RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 DYNC1LI2O43237 492 aaPredicted RBP9.7□□□□□ -0.86
SCN9A-206ENST00000472119 ASPAP45381 313 aa9.7□□□□□ -0.86
SCN9A-206ENST00000472119 MESP2Q0VG99 397 aa9.7□□□□□ -0.86
SCN9A-206ENST00000472119 PLD6Q8N2A8 252 aaKnown RBP9.7□□□□□ -0.86
SCN9A-206ENST00000472119 PI4K2BQ8TCG2 481 aa9.7□□□□□ -0.86
SCN9A-206ENST00000472119 SLC26A8Q96RN1 970 aa9.7□□□□□ -0.86
SCN9A-206ENST00000472119 RPGRIP1LQ68CZ1 1315 aa9.7□□□□□ -0.86
SCN9A-206ENST00000472119 SPATA31E1Q6ZUB1 1445 aa9.7□□□□□ -0.86
SCN9A-206ENST00000472119 MYO5BQ9ULV0 1848 aa9.7□□□□□ -0.86
SCN9A-206ENST00000472119 LRRC10BA6NIK2 292 aa9.69□□□□□ -0.86
SCN9A-206ENST00000472119 EREGO14944 169 aa9.69□□□□□ -0.86
SCN9A-206ENST00000472119 MAOBP27338 520 aa9.69□□□□□ -0.86
SCN9A-206ENST00000472119 KDM5AP29375 1690 aaKnown RBP9.69□□□□□ -0.86
SCN9A-206ENST00000472119 CYP27C1Q4G0S4 372 aa9.69□□□□□ -0.86
SCN9A-206ENST00000472119 NEURL4Q96JN8 1562 aa9.69□□□□□ -0.86
SCN9A-206ENST00000472119 NRSN2Q9GZP1 204 aa9.69□□□□□ -0.86
SCN9A-206ENST00000472119 MED14O60244 1454 aa9.68□□□□□ -0.86
SCN9A-206ENST00000472119 EIF4EBP3O60516 100 aaPredicted RBP9.68□□□□□ -0.86
SCN9A-206ENST00000472119 CTSBP07858 339 aa9.68□□□□□ -0.86
SCN9A-206ENST00000472119 EDN3P14138 238 aa9.68□□□□□ -0.86
SCN9A-206ENST00000472119 CD96P40200 585 aa9.68□□□□□ -0.86
SCN9A-206ENST00000472119 LILRA6Q6PI73 481 aa9.68□□□□□ -0.86
SCN9A-206ENST00000472119 SEZ6L2Q6UXD5 910 aa9.68□□□□□ -0.86
SCN9A-206ENST00000472119 NETO1Q8TDF5 533 aa9.68□□□□□ -0.86
SCN9A-206ENST00000472119 TOX2Q96NM4 488 aa9.68□□□□□ -0.86
SCN9A-206ENST00000472119 BHLHE41Q9C0J9 482 aaPredicted RBP9.68□□□□□ -0.86
SCN9A-206ENST00000472119 KIF1BO60333 1816 aa9.68□□□□□ -0.86
SCN9A-206ENST00000472119 PLEKHG1Q9ULL1 1385 aa9.67□□□□□ -0.86
SCN9A-206ENST00000472119 ADGRF5Q8IZF2 1346 aa9.67□□□□□ -0.86
SCN9A-206ENST00000472119 ZNF335Q9H4Z2 1342 aaPredicted RBP9.67□□□□□ -0.86
SCN9A-206ENST00000472119 FAM181AQ8N9Y4 354 aa9.67□□□□□ -0.86
SCN9A-206ENST00000472119 METTL12A8MUP2 240 aa9.66□□□□□ -0.86
SCN9A-206ENST00000472119 PDGFAP04085 211 aa9.66□□□□□ -0.86
SCN9A-206ENST00000472119 RAP1GAPP47736 663 aa9.66□□□□□ -0.86
SCN9A-206ENST00000472119 POU4F3Q15319 338 aa9.66□□□□□ -0.86
SCN9A-206ENST00000472119 HP1BP3Q5SSJ5 553 aaPredicted RBP9.66□□□□□ -0.86
SCN9A-206ENST00000472119 BHLHE22Q8NFJ8 381 aaPredicted RBP9.66□□□□□ -0.86
SCN9A-206ENST00000472119 NEXMIFQ5QGS0 1516 aa9.66□□□□□ -0.86
SCN9A-206ENST00000472119 POLR1AO95602 1720 aaPredicted RBP9.65□□□□□ -0.86
SCN9A-206ENST00000472119 NCANO14594 1321 aa9.65□□□□□ -0.86
SCN9A-206ENST00000472119 PRRG2O14669 202 aa9.65□□□□□ -0.86
SCN9A-206ENST00000472119 CFPP27918 469 aa9.65□□□□□ -0.86
SCN9A-206ENST00000472119 ELOAQ14241 798 aaKnown RBP9.65□□□□□ -0.86
SCN9A-206ENST00000472119 TBX22Q9Y458 520 aa9.65□□□□□ -0.86
SCN9A-206ENST00000472119 IQGAP1P46940 1657 aa9.64□□□□□ -0.87
SCN9A-206ENST00000472119 PHACTR2O75167 634 aa9.64□□□□□ -0.87
SCN9A-206ENST00000472119 CYP11A1P05108 521 aa9.64□□□□□ -0.87
SCN9A-206ENST00000472119 MLANAQ16655 118 aa9.64□□□□□ -0.87
SCN9A-206ENST00000472119 CILP2Q8IUL8 1156 aa9.64□□□□□ -0.87
SCN9A-206ENST00000472119 ZSCAN18Q8TBC5 510 aaPredicted RBP9.64□□□□□ -0.87
SCN9A-206ENST00000472119 LATS2Q9NRM7 1088 aa9.64□□□□□ -0.87
SCN9A-206ENST00000472119 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.64□□□□□ -0.87
SCN9A-206ENST00000472119 SEPT3Q9UH03 358 aa9.64□□□□□ -0.87
SCN9A-206ENST00000472119 VAV3Q9UKW4 847 aa9.64□□□□□ -0.87
SCN9A-206ENST00000472119 ADAMTS13Q76LX8 1427 aa9.64□□□□□ -0.87
SCN9A-206ENST00000472119 B8ZZF3 427 aa9.62□□□□□ -0.87
SCN9A-206ENST00000472119 FAM87AP0C7U9 286 aa9.62□□□□□ -0.87
SCN9A-206ENST00000472119 KCNA6P17658 529 aa9.62□□□□□ -0.87
SCN9A-206ENST00000472119 PRKCQQ04759 706 aa9.62□□□□□ -0.87
SCN9A-206ENST00000472119 PCDH1Q08174 1060 aa9.62□□□□□ -0.87
SCN9A-206ENST00000472119 CDK5R2Q13319 367 aa9.61□□□□□ -0.87
SCN9A-206ENST00000472119 TMEM132EQ6IEE7 984 aa9.61□□□□□ -0.87
SCN9A-206ENST00000472119 LCNL1Q6ZST4 164 aa9.61□□□□□ -0.87
SCN9A-206ENST00000472119 ZSWIM9Q86XI8 627 aa9.61□□□□□ -0.87
SCN9A-206ENST00000472119 GSX1Q9H4S2 264 aaPredicted RBP9.61□□□□□ -0.87
SCN9A-206ENST00000472119 AMOTL2Q9Y2J4 779 aa9.61□□□□□ -0.87
SCN9A-206ENST00000472119 METP08581 1390 aa9.61□□□□□ -0.87
SCN9A-206ENST00000472119 PPLO60437 1756 aa9.6□□□□□ -0.87
SCN9A-206ENST00000472119 ECEL1O95672 775 aa9.6□□□□□ -0.87
SCN9A-206ENST00000472119 MZF1P28698 734 aaPredicted RBP9.6□□□□□ -0.87
SCN9A-206ENST00000472119 AOC3Q16853 763 aa9.6□□□□□ -0.87
SCN9A-206ENST00000472119 NOM1Q5C9Z4 860 aaKnown RBP9.6□□□□□ -0.87
SCN9A-206ENST00000472119 PEAR1Q5VY43 1037 aaPredicted RBP9.6□□□□□ -0.87
SCN9A-206ENST00000472119 LRRC56Q8IYG6 542 aaPredicted RBP9.6□□□□□ -0.87
SCN9A-206ENST00000472119 CORO1BQ9BR76 489 aa9.6□□□□□ -0.87
SCN9A-206ENST00000472119 C14orf93Q9H972 538 aaKnown RBP9.6□□□□□ -0.87
SCN9A-206ENST00000472119 ZFYVE1Q9HBF4 777 aa9.6□□□□□ -0.87
SCN9A-206ENST00000472119 FAM53CQ9NYF3 392 aa9.6□□□□□ -0.87
SCN9A-206ENST00000472119 SETBP1Q9Y6X0 1596 aa9.59□□□□□ -0.87
SCN9A-206ENST00000472119 PIK3C2GO75747 1445 aa9.59□□□□□ -0.87
SCN9A-206ENST00000472119 TNFRSF21O75509 655 aa9.59□□□□□ -0.87
SCN9A-206ENST00000472119 KCNMB1Q16558 191 aa9.59□□□□□ -0.87
SCN9A-206ENST00000472119 ZNF423Q2M1K9 1284 aa9.59□□□□□ -0.87
SCN9A-206ENST00000472119 ARHGAP27Q6ZUM4 889 aa9.59□□□□□ -0.87
SCN9A-206ENST00000472119 C1QL4Q86Z23 238 aa9.59□□□□□ -0.87
SCN9A-206ENST00000472119 SNX29Q8TEQ0 813 aa9.59□□□□□ -0.87
SCN9A-206ENST00000472119 HRASLS5Q96KN8 279 aa9.59□□□□□ -0.87
SCN9A-206ENST00000472119 CLEC4MQ9H2X3 399 aaPredicted RBP9.59□□□□□ -0.87
SCN9A-206ENST00000472119 STK26Q9P289 416 aa9.59□□□□□ -0.87
SCN9A-206ENST00000472119 FOXD3Q9UJU5 478 aaPredicted RBP9.59□□□□□ -0.87
SCN9A-206ENST00000472119 LTBP4Q8N2S1 1624 aa9.59□□□□□ -0.87
SCN9A-206ENST00000472119 TONSLQ96HA7 1378 aa9.59□□□□□ -0.87
SCN9A-206ENST00000472119 NRXN3Q9Y4C0 1643 aa9.59□□□□□ -0.87
SCN9A-206ENST00000472119 CLSPNQ9HAW4 1339 aa9.58□□□□□ -0.88
SCN9A-206ENST00000472119 PTPRUQ92729 1446 aa9.58□□□□□ -0.88
SCN9A-206ENST00000472119 ALKQ9UM73 1620 aa9.58□□□□□ -0.88
SCN9A-206ENST00000472119 IFI16Q16666 785 aaKnown RBP9.58□□□□□ -0.88
SCN9A-206ENST00000472119 TMEM164Q5U3C3 297 aa9.58□□□□□ -0.88
SCN9A-206ENST00000472119 U3KQE9 123 aa9.58□□□□□ -0.88
SCN9A-206ENST00000472119 MYOM2P54296 1465 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms