RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 TXKP42681 527 aa16.92■□□□□ 0.3
LIMS2-213ENST00000469300 FANCBQ8NB91 859 aa16.92■□□□□ 0.3
LIMS2-213ENST00000469300 PNMA1Q8ND90 353 aa16.92■□□□□ 0.3
LIMS2-213ENST00000469300 CCDC42Q96M95 316 aa16.92■□□□□ 0.3
LIMS2-213ENST00000469300 CROCC2H7BZ55 1655 aa16.92■□□□□ 0.3
LIMS2-213ENST00000469300 FAM47AQ5JRC9 791 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 MLKLQ8NB16 471 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 MED23Q9ULK4 1368 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 EPB41P11171 864 aaKnown RBP16.91■□□□□ 0.3
LIMS2-213ENST00000469300 SP4Q02446 784 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 PRPF4BQ13523 1007 aaKnown RBP16.91■□□□□ 0.3
LIMS2-213ENST00000469300 GRAPQ13588 217 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 GRAPLQ8TC17 118 aaPredicted RBP16.91■□□□□ 0.3
LIMS2-213ENST00000469300 DNM3Q9UQ16 869 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 MRPL11Q9Y3B7 192 aaKnown RBP16.91■□□□□ 0.3
LIMS2-213ENST00000469300 TNKSO95271 1327 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 GTF2F1P35269 517 aaKnown RBP eCLIP16.91■□□□□ 0.3
LIMS2-213ENST00000469300 DNA2P51530 1060 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 RBM6P78332 1123 aaKnown RBP16.91■□□□□ 0.3
LIMS2-213ENST00000469300 NLRX1Q86UT6 975 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 DCPSQ96C86 337 aaKnown RBP16.91■□□□□ 0.3
LIMS2-213ENST00000469300 MYL10Q9BUA6 226 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 SELENOOQ9BVL4 669 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 NT5C3AQ9H0P0 336 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 JADE2Q9NQC1 790 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 NARFQ9UHQ1 456 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 DIP2CQ9Y2E4 1556 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 KRT86O43790 486 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 PFKFB2O60825 505 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 FAM193AP78312 1265 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 PDE4DQ08499 809 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 PHKBQ93100 1093 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 AZI2Q9H6S1 392 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 LUC7L2Q9Y383 392 aaKnown RBP16.91■□□□□ 0.3
LIMS2-213ENST00000469300 MRVI1Q9Y6F6 885 aa16.91■□□□□ 0.3
LIMS2-213ENST00000469300 TRAF5O00463 557 aa16.9■□□□□ 0.3
LIMS2-213ENST00000469300 CFBP00751 764 aa16.9■□□□□ 0.3
LIMS2-213ENST00000469300 KIF5AQ12840 1032 aa16.9■□□□□ 0.3
LIMS2-213ENST00000469300 SNX29Q8TEQ0 813 aa16.9■□□□□ 0.3
LIMS2-213ENST00000469300 MAP4K1Q92918 833 aa16.9■□□□□ 0.3
LIMS2-213ENST00000469300 CCDC175P0C221 793 aa16.9■□□□□ 0.3
LIMS2-213ENST00000469300 CALCRLQ16602 461 aa16.9■□□□□ 0.3
LIMS2-213ENST00000469300 GRIPAP1Q4V328 841 aa16.9■□□□□ 0.3
LIMS2-213ENST00000469300 CCDC186Q7Z3E2 898 aa16.9■□□□□ 0.3
LIMS2-213ENST00000469300 CNGA4Q8IV77 575 aa16.9■□□□□ 0.3
LIMS2-213ENST00000469300 IPO4Q8TEX9 1081 aaKnown RBP16.9■□□□□ 0.3
LIMS2-213ENST00000469300 LRRC45Q96CN5 670 aa16.9■□□□□ 0.3
LIMS2-213ENST00000469300 BSDC1Q9NW68 430 aaPredicted RBP16.9■□□□□ 0.3
LIMS2-213ENST00000469300 BIN2Q9UBW5 565 aaPredicted RBP16.9■□□□□ 0.3
LIMS2-213ENST00000469300 GCOM1H8Y6P7 765 aaPredicted RBP16.9■□□□□ 0.3
LIMS2-213ENST00000469300 MYZAPP0CAP1 466 aa16.9■□□□□ 0.3
LIMS2-213ENST00000469300 UBXN1Q04323 297 aa16.9■□□□□ 0.3
LIMS2-213ENST00000469300 ICA1Q05084 483 aa16.9■□□□□ 0.3
LIMS2-213ENST00000469300 IFFO1Q0D2I5 559 aa16.9■□□□□ 0.3
LIMS2-213ENST00000469300 GNPTABQ3T906 1256 aa16.9■□□□□ 0.3
LIMS2-213ENST00000469300 CETN3O15182 167 aa16.9■□□□□ 0.3
LIMS2-213ENST00000469300 MYCLP12524 364 aaPredicted RBP16.9■□□□□ 0.3
LIMS2-213ENST00000469300 GTF2A1P52655 376 aaPredicted RBP16.9■□□□□ 0.3
LIMS2-213ENST00000469300 SLC27A3Q5K4L6 730 aa16.9■□□□□ 0.3
LIMS2-213ENST00000469300 SMCR8Q8TEV9 937 aaPredicted RBP16.9■□□□□ 0.3
LIMS2-213ENST00000469300 C1orf167Q5SNV9 1468 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 PRAMEF22A3QJZ6 481 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 CDAN1Q8IWY9 1227 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 RTKN2Q8IZC4 609 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 SDR42E1Q8WUS8 393 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 LEO1Q8WVC0 666 aaPredicted RBP16.89■□□□□ 0.29
LIMS2-213ENST00000469300 ZMYM6O95789 1325 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 SMCO2A6NFE2 343 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 STX17P56962 302 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 PTPN12Q05209 780 aaKnown RBP16.89■□□□□ 0.29
LIMS2-213ENST00000469300 KIAA0753Q2KHM9 967 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 VWA3BQ502W6 1294 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 GPATCH4Q5T3I0 446 aaKnown RBP16.89■□□□□ 0.29
LIMS2-213ENST00000469300 MCF2L2Q86YR7 1114 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.89■□□□□ 0.29
LIMS2-213ENST00000469300 FNBP1Q96RU3 617 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 BEGAINQ9BUH8 593 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 DLC1Q96QB1 1528 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 CRB1P82279 1406 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 AXIN2Q9Y2T1 843 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 SHTN1A0MZ66 631 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 ADORA1P30542 326 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 SCNN1DP51172 638 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 TUBB4BP68371 445 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 TRIM14Q14142 442 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 CCDC91Q7Z6B0 441 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 PLIN2Q99541 437 aa16.89■□□□□ 0.29
LIMS2-213ENST00000469300 DHX36Q9H2U1 1008 aaKnown RBP16.89■□□□□ 0.29
LIMS2-213ENST00000469300 PTH1RQ03431 593 aa16.88■□□□□ 0.29
LIMS2-213ENST00000469300 HLTFQ14527 1009 aaKnown RBP eCLIP16.88■□□□□ 0.29
LIMS2-213ENST00000469300 TTLL11Q8NHH1 800 aa16.88■□□□□ 0.29
LIMS2-213ENST00000469300 SEC31BQ9NQW1 1179 aa16.88■□□□□ 0.29
LIMS2-213ENST00000469300 NOD1Q9Y239 953 aa16.88■□□□□ 0.29
LIMS2-213ENST00000469300 CLSTN2Q9H4D0 955 aa16.88■□□□□ 0.29
LIMS2-213ENST00000469300 RPAP1Q9BWH6 1393 aaPredicted RBP16.88■□□□□ 0.29
LIMS2-213ENST00000469300 CALUO43852 315 aaPredicted RBP16.88■□□□□ 0.29
LIMS2-213ENST00000469300 FOSP01100 380 aaPredicted RBP16.88■□□□□ 0.29
LIMS2-213ENST00000469300 STRN3Q13033 797 aa16.88■□□□□ 0.29
LIMS2-213ENST00000469300 POLA2Q14181 598 aa16.88■□□□□ 0.29
LIMS2-213ENST00000469300 SMAP1Q8IYB5 467 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms