15□□□□□ -0.62
SMC4-213ENST00000472282 IGHDP01880 384 aa11.15□□□□□ -0.62
SMC4-213ENST00000472282 MCAMP43121 646 aa11.15□□□□□ -0.62
SMC4-213ENST00000472282 RGS3P49796 1198 aa11.15□□□□□ -0.62
SMC4-213ENST00000472282 MECOMQ03112 1051 aa11.15□□□□□ -0.62
SMC4-213ENST00000472282 PKN2Q16513 984 aaKnown RBP11.15□□□□□ -0.62
SMC4-213ENST00000472282 FBXO46Q6PJ61 603 aaPredicted RBP11.15□□□□□ -0.62
SMC4-213ENST00000472282 OTOP1Q7RTM1 612 aa11.15□□□□□ -0.62
SMC4-213ENST00000472282 ERO1BQ86YB8 467 aa11.15□□□□□ -0.62
SMC4-213ENST00000472282 CLASRPQ8N2M8 674 aaKnown RBP11.15□□□□□ -0.62
SMC4-213ENST00000472282 RWDD1Q9H446 243 aaPredicted RBP11.15□□□□□ -0.62
SMC4-213ENST00000472282 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.15□□□□□ -0.62
SMC4-213ENST00000472282 ZNF112Q9UJU3 913 aa11.15□□□□□ -0.62
SMC4-213ENST00000472282 TRIM17Q9Y577 477 aa11.15□□□□□ -0.62
SMC4-213ENST00000472282 V9GY48 417 aaPredicted RBP11.15□□□□□ -0.62
SMC4-213ENST00000472282 MYH1P12882 1939 aa11.15□□□□□ -0.62
SMC4-213ENST00000472282 MROH7-TTC4A0A0A0MT08 1334 aa11.14□□□□□ -0.63
SMC4-213ENST00000472282 DDTLA6NHG4 134 aaPredicted RBP11.14□□□□□ -0.63
SMC4-213ENST00000472282 BTBD19C9JJ37 291 aa11.14□□□□□ -0.63
SMC4-213ENST00000472282 GFRA3O60609 400 aa11.14□□□□□ -0.63
SMC4-213ENST00000472282 WDHD1O75717 1129 aaPredicted RBP11.14□□□□□ -0.63
SMC4-213ENST00000472282 ARID4AP29374 1257 aaPredicted RBP11.14□□□□□ -0.63
SMC4-213ENST00000472282 BTDP43251 543 aa11.14□□□□□ -0.63
SMC4-213ENST00000472282 GTF2A2P52657 109 aa11.14□□□□□ -0.63
SMC4-213ENST00000472282 RHBDL3P58872 404 aa11.14□□□□□ -0.63
SMC4-213ENST00000472282 TAF1CQ15572 869 aaPredicted RBP11.14□□□□□ -0.63
SMC4-213ENST00000472282 DCAF15Q66K64 600 aa11.14□□□□□ -0.63
SMC4-213ENST00000472282 DZIP1Q86YF9 867 aaKnown RBP11.14□□□□□ -0.63
SMC4-213ENST00000472282 ZGPATQ8N5A5 531 aaKnown RBP11.14□□□□□ -0.63
SMC4-213ENST00000472282 SPATA5Q8NB90 893 aa11.14□□□□□ -0.63
SMC4-213ENST00000472282 ZNF516Q92618 1163 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms