RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 SIRT2Q8IXJ6 389 aa12.6□□□□□ -0.39
SSR3-205ENST00000467789 EFCAB3Q8N7B9 438 aa12.6□□□□□ -0.39
SSR3-205ENST00000467789 PROCA1Q8NCQ7 364 aaPredicted RBP12.6□□□□□ -0.39
SSR3-205ENST00000467789 TGFBRAP1Q8WUH2 860 aa12.6□□□□□ -0.39
SSR3-205ENST00000467789 ARMC5Q96C12 935 aa12.6□□□□□ -0.39
SSR3-205ENST00000467789 IL1RAPL2Q9NP60 686 aa12.6□□□□□ -0.39
SSR3-205ENST00000467789 RBBP6Q7Z6E9 1792 aaKnown RBP12.6□□□□□ -0.39
SSR3-205ENST00000467789 FLT1P17948 1338 aa12.6□□□□□ -0.39
SSR3-205ENST00000467789 ADGRA2Q96PE1 1338 aa12.6□□□□□ -0.39
SSR3-205ENST00000467789 ASNSP08243 561 aa12.59□□□□□ -0.39
SSR3-205ENST00000467789 HOXD10P28358 340 aa12.59□□□□□ -0.39
SSR3-205ENST00000467789 GPAT2Q6NUI2 795 aa12.59□□□□□ -0.39
SSR3-205ENST00000467789 TRIM34Q9BYJ4 488 aa12.59□□□□□ -0.39
SSR3-205ENST00000467789 AS3MTQ9HBK9 375 aa12.59□□□□□ -0.39
SSR3-205ENST00000467789 PNMA3Q9UL41 463 aa12.59□□□□□ -0.39
SSR3-205ENST00000467789 MYH1P12882 1939 aa12.58□□□□□ -0.39
SSR3-205ENST00000467789 SIPA1L1O43166 1804 aa12.58□□□□□ -0.4
SSR3-205ENST00000467789 USP17L5A8MUK1 530 aa12.58□□□□□ -0.4
SSR3-205ENST00000467789 PABPC4Q13310 644 aaKnown RBP eCLIP12.58□□□□□ -0.46e-9■□□□□ 10.8
SSR3-205ENST00000467789 GADL1Q6ZQY3 521 aa12.58□□□□□ -0.4
SSR3-205ENST00000467789 MAPKAPK5Q8IW41 473 aa12.58□□□□□ -0.4
SSR3-205ENST00000467789 CRACR2BQ8N4Y2 399 aaPredicted RBP12.58□□□□□ -0.4
SSR3-205ENST00000467789 MAGEB6Q8N7X4 407 aa12.58□□□□□ -0.4
SSR3-205ENST00000467789 ZNF280CQ8ND82 737 aa12.58□□□□□ -0.4
SSR3-205ENST00000467789 AGTPBP1Q9UPW5 1226 aa12.58□□□□□ -0.4
SSR3-205ENST00000467789 LOC285556D6RIA3 1793 aa12.57□□□□□ -0.4
SSR3-205ENST00000467789 TRIM75PA6NK02 468 aa12.57□□□□□ -0.4
SSR3-205ENST00000467789 FAM196BA6NMK8 535 aa12.57□□□□□ -0.4
SSR3-205ENST00000467789 BCRP11274 1271 aa12.57□□□□□ -0.4
SSR3-205ENST00000467789 SLC9C1Q4G0N8 1177 aa12.57□□□□□ -0.4
SSR3-205ENST00000467789 TTC6Q86TZ1 520 aa12.57□□□□□ -0.4
SSR3-205ENST00000467789 WDR18Q9BV38 432 aa12.57□□□□□ -0.4
SSR3-205ENST00000467789 LRRCC1Q9C099 1032 aa12.57□□□□□ -0.4
SSR3-205ENST00000467789 EHD4Q9H223 541 aa12.57□□□□□ -0.4
SSR3-205ENST00000467789 ANTXR1Q9H6X2 564 aa12.57□□□□□ -0.4
SSR3-205ENST00000467789 CPA4Q9UI42 421 aa12.57□□□□□ -0.4
SSR3-205ENST00000467789 PALD1Q9ULE6 856 aa12.57□□□□□ -0.4
SSR3-205ENST00000467789 PDE4DIPQ5VU43 2346 aa12.57□□□□□ -0.4
SSR3-205ENST00000467789 CENPFP49454 3210 aa12.56□□□□□ -0.4
SSR3-205ENST00000467789 APBB1O00213 710 aa12.56□□□□□ -0.4
SSR3-205ENST00000467789 ATP5JP18859 108 aa12.56□□□□□ -0.4
SSR3-205ENST00000467789 PSMC4P43686 418 aa12.56□□□□□ -0.4
SSR3-205ENST00000467789 USP5P45974 858 aa12.56□□□□□ -0.4
SSR3-205ENST00000467789 CAP1Q01518 475 aa12.56□□□□□ -0.4
SSR3-205ENST00000467789 SPP2Q13103 211 aa12.56□□□□□ -0.4
SSR3-205ENST00000467789 SH3D19Q5HYK7 790 aa12.56□□□□□ -0.4
SSR3-205ENST00000467789 SLC9C2Q5TAH2 1124 aa12.56□□□□□ -0.4
SSR3-205ENST00000467789 C20orf194Q5TEA3 1177 aa12.56□□□□□ -0.4
SSR3-205ENST00000467789 MIGA1Q8NAN2 632 aa12.56□□□□□ -0.4
SSR3-205ENST00000467789 SMCR8Q8TEV9 937 aaPredicted RBP12.56□□□□□ -0.4
SSR3-205ENST00000467789 ZNF333Q96JL9 665 aa12.56□□□□□ -0.4
SSR3-205ENST00000467789 PTCH2Q9Y6C5 1203 aa12.56□□□□□ -0.4
SSR3-205ENST00000467789 MGAMO43451 1857 aa12.55□□□□□ -0.4
SSR3-205ENST00000467789 MAGEB6P1A0A0J9YX57 407 aa12.55□□□□□ -0.4
SSR3-205ENST00000467789 C19orf81C9J6K1 198 aa12.55□□□□□ -0.4
SSR3-205ENST00000467789 FMNL1O95466 1100 aaPredicted RBP12.55□□□□□ -0.4
SSR3-205ENST00000467789 SLURP2P0DP57 97 aa12.55□□□□□ -0.4
SSR3-205ENST00000467789 CYP2C8P10632 490 aa12.55□□□□□ -0.4
SSR3-205ENST00000467789 FCGRTP55899 365 aa12.55□□□□□ -0.4
SSR3-205ENST00000467789 DYNLL1P63167 89 aaKnown RBP12.55□□□□□ -0.4
SSR3-205ENST00000467789 RIOK1Q9BRS2 568 aaKnown RBP12.55□□□□□ -0.4
SSR3-205ENST00000467789 CRNKL1Q9BZJ0 848 aaKnown RBP12.55□□□□□ -0.4
SSR3-205ENST00000467789 ARHGAP39Q9C0H5 1083 aa12.55□□□□□ -0.4
SSR3-205ENST00000467789 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.55□□□□□ -0.4
SSR3-205ENST00000467789 DNAJC18Q9H819 358 aa12.55□□□□□ -0.4
SSR3-205ENST00000467789 SRRDQ9UH36 339 aa12.55□□□□□ -0.4
SSR3-205ENST00000467789 SERPINB13Q9UIV8 391 aa12.55□□□□□ -0.4
SSR3-205ENST00000467789 NDUFB9Q9Y6M9 179 aa12.55□□□□□ -0.4
SSR3-205ENST00000467789 KIAA0100Q14667 2235 aaKnown RBP12.54□□□□□ -0.4
SSR3-205ENST00000467789 GOLIM4O00461 696 aa12.54□□□□□ -0.4
SSR3-205ENST00000467789 PDE6AP16499 860 aa12.54□□□□□ -0.4
SSR3-205ENST00000467789 GCLCP48506 637 aaPredicted RBP12.54□□□□□ -0.4
SSR3-205ENST00000467789 BACE1P56817 501 aa12.54□□□□□ -0.4
SSR3-205ENST00000467789 TATDN1Q6P1N9 297 aa12.54□□□□□ -0.4
SSR3-205ENST00000467789 TRIM47Q96LD4 638 aa12.54□□□□□ -0.4
SSR3-205ENST00000467789 DNAJC2Q99543 621 aaKnown RBP12.54□□□□□ -0.4
SSR3-205ENST00000467789 HAUS7Q99871 368 aa12.54□□□□□ -0.4
SSR3-205ENST00000467789 PAG1Q9NWQ8 432 aa12.54□□□□□ -0.4
SSR3-205ENST00000467789 DDX60LQ5H9U9 1706 aaKnown RBP12.54□□□□□ -0.4
SSR3-205ENST00000467789 ZSWIM8A7E2V4 1837 aa12.53□□□□□ -0.4
SSR3-205ENST00000467789 USP17L10C9JJH3 530 aa12.53□□□□□ -0.4
SSR3-205ENST00000467789 OSBPP22059 807 aa12.53□□□□□ -0.4
SSR3-205ENST00000467789 HMGCS2P54868 508 aa12.53□□□□□ -0.4
SSR3-205ENST00000467789 RRP1BQ14684 758 aaKnown RBP12.53□□□□□ -0.4
SSR3-205ENST00000467789 FAM110CQ1W6H9 321 aa12.53□□□□□ -0.4
SSR3-205ENST00000467789 ZSCAN25Q6NSZ9 544 aa12.53□□□□□ -0.4
SSR3-205ENST00000467789 RAET1EQ8TD07 263 aa12.53□□□□□ -0.4
SSR3-205ENST00000467789 DCTPP1Q9H773 170 aa12.53□□□□□ -0.4
SSR3-205ENST00000467789 TMOD4Q9NZQ9 345 aa12.53□□□□□ -0.4
SSR3-205ENST00000467789 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.53□□□□□ -0.4
SSR3-205ENST00000467789 SAP30BPQ9UHR5 308 aaKnown RBP12.53□□□□□ -0.4
SSR3-205ENST00000467789 ZBTB21Q9ULJ3 1066 aa12.53□□□□□ -0.4
SSR3-205ENST00000467789 ZNF532Q9HCE3 1301 aa12.53□□□□□ -0.4
SSR3-205ENST00000467789 NAV1Q8NEY1 1877 aa12.53□□□□□ -0.4
SSR3-205ENST00000467789 MYH7P12883 1935 aa12.52□□□□□ -0.4
SSR3-205ENST00000467789 TCRBV5S4A2TA0A5A2 114 aa12.52□□□□□ -0.41
SSR3-205ENST00000467789 SEC24BO95487 1268 aa12.52□□□□□ -0.41
SSR3-205ENST00000467789 HOXA7P31268 230 aaPredicted RBP12.52□□□□□ -0.41
SSR3-205ENST00000467789 TREML2Q5T2D2 321 aa12.52□□□□□ -0.41
SSR3-205ENST00000467789 CCDC84Q86UT8 332 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms