RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 WTAPQ15007 396 aa18.09■□□□□ 0.49
TSPAN4-211ENST00000468468 HSP90AA4PQ58FG1 418 aa18.09■□□□□ 0.49
TSPAN4-211ENST00000468468 ZNF771Q7L3S4 317 aaPredicted RBP18.09■□□□□ 0.49
TSPAN4-211ENST00000468468 CCDC152Q4G0S7 254 aa18.09■□□□□ 0.49
TSPAN4-211ENST00000468468 ELOA2Q8IYF1 753 aaPredicted RBP18.09■□□□□ 0.49
TSPAN4-211ENST00000468468 KRT222Q8N1A0 295 aa18.09■□□□□ 0.49
TSPAN4-211ENST00000468468 MAN1B1Q9UKM7 699 aa18.09■□□□□ 0.49
TSPAN4-211ENST00000468468 SLC4A4Q9Y6R1 1079 aa18.09■□□□□ 0.49
TSPAN4-211ENST00000468468 PTPREP23469 700 aa18.08■□□□□ 0.49
TSPAN4-211ENST00000468468 SART3Q15020 963 aaKnown RBP18.08■□□□□ 0.49
TSPAN4-211ENST00000468468 POSTNQ15063 836 aa18.08■□□□□ 0.49
TSPAN4-211ENST00000468468 BICDL1Q6ZP65 573 aa18.08■□□□□ 0.49
TSPAN4-211ENST00000468468 PAXIP1Q6ZW49 1069 aaPredicted RBP18.08■□□□□ 0.49
TSPAN4-211ENST00000468468 CMTR1Q8N1G2 835 aaKnown RBP18.08■□□□□ 0.49
TSPAN4-211ENST00000468468 LCORLQ8N3X6 602 aa18.08■□□□□ 0.49
TSPAN4-211ENST00000468468 FBXO2Q9UK22 296 aaPredicted RBP18.08■□□□□ 0.49
TSPAN4-211ENST00000468468 PHLPP2Q6ZVD8 1323 aa18.08■□□□□ 0.49
TSPAN4-211ENST00000468468 POLR2DO15514 142 aaKnown RBP18.08■□□□□ 0.48
TSPAN4-211ENST00000468468 RILPL1Q5EBL4 403 aa18.08■□□□□ 0.48
TSPAN4-211ENST00000468468 NACAP1Q9BZK3 213 aa18.08■□□□□ 0.48
TSPAN4-211ENST00000468468 INTS13Q9NVM9 706 aa18.08■□□□□ 0.48
TSPAN4-211ENST00000468468 SERTAD1Q9UHV2 236 aa18.08■□□□□ 0.48
TSPAN4-211ENST00000468468 ERICH2A1L162 156 aa18.08■□□□□ 0.48
TSPAN4-211ENST00000468468 GABPB1Q06547 395 aaPredicted RBP18.08■□□□□ 0.48
TSPAN4-211ENST00000468468 TRIM65Q6PJ69 517 aa18.08■□□□□ 0.48
TSPAN4-211ENST00000468468 REXO1L1PQ8IX06 675 aa18.08■□□□□ 0.48
TSPAN4-211ENST00000468468 STAG1Q8WVM7 1258 aa18.08■□□□□ 0.48
TSPAN4-211ENST00000468468 FOXP1Q9H334 677 aaPredicted RBP18.08■□□□□ 0.48
TSPAN4-211ENST00000468468 ZNF652Q9Y2D9 606 aa18.08■□□□□ 0.48
TSPAN4-211ENST00000468468 PRR29P0C7W0 189 aa18.07■□□□□ 0.48
TSPAN4-211ENST00000468468 NR5A1Q13285 461 aa18.07■□□□□ 0.48
TSPAN4-211ENST00000468468 C3orf67Q6ZVT6 689 aa18.07■□□□□ 0.48
TSPAN4-211ENST00000468468 PCDHB6Q9Y5E3 794 aa18.07■□□□□ 0.48
TSPAN4-211ENST00000468468 NID2Q14112 1375 aa18.07■□□□□ 0.48
TSPAN4-211ENST00000468468 CICQ96RK0 1608 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-211ENST00000468468 COL5A3P25940 1745 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-211ENST00000468468 DEXIO95424 95 aa18.07■□□□□ 0.48
TSPAN4-211ENST00000468468 ATP2B1P20020 1258 aa18.07■□□□□ 0.48
TSPAN4-211ENST00000468468 CDK11BP21127 795 aaKnown RBP18.07■□□□□ 0.48
TSPAN4-211ENST00000468468 IGHMBP2P38935 993 aaKnown RBP18.07■□□□□ 0.48
TSPAN4-211ENST00000468468 ERFEQ4G0M1 354 aa18.07■□□□□ 0.48
TSPAN4-211ENST00000468468 CRACR2BQ8N4Y2 399 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-211ENST00000468468 NUP133Q8WUM0 1156 aa18.07■□□□□ 0.48
TSPAN4-211ENST00000468468 USP21Q9UK80 565 aa18.07■□□□□ 0.48
TSPAN4-211ENST00000468468 COL4A1P02462 1669 aa18.06■□□□□ 0.48
TSPAN4-211ENST00000468468 GNAT2P19087 354 aa18.06■□□□□ 0.48
TSPAN4-211ENST00000468468 FNBP4Q8N3X1 1017 aaPredicted RBP18.06■□□□□ 0.48
TSPAN4-211ENST00000468468 PDILTQ8N807 584 aa18.06■□□□□ 0.48
TSPAN4-211ENST00000468468 SMARCE1Q969G3 411 aa18.06■□□□□ 0.48
TSPAN4-211ENST00000468468 NFE2L3Q9Y4A8 694 aa18.06■□□□□ 0.48
TSPAN4-211ENST00000468468 ZSCAN12O43309 604 aa18.06■□□□□ 0.48
TSPAN4-211ENST00000468468 FMR1Q06787 632 aaKnown RBP eCLIP18.06■□□□□ 0.48
TSPAN4-211ENST00000468468 FCHSD1Q86WN1 690 aa18.06■□□□□ 0.48
TSPAN4-211ENST00000468468 MIGA1Q8NAN2 632 aa18.06■□□□□ 0.48
TSPAN4-211ENST00000468468 ZNF446Q9NWS9 450 aa18.06■□□□□ 0.48
TSPAN4-211ENST00000468468 FAM53CQ9NYF3 392 aa18.06■□□□□ 0.48
TSPAN4-211ENST00000468468 CCDC196A0A1B0GTZ2 297 aa18.05■□□□□ 0.48
TSPAN4-211ENST00000468468 H2AFXP16104 143 aaPredicted RBP18.05■□□□□ 0.48
TSPAN4-211ENST00000468468 BCAMP50895 628 aa18.05■□□□□ 0.48
TSPAN4-211ENST00000468468 ZNF827Q17R98 1081 aa18.05■□□□□ 0.48
TSPAN4-211ENST00000468468 TMEM139Q8IV31 216 aa18.05■□□□□ 0.48
TSPAN4-211ENST00000468468 GRAMD1CQ8IYS0 662 aa18.05■□□□□ 0.48
TSPAN4-211ENST00000468468 TMTC2Q8N394 836 aa18.05■□□□□ 0.48
TSPAN4-211ENST00000468468 MLKLQ8NB16 471 aa18.05■□□□□ 0.48
TSPAN4-211ENST00000468468 CHD4Q14839 1912 aa18.05■□□□□ 0.48
TSPAN4-211ENST00000468468 ARHGAP6O43182 974 aa18.05■□□□□ 0.48
TSPAN4-211ENST00000468468 URI1O94763 535 aaPredicted RBP18.05■□□□□ 0.48
TSPAN4-211ENST00000468468 SARSP49591 514 aaKnown RBP18.05■□□□□ 0.48
TSPAN4-211ENST00000468468 NT5DC1Q5TFE4 455 aa18.05■□□□□ 0.48
TSPAN4-211ENST00000468468 TRMT44Q8IYL2 757 aaKnown RBP18.05■□□□□ 0.48
TSPAN4-211ENST00000468468 FANCBQ8NB91 859 aa18.05■□□□□ 0.48
TSPAN4-211ENST00000468468 OXER1Q8TDS5 423 aa18.05■□□□□ 0.48
TSPAN4-211ENST00000468468 DACH1Q9UI36 760 aa18.05■□□□□ 0.48
TSPAN4-211ENST00000468468 CHRNDQ07001 517 aa18.04■□□□□ 0.48
TSPAN4-211ENST00000468468 TBX2Q13207 712 aaPredicted RBP18.04■□□□□ 0.48
TSPAN4-211ENST00000468468 ARHGAP29Q52LW3 1261 aa18.04■□□□□ 0.48
TSPAN4-211ENST00000468468 CLEC4GQ6UXB4 293 aa18.04■□□□□ 0.48
TSPAN4-211ENST00000468468 PNPLA7Q6ZV29 1317 aa18.04■□□□□ 0.48
TSPAN4-211ENST00000468468 ZNF654Q8IZM8 581 aa18.04■□□□□ 0.48
TSPAN4-211ENST00000468468 PPP2R2CQ9Y2T4 447 aa18.04■□□□□ 0.48
TSPAN4-211ENST00000468468 SRPRBQ9Y5M8 271 aaKnown RBP18.04■□□□□ 0.48
TSPAN4-211ENST00000468468 TIAM2Q8IVF5 1701 aa18.04■□□□□ 0.48
TSPAN4-211ENST00000468468 MORC3Q14149 939 aa18.04■□□□□ 0.48
TSPAN4-211ENST00000468468 FAM177A1Q8N128 213 aaPredicted RBP18.04■□□□□ 0.48
TSPAN4-211ENST00000468468 ZNF579Q8NAF0 562 aaKnown RBP18.04■□□□□ 0.48
TSPAN4-211ENST00000468468 ENOX1Q8TC92 643 aaKnown RBP18.04■□□□□ 0.48
TSPAN4-211ENST00000468468 BAG1Q99933 345 aaPredicted RBP18.04■□□□□ 0.48
TSPAN4-211ENST00000468468 CABP5Q9NP86 173 aa18.04■□□□□ 0.48
TSPAN4-211ENST00000468468 LRP2BPQ9P2M1 347 aa18.04■□□□□ 0.48
TSPAN4-211ENST00000468468 ARAP2Q8WZ64 1704 aa18.04■□□□□ 0.48
TSPAN4-211ENST00000468468 WTIPA6NIX2 430 aaPredicted RBP18.03■□□□□ 0.48
TSPAN4-211ENST00000468468 TBC1D9BQ66K14 1250 aa18.03■□□□□ 0.48
TSPAN4-211ENST00000468468 MNS1Q8NEH6 495 aa18.03■□□□□ 0.48
TSPAN4-211ENST00000468468 RNF41Q9H4P4 317 aaPredicted RBP18.03■□□□□ 0.48
TSPAN4-211ENST00000468468 SRP68Q9UHB9 627 aaKnown RBP18.03■□□□□ 0.48
TSPAN4-211ENST00000468468 CEP131Q9UPN4 1083 aa18.03■□□□□ 0.48
TSPAN4-211ENST00000468468 VWA3AA6NCI4 1184 aa18.03■□□□□ 0.48
TSPAN4-211ENST00000468468 FANCGO15287 622 aa18.03■□□□□ 0.48
TSPAN4-211ENST00000468468 ZNF18P17022 549 aa18.03■□□□□ 0.48
TSPAN4-211ENST00000468468 IRX5P78411 483 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 422.4 ms