RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 NECAB2Q7Z6G3 386 aa15.01□□□□□ -0.01
COL5A1-207ENST00000469093 DIS3LQ8TF46 1054 aaKnown RBP15.01□□□□□ -0.01
COL5A1-207ENST00000469093 TXNRD2Q9NNW7 524 aa15.01□□□□□ -0.01
COL5A1-207ENST00000469093 HMX1Q9NP08 348 aaPredicted RBP15.01□□□□□ -0.01
COL5A1-207ENST00000469093 PIH1D3Q9NQM4 214 aaKnown RBP15.01□□□□□ -0.01
COL5A1-207ENST00000469093 TMOD4Q9NZQ9 345 aa15.01□□□□□ -0.01
COL5A1-207ENST00000469093 NOP58Q9Y2X3 529 aaKnown RBP15.01□□□□□ -0.01
COL5A1-207ENST00000469093 IGSF3O75054 1194 aa15□□□□□ -0.01
COL5A1-207ENST00000469093 GDF11O95390 407 aa15□□□□□ -0.01
COL5A1-207ENST00000469093 CYP2B6P20813 491 aa15□□□□□ -0.01
COL5A1-207ENST00000469093 Q3C1V9 767 aa15□□□□□ -0.01
COL5A1-207ENST00000469093 CRACR2BQ8N4Y2 399 aaPredicted RBP15□□□□□ -0.01
COL5A1-207ENST00000469093 ANKLE1Q8NAG6 615 aa15□□□□□ -0.01
COL5A1-207ENST00000469093 GPRC5AQ8NFJ5 357 aa15□□□□□ -0.01
COL5A1-207ENST00000469093 C1orf115Q9H7X2 142 aa15□□□□□ -0.01
COL5A1-207ENST00000469093 GINM1Q9NU53 330 aa15□□□□□ -0.01
COL5A1-207ENST00000469093 RBPJLQ9UBG7 517 aa15□□□□□ -0.01
COL5A1-207ENST00000469093 STAP2Q9UGK3 403 aa15□□□□□ -0.01
COL5A1-207ENST00000469093 SAP30BPQ9UHR5 308 aaKnown RBP15□□□□□ -0.01
COL5A1-207ENST00000469093 DBNLQ9UJU6 430 aaKnown RBP15□□□□□ -0.01
COL5A1-207ENST00000469093 MNX1P50219 401 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-207ENST00000469093 HERVK_113P62684 666 aa14.99□□□□□ -0.01
COL5A1-207ENST00000469093 DYNLL1P63167 89 aaKnown RBP14.99□□□□□ -0.01
COL5A1-207ENST00000469093 POTEEQ6S8J3 1075 aa14.99□□□□□ -0.01
COL5A1-207ENST00000469093 TRIB2Q92519 343 aa14.99□□□□□ -0.01
COL5A1-207ENST00000469093 EAF2Q96CJ1 260 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-207ENST00000469093 TRIM34Q9BYJ4 488 aa14.99□□□□□ -0.01
COL5A1-207ENST00000469093 EMILIN3Q9NT22 766 aa14.99□□□□□ -0.01
COL5A1-207ENST00000469093 ZBTB21Q9ULJ3 1066 aa14.99□□□□□ -0.01
COL5A1-207ENST00000469093 SZT2Q5T011 3432 aa14.99□□□□□ -0.01
COL5A1-207ENST00000469093 A0A1W2PPC1 479 aa14.98□□□□□ -0.01
COL5A1-207ENST00000469093 XRCC5P13010 732 aaKnown RBP14.98□□□□□ -0.01
COL5A1-207ENST00000469093 CYP7A1P22680 504 aa14.98□□□□□ -0.01
COL5A1-207ENST00000469093 MAP3K21Q5TCX8 1036 aa14.98□□□□□ -0.01
COL5A1-207ENST00000469093 NUDT12Q9BQG2 462 aa14.98□□□□□ -0.01
COL5A1-207ENST00000469093 NBPF3Q9H094 633 aa14.98□□□□□ -0.01
COL5A1-207ENST00000469093 CCDC8Q9H0W5 538 aaPredicted RBP14.98□□□□□ -0.01
COL5A1-207ENST00000469093 TLR7Q9NYK1 1049 aaKnown RBP14.98□□□□□ -0.01
COL5A1-207ENST00000469093 LOC285556D6RIA3 1793 aa14.98□□□□□ -0.01
COL5A1-207ENST00000469093 HLA-DOAP06340 250 aa14.97□□□□□ -0.01
COL5A1-207ENST00000469093 USP6NLQ92738 828 aa14.97□□□□□ -0.01
COL5A1-207ENST00000469093 OGDHLQ9ULD0 1010 aa14.97□□□□□ -0.01
COL5A1-207ENST00000469093 SOX1O00570 391 aaPredicted RBP14.96□□□□□ -0.01
COL5A1-207ENST00000469093 IDH1O75874 414 aaKnown RBP14.96□□□□□ -0.01
COL5A1-207ENST00000469093 GH2P01242 217 aa14.96□□□□□ -0.01
COL5A1-207ENST00000469093 RLBP1P12271 317 aa14.96□□□□□ -0.01
COL5A1-207ENST00000469093 MAPK4P31152 587 aa14.96□□□□□ -0.01
COL5A1-207ENST00000469093 TATDN1Q6P1N9 297 aa14.96□□□□□ -0.01
COL5A1-207ENST00000469093 USP17L2Q6R6M4 530 aa14.96□□□□□ -0.01
COL5A1-207ENST00000469093 MIGA1Q8NAN2 632 aa14.96□□□□□ -0.01
COL5A1-207ENST00000469093 SOCS4Q8WXH5 440 aa14.96□□□□□ -0.01
COL5A1-207ENST00000469093 GDF15Q99988 308 aa14.96□□□□□ -0.01
COL5A1-207ENST00000469093 PORCNQ9H237 461 aa14.96□□□□□ -0.01
COL5A1-207ENST00000469093 SIPA1L1O43166 1804 aa14.96□□□□□ -0.01
COL5A1-207ENST00000469093 ATAD5Q96QE3 1844 aa14.96□□□□□ -0.01
COL5A1-207ENST00000469093 PRKAR2AP13861 404 aaKnown RBP14.95□□□□□ -0.02
COL5A1-207ENST00000469093 BMP8BP34820 402 aa14.95□□□□□ -0.02
COL5A1-207ENST00000469093 ERVK-9P63128 1117 aa14.95□□□□□ -0.02
COL5A1-207ENST00000469093 ERVK-24P63145 666 aa14.95□□□□□ -0.02
COL5A1-207ENST00000469093 MORN1Q5T089 497 aa14.95□□□□□ -0.02
COL5A1-207ENST00000469093 C7orf61Q8IZ16 206 aa14.95□□□□□ -0.02
COL5A1-207ENST00000469093 MAGEB6Q8N7X4 407 aa14.95□□□□□ -0.02
COL5A1-207ENST00000469093 C11orf49Q9H6J7 331 aa14.95□□□□□ -0.02
COL5A1-207ENST00000469093 ANTXR1Q9H6X2 564 aa14.95□□□□□ -0.02
COL5A1-207ENST00000469093 NDUFB9Q9Y6M9 179 aa14.95□□□□□ -0.02
COL5A1-207ENST00000469093 USP5P45974 858 aa14.94□□□□□ -0.02
COL5A1-207ENST00000469093 CACNB2Q08289 660 aaPredicted RBP14.94□□□□□ -0.02
COL5A1-207ENST00000469093 PDE3AQ14432 1141 aa14.94□□□□□ -0.02
COL5A1-207ENST00000469093 GPR142Q7Z601 462 aa14.94□□□□□ -0.02
COL5A1-207ENST00000469093 ITPRIPQ8IWB1 547 aa14.94□□□□□ -0.02
COL5A1-207ENST00000469093 CCAR1Q8IX12 1150 aaKnown RBP14.94□□□□□ -0.02
COL5A1-207ENST00000469093 FTSJ3Q8IY81 847 aaKnown RBP14.94□□□□□ -0.02
COL5A1-207ENST00000469093 TRMT44Q8IYL2 757 aaKnown RBP14.94□□□□□ -0.02
COL5A1-207ENST00000469093 GTF3C2Q8WUA4 911 aaPredicted RBP14.94□□□□□ -0.02
COL5A1-207ENST00000469093 LRCH3Q96II8 777 aa14.94□□□□□ -0.02
COL5A1-207ENST00000469093 C12orf42Q96LP6 360 aa14.94□□□□□ -0.02
COL5A1-207ENST00000469093 PAGR1Q9BTK6 254 aa14.94□□□□□ -0.02
COL5A1-207ENST00000469093 SERPINB13Q9UIV8 391 aa14.94□□□□□ -0.02
COL5A1-207ENST00000469093 ZMYND8Q9ULU4 1186 aaPredicted RBP14.94□□□□□ -0.02
COL5A1-207ENST00000469093 USP17L15C9J2P7 530 aa14.93□□□□□ -0.02
COL5A1-207ENST00000469093 USP17L13C9JLJ4 530 aa14.93□□□□□ -0.02
COL5A1-207ENST00000469093 USP17L11C9JVI0 530 aa14.93□□□□□ -0.02
COL5A1-207ENST00000469093 USP17L18D6R9N7 530 aa14.93□□□□□ -0.02
COL5A1-207ENST00000469093 USP17L22D6RA61 530 aa14.93□□□□□ -0.02
COL5A1-207ENST00000469093 USP17L17D6RBQ6 530 aa14.93□□□□□ -0.02
COL5A1-207ENST00000469093 USP17L19D6RCP7 530 aa14.93□□□□□ -0.02
COL5A1-207ENST00000469093 USP17L20D6RJB6 530 aa14.93□□□□□ -0.02
COL5A1-207ENST00000469093 USP17L24Q0WX57 530 aa14.93□□□□□ -0.02
COL5A1-207ENST00000469093 CCL14Q16627 93 aa14.93□□□□□ -0.02
COL5A1-207ENST00000469093 LHX8Q68G74 356 aa14.93□□□□□ -0.02
COL5A1-207ENST00000469093 PLEKHH3Q7Z736 793 aa14.93□□□□□ -0.02
COL5A1-207ENST00000469093 TTC6Q86TZ1 520 aa14.93□□□□□ -0.02
COL5A1-207ENST00000469093 CERS3Q8IU89 383 aa14.93□□□□□ -0.02
COL5A1-207ENST00000469093 EHD4Q9H223 541 aa14.93□□□□□ -0.02
COL5A1-207ENST00000469093 RABGAP1Q9Y3P9 1069 aa14.93□□□□□ -0.02
COL5A1-207ENST00000469093 PLXNB2O15031 1838 aa14.93□□□□□ -0.02
COL5A1-207ENST00000469093 MYO5AQ9Y4I1 1855 aaKnown RBP14.93□□□□□ -0.02
COL5A1-207ENST00000469093 CNMDO75829 334 aa14.92□□□□□ -0.02
COL5A1-207ENST00000469093 ZKSCAN1P17029 563 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-207ENST00000469093 CCND3P30281 292 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms