RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 UNC80Q8N2C7 3258 aa11.3□□□□□ -0.6
CCDC171-204ENST00000470191 LTBP2Q14767 1821 aa11.3□□□□□ -0.6
CCDC171-204ENST00000470191 GPR75-ASB3A0A0A6YYF3 556 aa11.29□□□□□ -0.6
CCDC171-204ENST00000470191 CNGA1P29973 690 aa11.29□□□□□ -0.6
CCDC171-204ENST00000470191 HERVK_113P62684 666 aa11.29□□□□□ -0.6
CCDC171-204ENST00000470191 JAG1P78504 1218 aa11.29□□□□□ -0.6
CCDC171-204ENST00000470191 TFCP2Q12800 502 aa11.29□□□□□ -0.6
CCDC171-204ENST00000470191 Q3C1V9 767 aa11.29□□□□□ -0.6
CCDC171-204ENST00000470191 GORABQ5T7V8 394 aa11.29□□□□□ -0.6
CCDC171-204ENST00000470191 MAP3K21Q5TCX8 1036 aa11.29□□□□□ -0.6
CCDC171-204ENST00000470191 WDR78Q5VTH9 848 aa11.29□□□□□ -0.6
CCDC171-204ENST00000470191 GPRC5AQ8NFJ5 357 aa11.29□□□□□ -0.6
CCDC171-204ENST00000470191 FAM163AQ96GL9 167 aaPredicted RBP11.29□□□□□ -0.6
CCDC171-204ENST00000470191 XAGE2Q96GT9 111 aa11.29□□□□□ -0.6
CCDC171-204ENST00000470191 PORCNQ9H237 461 aa11.29□□□□□ -0.6
CCDC171-204ENST00000470191 FOCADQ5VW36 1801 aa11.28□□□□□ -0.6
CCDC171-204ENST00000470191 A0A1B0GUL7 405 aa11.28□□□□□ -0.6
CCDC171-204ENST00000470191 GDF11O95390 407 aa11.28□□□□□ -0.6
CCDC171-204ENST00000470191 LDHCP07864 332 aa11.28□□□□□ -0.6
CCDC171-204ENST00000470191 COL6A1P12109 1028 aa11.28□□□□□ -0.6
CCDC171-204ENST00000470191 ZYXQ15942 572 aaKnown RBP11.28□□□□□ -0.6
CCDC171-204ENST00000470191 SH3D19Q5HYK7 790 aa11.28□□□□□ -0.6
CCDC171-204ENST00000470191 ZNF697Q5TEC3 545 aa11.28□□□□□ -0.6
CCDC171-204ENST00000470191 GPR142Q7Z601 462 aa11.28□□□□□ -0.6
CCDC171-204ENST00000470191 SH3RF3Q8TEJ3 882 aaPredicted RBP11.28□□□□□ -0.6
CCDC171-204ENST00000470191 SOCS4Q8WXH5 440 aa11.28□□□□□ -0.6
CCDC171-204ENST00000470191 TRIM34Q9BYJ4 488 aa11.28□□□□□ -0.6
CCDC171-204ENST00000470191 TBC1D2Q9BYX2 928 aa11.28□□□□□ -0.6
CCDC171-204ENST00000470191 RBPJLQ9UBG7 517 aa11.28□□□□□ -0.6
CCDC171-204ENST00000470191 CUL9Q8IWT3 2517 aa11.28□□□□□ -0.6
CCDC171-204ENST00000470191 MYH1P12882 1939 aa11.27□□□□□ -0.6
CCDC171-204ENST00000470191 POTEB2H3BUK9 544 aa11.27□□□□□ -0.61
CCDC171-204ENST00000470191 MAPK4P31152 587 aa11.27□□□□□ -0.61
CCDC171-204ENST00000470191 RGS2P41220 211 aa11.27□□□□□ -0.61
CCDC171-204ENST00000470191 BACE1P56817 501 aa11.27□□□□□ -0.61
CCDC171-204ENST00000470191 ERVK-9P63128 1117 aa11.27□□□□□ -0.61
CCDC171-204ENST00000470191 ERVK-24P63145 666 aa11.27□□□□□ -0.61
CCDC171-204ENST00000470191 GSTO1P78417 241 aa11.27□□□□□ -0.61
CCDC171-204ENST00000470191 PLEKHH3Q7Z736 793 aa11.27□□□□□ -0.61
CCDC171-204ENST00000470191 CRACR2BQ8N4Y2 399 aaPredicted RBP11.27□□□□□ -0.61
CCDC171-204ENST00000470191 NSUN4Q96CB9 384 aaKnown RBP11.27□□□□□ -0.61
CCDC171-204ENST00000470191 NOL10Q9BSC4 688 aaKnown RBP11.27□□□□□ -0.61
CCDC171-204ENST00000470191 SMC4Q9NTJ3 1288 aa11.27□□□□□ -0.61
CCDC171-204ENST00000470191 HMG20BQ9P0W2 317 aa11.27□□□□□ -0.61
CCDC171-204ENST00000470191 FBXO3Q9UK99 471 aa11.27□□□□□ -0.61
CCDC171-204ENST00000470191 ATP11BQ9Y2G3 1177 aa11.27□□□□□ -0.61
CCDC171-204ENST00000470191 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.27□□□□□ -0.61
CCDC171-204ENST00000470191 USP17L10C9JJH3 530 aa11.26□□□□□ -0.61
CCDC171-204ENST00000470191 ANP32CO43423 234 aa11.26□□□□□ -0.61
CCDC171-204ENST00000470191 XRCC5P13010 732 aaKnown RBP11.26□□□□□ -0.61
CCDC171-204ENST00000470191 MVPQ14764 893 aaKnown RBP11.26□□□□□ -0.61
CCDC171-204ENST00000470191 MAPKAPK5Q8IW41 473 aa11.26□□□□□ -0.61
CCDC171-204ENST00000470191 TRMT44Q8IYL2 757 aaKnown RBP11.26□□□□□ -0.61
CCDC171-204ENST00000470191 SPATA5Q8NB90 893 aa11.26□□□□□ -0.61
CCDC171-204ENST00000470191 APBA2Q99767 749 aa11.26□□□□□ -0.61
CCDC171-204ENST00000470191 PRDM5Q9NQX1 630 aaPredicted RBP11.26□□□□□ -0.61
CCDC171-204ENST00000470191 AATFQ9NY61 560 aaKnown RBP eCLIP11.26□□□□□ -0.61
CCDC171-204ENST00000470191 LRP2BPQ9P2M1 347 aa11.26□□□□□ -0.61
CCDC171-204ENST00000470191 PRKAG2Q9UGJ0 569 aa11.26□□□□□ -0.61
CCDC171-204ENST00000470191 SAP30BPQ9UHR5 308 aaKnown RBP11.26□□□□□ -0.61
CCDC171-204ENST00000470191 HERC5Q9UII4 1024 aaKnown RBP11.26□□□□□ -0.61
CCDC171-204ENST00000470191 DNAH12Q6ZR08 3092 aa11.26□□□□□ -0.61
CCDC171-204ENST00000470191 COL2A1P02458 1487 aaPredicted RBP11.25□□□□□ -0.61
CCDC171-204ENST00000470191 RLFQ13129 1914 aa11.25□□□□□ -0.61
CCDC171-204ENST00000470191 ASNSP08243 561 aa11.25□□□□□ -0.61
CCDC171-204ENST00000470191 HOXA7P31268 230 aaPredicted RBP11.25□□□□□ -0.61
CCDC171-204ENST00000470191 RTP1P59025 263 aa11.25□□□□□ -0.61
CCDC171-204ENST00000470191 MORN1Q5T089 497 aa11.25□□□□□ -0.61
CCDC171-204ENST00000470191 ANO1Q5XXA6 986 aa11.25□□□□□ -0.61
CCDC171-204ENST00000470191 FAM109BQ6ICB4 259 aaPredicted RBP11.25□□□□□ -0.61
CCDC171-204ENST00000470191 MAFAQ8NHW3 353 aaPredicted RBP11.25□□□□□ -0.61
CCDC171-204ENST00000470191 TGFBRAP1Q8WUH2 860 aa11.25□□□□□ -0.61
CCDC171-204ENST00000470191 MYLIPQ8WY64 445 aa11.25□□□□□ -0.61
CCDC171-204ENST00000470191 USP6NLQ92738 828 aa11.25□□□□□ -0.61
CCDC171-204ENST00000470191 EDC3Q96F86 508 aaKnown RBP11.25□□□□□ -0.61
CCDC171-204ENST00000470191 CDX2Q99626 313 aaPredicted RBP11.25□□□□□ -0.61
CCDC171-204ENST00000470191 MEIS3Q99687 375 aa11.25□□□□□ -0.61
CCDC171-204ENST00000470191 WDR18Q9BV38 432 aa11.25□□□□□ -0.61
CCDC171-204ENST00000470191 COPRSQ9NQ92 184 aa11.25□□□□□ -0.61
CCDC171-204ENST00000470191 SNRKQ9NRH2 765 aa11.25□□□□□ -0.61
CCDC171-204ENST00000470191 FLRT1Q9NZU1 646 aa11.25□□□□□ -0.61
CCDC171-204ENST00000470191 PI4KBQ9UBF8 816 aa11.25□□□□□ -0.61
CCDC171-204ENST00000470191 PALD1Q9ULE6 856 aa11.25□□□□□ -0.61
CCDC171-204ENST00000470191 AKAP2Q9Y2D5 859 aa11.25□□□□□ -0.61
CCDC171-204ENST00000470191 PDS5AQ29RF7 1337 aaKnown RBP11.25□□□□□ -0.61
CCDC171-204ENST00000470191 C19orf81C9J6K1 198 aa11.24□□□□□ -0.61
CCDC171-204ENST00000470191 ATP2B2Q01814 1243 aa11.24□□□□□ -0.61
CCDC171-204ENST00000470191 MAP2K5Q13163 448 aa11.24□□□□□ -0.61
CCDC171-204ENST00000470191 SHHQ15465 462 aa11.24□□□□□ -0.61
CCDC171-204ENST00000470191 C9orf50Q5SZB4 431 aa11.24□□□□□ -0.61
CCDC171-204ENST00000470191 GJC2Q5T442 439 aaPredicted RBP11.24□□□□□ -0.61
CCDC171-204ENST00000470191 MFSD14CQ5VZR4 134 aa11.24□□□□□ -0.61
CCDC171-204ENST00000470191 POTEEQ6S8J3 1075 aa11.24□□□□□ -0.61
CCDC171-204ENST00000470191 DNAJC18Q9H819 358 aa11.24□□□□□ -0.61
CCDC171-204ENST00000470191 SRGAP3O43295 1099 aa11.23□□□□□ -0.61
CCDC171-204ENST00000470191 CYP2C19P33261 490 aa11.23□□□□□ -0.61
CCDC171-204ENST00000470191 MCAMP43121 646 aa11.23□□□□□ -0.61
CCDC171-204ENST00000470191 NAA16Q6N069 864 aaPredicted RBP11.23□□□□□ -0.61
CCDC171-204ENST00000470191 FEZ1Q99689 392 aa11.23□□□□□ -0.61
CCDC171-204ENST00000470191 SEMA6BQ9H3T3 888 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms