RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 TXNRD2Q9NNW7 524 aa16.08■□□□□ 0.16
PTPN7-207ENST00000468385 SNRKQ9NRH2 765 aa16.08■□□□□ 0.16
PTPN7-207ENST00000468385 OGDHLQ9ULD0 1010 aa16.08■□□□□ 0.16
PTPN7-207ENST00000468385 FLT1P17948 1338 aa16.08■□□□□ 0.16
PTPN7-207ENST00000468385 MAST2Q6P0Q8 1798 aa16.08■□□□□ 0.16
PTPN7-207ENST00000468385 HERVK_113P62684 666 aa16.07■□□□□ 0.16
PTPN7-207ENST00000468385 FOXP4Q8IVH2 680 aaPredicted RBP16.07■□□□□ 0.16
PTPN7-207ENST00000468385 C11orf49Q9H6J7 331 aa16.07■□□□□ 0.16
PTPN7-207ENST00000468385 TMOD4Q9NZQ9 345 aa16.07■□□□□ 0.16
PTPN7-207ENST00000468385 ZMYND8Q9ULU4 1186 aaPredicted RBP16.07■□□□□ 0.16
PTPN7-207ENST00000468385 DDX60LQ5H9U9 1706 aaKnown RBP16.07■□□□□ 0.16
PTPN7-207ENST00000468385 COL6A3P12111 3177 aa16.07■□□□□ 0.16
PTPN7-207ENST00000468385 C19orf81C9J6K1 198 aa16.06■□□□□ 0.16
PTPN7-207ENST00000468385 GDF11O95390 407 aa16.06■□□□□ 0.16
PTPN7-207ENST00000468385 CYP2E1P05181 493 aaPredicted RBP16.06■□□□□ 0.16
PTPN7-207ENST00000468385 PLCG2P16885 1265 aa16.06■□□□□ 0.16
PTPN7-207ENST00000468385 TNNI3KQ59H18 835 aa16.06■□□□□ 0.16
PTPN7-207ENST00000468385 TTC39AQ5SRH9 613 aa16.06■□□□□ 0.16
PTPN7-207ENST00000468385 ATF7IPQ6VMQ6 1270 aa16.06■□□□□ 0.16
PTPN7-207ENST00000468385 GPRC5AQ8NFJ5 357 aa16.06■□□□□ 0.16
PTPN7-207ENST00000468385 NUDT12Q9BQG2 462 aa16.06■□□□□ 0.16
PTPN7-207ENST00000468385 DBNDD2Q9BQY9 259 aa16.06■□□□□ 0.16
PTPN7-207ENST00000468385 GPR108Q9NPR9 543 aa16.06■□□□□ 0.16
PTPN7-207ENST00000468385 GINM1Q9NU53 330 aa16.06■□□□□ 0.16
PTPN7-207ENST00000468385 RBPJLQ9UBG7 517 aa16.06■□□□□ 0.16
PTPN7-207ENST00000468385 PALD1Q9ULE6 856 aa16.06■□□□□ 0.16
PTPN7-207ENST00000468385 FPGT-TNNI3KV9GXZ4 949 aa16.06■□□□□ 0.16
PTPN7-207ENST00000468385 USP17L10C9JJH3 530 aa16.05■□□□□ 0.16
PTPN7-207ENST00000468385 IPO8O15397 1037 aaKnown RBP16.05■□□□□ 0.16
PTPN7-207ENST00000468385 XRCC5P13010 732 aaKnown RBP16.05■□□□□ 0.16
PTPN7-207ENST00000468385 PRKAR2AP13861 404 aaKnown RBP16.05■□□□□ 0.16
PTPN7-207ENST00000468385 POLA2Q14181 598 aa16.05■□□□□ 0.16
PTPN7-207ENST00000468385 Q3C1V9 767 aa16.05■□□□□ 0.16
PTPN7-207ENST00000468385 POTEEQ6S8J3 1075 aa16.05■□□□□ 0.16
PTPN7-207ENST00000468385 SLC17A8Q8NDX2 589 aa16.05■□□□□ 0.16
PTPN7-207ENST00000468385 SOCS4Q8WXH5 440 aa16.05■□□□□ 0.16
PTPN7-207ENST00000468385 USP6NLQ92738 828 aa16.05■□□□□ 0.16
PTPN7-207ENST00000468385 ZBTB21Q9ULJ3 1066 aa16.05■□□□□ 0.16
PTPN7-207ENST00000468385 CDK5RAP2Q96SN8 1893 aa16.05■□□□□ 0.16
PTPN7-207ENST00000468385 FOCADQ5VW36 1801 aa16.05■□□□□ 0.16
PTPN7-207ENST00000468385 PFASO15067 1338 aa16.04■□□□□ 0.16
PTPN7-207ENST00000468385 BCAR3O75815 825 aa16.04■□□□□ 0.16
PTPN7-207ENST00000468385 SYN1P17600 705 aa16.04■□□□□ 0.16
PTPN7-207ENST00000468385 ERVK-9P63128 1117 aa16.04■□□□□ 0.16
PTPN7-207ENST00000468385 ERVK-24P63145 666 aa16.04■□□□□ 0.16
PTPN7-207ENST00000468385 CCDC158Q5M9N0 1113 aa16.04■□□□□ 0.16
PTPN7-207ENST00000468385 CRACR2BQ8N4Y2 399 aaPredicted RBP16.04■□□□□ 0.16
PTPN7-207ENST00000468385 FRAT1Q92837 279 aaPredicted RBP16.04■□□□□ 0.16
PTPN7-207ENST00000468385 CLUAP1Q96AJ1 413 aa16.04■□□□□ 0.16
PTPN7-207ENST00000468385 TRIM34Q9BYJ4 488 aa16.04■□□□□ 0.16
PTPN7-207ENST00000468385 PORCNQ9H237 461 aa16.04■□□□□ 0.16
PTPN7-207ENST00000468385 EMILIN3Q9NT22 766 aa16.04■□□□□ 0.16
PTPN7-207ENST00000468385 MAPK4P31152 587 aa16.03■□□□□ 0.16
PTPN7-207ENST00000468385 MAGEA10P43363 369 aaPredicted RBP16.03■□□□□ 0.16
PTPN7-207ENST00000468385 ZAP70P43403 619 aa16.03■□□□□ 0.16
PTPN7-207ENST00000468385 DYNLL1P63167 89 aaKnown RBP16.03■□□□□ 0.16
PTPN7-207ENST00000468385 CACNB2Q08289 660 aaPredicted RBP16.03■□□□□ 0.16
PTPN7-207ENST00000468385 MORN1Q5T089 497 aa16.03■□□□□ 0.16
PTPN7-207ENST00000468385 GPR153Q6NV75 609 aa16.03■□□□□ 0.16
PTPN7-207ENST00000468385 GPR142Q7Z601 462 aa16.03■□□□□ 0.16
PTPN7-207ENST00000468385 TMEM57Q8N5G2 664 aa16.03■□□□□ 0.16
PTPN7-207ENST00000468385 ZNF512BQ96KM6 892 aaPredicted RBP16.03■□□□□ 0.16
PTPN7-207ENST00000468385 PIH1D3Q9NQM4 214 aaKnown RBP16.03■□□□□ 0.16
PTPN7-207ENST00000468385 SAP30BPQ9UHR5 308 aaKnown RBP16.03■□□□□ 0.16
PTPN7-207ENST00000468385 MYO5AQ9Y4I1 1855 aaKnown RBP16.02■□□□□ 0.16
PTPN7-207ENST00000468385 IGSF3O75054 1194 aa16.02■□□□□ 0.16
PTPN7-207ENST00000468385 COL6A1P12109 1028 aa16.02■□□□□ 0.16
PTPN7-207ENST00000468385 ZKSCAN1P17029 563 aaPredicted RBP16.02■□□□□ 0.16
PTPN7-207ENST00000468385 PDE3AQ14432 1141 aa16.02■□□□□ 0.16
PTPN7-207ENST00000468385 CCL14Q16627 93 aa16.02■□□□□ 0.16
PTPN7-207ENST00000468385 LRIT3Q3SXY7 679 aa16.02■□□□□ 0.16
PTPN7-207ENST00000468385 LHX8Q68G74 356 aa16.02■□□□□ 0.16
PTPN7-207ENST00000468385 TRMT44Q8IYL2 757 aaKnown RBP16.02■□□□□ 0.16
PTPN7-207ENST00000468385 SSH3Q8TE77 659 aa16.02■□□□□ 0.16
PTPN7-207ENST00000468385 GTF3C2Q8WUA4 911 aaPredicted RBP16.02■□□□□ 0.16
PTPN7-207ENST00000468385 PAGR1Q9BTK6 254 aa16.02■□□□□ 0.16
PTPN7-207ENST00000468385 DLL1O00548 723 aa16.01■□□□□ 0.15
PTPN7-207ENST00000468385 HLA-DOAP06340 250 aa16.01■□□□□ 0.15
PTPN7-207ENST00000468385 CCND3P30281 292 aaPredicted RBP16.01■□□□□ 0.15
PTPN7-207ENST00000468385 RGS2P41220 211 aa16.01■□□□□ 0.15
PTPN7-207ENST00000468385 ATP8B2P98198 1209 aa16.01■□□□□ 0.15
PTPN7-207ENST00000468385 USP17L2Q6R6M4 530 aa16.01■□□□□ 0.15
PTPN7-207ENST00000468385 PLEKHH3Q7Z736 793 aa16.01■□□□□ 0.15
PTPN7-207ENST00000468385 C12orf42Q96LP6 360 aa16.01■□□□□ 0.15
PTPN7-207ENST00000468385 SURF6O75683 361 aaKnown RBP16■□□□□ 0.15
PTPN7-207ENST00000468385 CNMDO75829 334 aa16■□□□□ 0.15
PTPN7-207ENST00000468385 GH2P01242 217 aa16■□□□□ 0.15
PTPN7-207ENST00000468385 OS9Q13438 667 aaPredicted RBP16■□□□□ 0.15
PTPN7-207ENST00000468385 TATDN1Q6P1N9 297 aa16■□□□□ 0.15
PTPN7-207ENST00000468385 TDHQ8IZJ6 230 aa16■□□□□ 0.15
PTPN7-207ENST00000468385 APBA2Q99767 749 aa16■□□□□ 0.15
PTPN7-207ENST00000468385 TLR7Q9NYK1 1049 aaKnown RBP16■□□□□ 0.15
PTPN7-207ENST00000468385 DBNLQ9UJU6 430 aaKnown RBP16■□□□□ 0.15
PTPN7-207ENST00000468385 CYP7A1P22680 504 aa15.99■□□□□ 0.15
PTPN7-207ENST00000468385 Q7L0L9 218 aa15.99■□□□□ 0.15
PTPN7-207ENST00000468385 CCAR1Q8IX12 1150 aaKnown RBP15.99■□□□□ 0.15
PTPN7-207ENST00000468385 C1orf115Q9H7X2 142 aa15.99■□□□□ 0.15
PTPN7-207ENST00000468385 NOP58Q9Y2X3 529 aaKnown RBP15.99■□□□□ 0.15
PTPN7-207ENST00000468385 USP17L15C9J2P7 530 aa15.98■□□□□ 0.15
PTPN7-207ENST00000468385 USP17L13C9JLJ4 530 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms