RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 SLC4A4Q9Y6R1 1079 aa13.92□□□□□ -0.18
CDHR3-205ENST00000468143 TTC41PQ6P2S7 1318 aa13.91□□□□□ -0.18
CDHR3-205ENST00000468143 CYP2D7A0A087X1C5 515 aa13.91□□□□□ -0.18
CDHR3-205ENST00000468143 SMIM22K7EJ46 135 aa13.91□□□□□ -0.18
CDHR3-205ENST00000468143 ERC2O15083 957 aa13.91□□□□□ -0.18
CDHR3-205ENST00000468143 RNF113AO15541 343 aaKnown RBP13.91□□□□□ -0.18
CDHR3-205ENST00000468143 MX1P20591 662 aa13.91□□□□□ -0.18
CDHR3-205ENST00000468143 CTGFP29279 349 aa13.91□□□□□ -0.18
CDHR3-205ENST00000468143 SHMT1P34896 483 aa13.91□□□□□ -0.18
CDHR3-205ENST00000468143 MTMR2Q13614 643 aa13.91□□□□□ -0.18
CDHR3-205ENST00000468143 KIF22Q14807 665 aa13.91□□□□□ -0.18
CDHR3-205ENST00000468143 CERKLQ49MI3 558 aaPredicted RBP13.91□□□□□ -0.18
CDHR3-205ENST00000468143 DYNLL2Q96FJ2 89 aa13.91□□□□□ -0.18
CDHR3-205ENST00000468143 WDR18Q9BV38 432 aa13.91□□□□□ -0.18
CDHR3-205ENST00000468143 RWDD1Q9H446 243 aaPredicted RBP13.91□□□□□ -0.18
CDHR3-205ENST00000468143 AGTPBP1Q9UPW5 1226 aa13.91□□□□□ -0.18
CDHR3-205ENST00000468143 SIPA1L1O43166 1804 aa13.91□□□□□ -0.18
CDHR3-205ENST00000468143 DOCK1Q14185 1865 aa13.91□□□□□ -0.18
CDHR3-205ENST00000468143 ADGRA2Q96PE1 1338 aa13.9□□□□□ -0.18
CDHR3-205ENST00000468143 GLRX3O76003 335 aaKnown RBP13.9□□□□□ -0.18
CDHR3-205ENST00000468143 BACE1P56817 501 aa13.9□□□□□ -0.18
CDHR3-205ENST00000468143 RAB3GAP1Q15042 981 aa13.9□□□□□ -0.18
CDHR3-205ENST00000468143 ABCB5Q2M3G0 1257 aa13.9□□□□□ -0.18
CDHR3-205ENST00000468143 PROCA1Q8NCQ7 364 aaPredicted RBP13.9□□□□□ -0.18
CDHR3-205ENST00000468143 SLC44A5Q8NCS7 719 aa13.9□□□□□ -0.18
CDHR3-205ENST00000468143 OSBP2Q969R2 916 aa13.9□□□□□ -0.18
CDHR3-205ENST00000468143 TBC1D2Q9BYX2 928 aa13.9□□□□□ -0.18
CDHR3-205ENST00000468143 ATP8A2Q9NTI2 1148 aa13.9□□□□□ -0.18
CDHR3-205ENST00000468143 CDK5RAP2Q96SN8 1893 aa13.89□□□□□ -0.19
CDHR3-205ENST00000468143 USP17L10C9JJH3 530 aa13.89□□□□□ -0.19
CDHR3-205ENST00000468143 USP17L12C9JPN9 530 aa13.89□□□□□ -0.19
CDHR3-205ENST00000468143 USP17L21D6R901 530 aa13.89□□□□□ -0.19
CDHR3-205ENST00000468143 MPHOSPH10O00566 681 aaKnown RBP13.89□□□□□ -0.19
CDHR3-205ENST00000468143 FMNL1O95466 1100 aaPredicted RBP13.89□□□□□ -0.19
CDHR3-205ENST00000468143 PSMC4P43686 418 aa13.89□□□□□ -0.19
CDHR3-205ENST00000468143 GABPAQ06546 454 aa13.89□□□□□ -0.19
CDHR3-205ENST00000468143 AAMPQ13685 434 aa13.89□□□□□ -0.19
CDHR3-205ENST00000468143 ARHGEF6Q15052 776 aa13.89□□□□□ -0.19
CDHR3-205ENST00000468143 ZYXQ15942 572 aaKnown RBP13.89□□□□□ -0.19
CDHR3-205ENST00000468143 SH3D19Q5HYK7 790 aa13.89□□□□□ -0.19
CDHR3-205ENST00000468143 STK11IPQ8N1F8 1099 aa13.89□□□□□ -0.19
CDHR3-205ENST00000468143 SMCR8Q8TEV9 937 aaPredicted RBP13.89□□□□□ -0.19
CDHR3-205ENST00000468143 STRBPQ96SI9 672 aaKnown RBP13.89□□□□□ -0.19
CDHR3-205ENST00000468143 FSD1Q9BTV5 496 aa13.89□□□□□ -0.19
CDHR3-205ENST00000468143 LNPKQ9C0E8 428 aa13.89□□□□□ -0.19
CDHR3-205ENST00000468143 CABP5Q9NP86 173 aa13.89□□□□□ -0.19
CDHR3-205ENST00000468143 GINM1Q9NU53 330 aa13.89□□□□□ -0.19
CDHR3-205ENST00000468143 TMOD4Q9NZQ9 345 aa13.89□□□□□ -0.19
CDHR3-205ENST00000468143 SLC45A1Q9Y2W3 748 aa13.89□□□□□ -0.19
CDHR3-205ENST00000468143 PTCH2Q9Y6C5 1203 aa13.89□□□□□ -0.19
CDHR3-205ENST00000468143 SALL3Q9BXA9 1300 aa13.89□□□□□ -0.19
CDHR3-205ENST00000468143 FOCADQ5VW36 1801 aa13.88□□□□□ -0.19
CDHR3-205ENST00000468143 M0R2C6 588 aa13.88□□□□□ -0.19
CDHR3-205ENST00000468143 BCRP11274 1271 aa13.88□□□□□ -0.19
CDHR3-205ENST00000468143 OSBPP22059 807 aa13.88□□□□□ -0.19
CDHR3-205ENST00000468143 C12orf60Q5U649 245 aa13.88□□□□□ -0.19
CDHR3-205ENST00000468143 CTR9Q6PD62 1173 aa13.88□□□□□ -0.19
CDHR3-205ENST00000468143 ANKRD13CQ8N6S4 541 aa13.88□□□□□ -0.19
CDHR3-205ENST00000468143 APPBP2Q92624 585 aa13.88□□□□□ -0.19
CDHR3-205ENST00000468143 DDRGK1Q96HY6 314 aa13.88□□□□□ -0.19
CDHR3-205ENST00000468143 TRIM47Q96LD4 638 aa13.88□□□□□ -0.19
CDHR3-205ENST00000468143 SEC62Q99442 399 aaKnown RBP13.88□□□□□ -0.19
CDHR3-205ENST00000468143 EMILIN3Q9NT22 766 aa13.88□□□□□ -0.19
CDHR3-205ENST00000468143 C19orf81C9J6K1 198 aa13.87□□□□□ -0.19
CDHR3-205ENST00000468143 ZFYP08048 801 aaPredicted RBP13.87□□□□□ -0.19
CDHR3-205ENST00000468143 GUCY1A2P33402 732 aa13.87□□□□□ -0.19
CDHR3-205ENST00000468143 PDE1AP54750 535 aa13.87□□□□□ -0.19
CDHR3-205ENST00000468143 SEPT2Q15019 361 aa13.87□□□□□ -0.19
CDHR3-205ENST00000468143 ACER1Q8TDN7 264 aa13.87□□□□□ -0.19
CDHR3-205ENST00000468143 ASCC2Q9H1I8 757 aaPredicted RBP13.87□□□□□ -0.19
CDHR3-205ENST00000468143 PNMA3Q9UL41 463 aa13.87□□□□□ -0.19
CDHR3-205ENST00000468143 PHIPQ8WWQ0 1821 aa13.87□□□□□ -0.19
CDHR3-205ENST00000468143 GSG1L2A8MUP6 293 aa13.86□□□□□ -0.19
CDHR3-205ENST00000468143 GPAA1O43292 621 aa13.86□□□□□ -0.19
CDHR3-205ENST00000468143 PEX10O60683 326 aa13.86□□□□□ -0.19
CDHR3-205ENST00000468143 MYCP01106 439 aaPredicted RBP13.86□□□□□ -0.19
CDHR3-205ENST00000468143 APPP05067 770 aa13.86□□□□□ -0.19
CDHR3-205ENST00000468143 CDK8P49336 464 aa13.86□□□□□ -0.19
CDHR3-205ENST00000468143 PABPC4Q13310 644 aaKnown RBP eCLIP13.86□□□□□ -0.19
CDHR3-205ENST00000468143 USP17L2Q6R6M4 530 aa13.86□□□□□ -0.19
CDHR3-205ENST00000468143 SMC5Q8IY18 1101 aa13.86□□□□□ -0.19
CDHR3-205ENST00000468143 AMOTL1Q8IY63 956 aa13.86□□□□□ -0.19
CDHR3-205ENST00000468143 P2RX7Q99572 595 aaKnown RBP13.86□□□□□ -0.19
CDHR3-205ENST00000468143 FEZ1Q99689 392 aa13.86□□□□□ -0.19
CDHR3-205ENST00000468143 STAP2Q9UGK3 403 aa13.86□□□□□ -0.19
CDHR3-205ENST00000468143 MYH1P12882 1939 aa13.86□□□□□ -0.19
CDHR3-205ENST00000468143 MINDY4BA8MYZ0 360 aa13.85□□□□□ -0.19
CDHR3-205ENST00000468143 AKR1B1P15121 316 aa13.85□□□□□ -0.19
CDHR3-205ENST00000468143 RGS19P49795 217 aa13.85□□□□□ -0.19
CDHR3-205ENST00000468143 FCGRTP55899 365 aa13.85□□□□□ -0.19
CDHR3-205ENST00000468143 IRX3P78415 501 aaPredicted RBP13.85□□□□□ -0.19
CDHR3-205ENST00000468143 LRRFIP1Q32MZ4 808 aaKnown RBP13.85□□□□□ -0.19
CDHR3-205ENST00000468143 CHD1LQ86WJ1 897 aa13.85□□□□□ -0.19
CDHR3-205ENST00000468143 SH3TC2Q8TF17 1288 aa13.85□□□□□ -0.19
CDHR3-205ENST00000468143 SRRDQ9UH36 339 aa13.85□□□□□ -0.19
CDHR3-205ENST00000468143 SWAP70Q9UH65 585 aa13.85□□□□□ -0.19
CDHR3-205ENST00000468143 A0A1W2PRG0 241 aa13.84□□□□□ -0.19
CDHR3-205ENST00000468143 GNRH1P01148 92 aa13.84□□□□□ -0.19
CDHR3-205ENST00000468143 HOXD10P28358 340 aa13.84□□□□□ -0.19
CDHR3-205ENST00000468143 HOXA7P31268 230 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms