RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 SEMA3EO15041 775 aa16.92■□□□□ 0.3
PRPF38B-204ENST00000467302 MYO1BO43795 1136 aa16.92■□□□□ 0.3
PRPF38B-204ENST00000467302 CUTAO60888 179 aa16.92■□□□□ 0.3
PRPF38B-204ENST00000467302 GNAT2P19087 354 aa16.92■□□□□ 0.3
PRPF38B-204ENST00000467302 UBASH3AP57075 661 aa16.92■□□□□ 0.3
PRPF38B-204ENST00000467302 SYT10Q6XYQ8 523 aa16.92■□□□□ 0.3
PRPF38B-204ENST00000467302 MICU3Q86XE3 530 aa16.92■□□□□ 0.3
PRPF38B-204ENST00000467302 FOXP4Q8IVH2 680 aaPredicted RBP16.92■□□□□ 0.3
PRPF38B-204ENST00000467302 ELOA2Q8IYF1 753 aaPredicted RBP16.92■□□□□ 0.3
PRPF38B-204ENST00000467302 DPF2Q92785 391 aa16.92■□□□□ 0.3
PRPF38B-204ENST00000467302 FAM84BQ96KN1 310 aaPredicted RBP16.92■□□□□ 0.3
PRPF38B-204ENST00000467302 NAPBQ9H115 298 aa16.92■□□□□ 0.3
PRPF38B-204ENST00000467302 CBFA2T2O43439 604 aa16.92■□□□□ 0.3
PRPF38B-204ENST00000467302 IARSP41252 1262 aaKnown RBP16.92■□□□□ 0.3
PRPF38B-204ENST00000467302 LIFRP42702 1097 aa16.92■□□□□ 0.3
PRPF38B-204ENST00000467302 GABPB1Q06547 395 aaPredicted RBP16.92■□□□□ 0.3
PRPF38B-204ENST00000467302 ABCF2Q9UG63 623 aa16.92■□□□□ 0.3
PRPF38B-204ENST00000467302 PDS5AQ29RF7 1337 aaKnown RBP16.92■□□□□ 0.3
PRPF38B-204ENST00000467302 STK36Q9NRP7 1315 aa16.92■□□□□ 0.3
PRPF38B-204ENST00000467302 CYP7A1P22680 504 aa16.91■□□□□ 0.3
PRPF38B-204ENST00000467302 TM4SF1P30408 202 aa16.91■□□□□ 0.3
PRPF38B-204ENST00000467302 GNL2Q13823 731 aaKnown RBP16.91■□□□□ 0.3
PRPF38B-204ENST00000467302 LONRF3Q496Y0 759 aa16.91■□□□□ 0.3
PRPF38B-204ENST00000467302 KRBA2Q6ZNG9 492 aa16.91■□□□□ 0.3
PRPF38B-204ENST00000467302 VSTM4Q8IW00 320 aa16.91■□□□□ 0.3
PRPF38B-204ENST00000467302 RAI14Q9P0K7 980 aa16.91■□□□□ 0.3
PRPF38B-204ENST00000467302 MAST2Q6P0Q8 1798 aa16.91■□□□□ 0.3
PRPF38B-204ENST00000467302 GOLGA8AA7E2F4 631 aa16.91■□□□□ 0.3
PRPF38B-204ENST00000467302 GSG1L2A8MUP6 293 aa16.91■□□□□ 0.3
PRPF38B-204ENST00000467302 MDM2Q00987 491 aaPredicted RBP16.91■□□□□ 0.3
PRPF38B-204ENST00000467302 TMEM67Q5HYA8 995 aa16.91■□□□□ 0.3
PRPF38B-204ENST00000467302 FBXO33Q7Z6M2 555 aa16.91■□□□□ 0.3
PRPF38B-204ENST00000467302 NACAP1Q9BZK3 213 aa16.91■□□□□ 0.3
PRPF38B-204ENST00000467302 EPB41L4AQ9HCS5 686 aaPredicted RBP16.91■□□□□ 0.3
PRPF38B-204ENST00000467302 KCNH3Q9ULD8 1083 aa16.91■□□□□ 0.3
PRPF38B-204ENST00000467302 SLC4A4Q9Y6R1 1079 aa16.91■□□□□ 0.3
PRPF38B-204ENST00000467302 NID2Q14112 1375 aa16.9■□□□□ 0.3
PRPF38B-204ENST00000467302 UBE2Q2LH0YL09 131 aa16.9■□□□□ 0.3
PRPF38B-204ENST00000467302 CCP110O43303 1012 aa16.9■□□□□ 0.3
PRPF38B-204ENST00000467302 TRIM37O94972 964 aa16.9■□□□□ 0.3
PRPF38B-204ENST00000467302 H2AFXP16104 143 aaPredicted RBP16.9■□□□□ 0.3
PRPF38B-204ENST00000467302 BMP6P22004 513 aa16.9■□□□□ 0.3
PRPF38B-204ENST00000467302 ETF1P62495 437 aaKnown RBP16.9■□□□□ 0.3
PRPF38B-204ENST00000467302 TRIM29Q14134 588 aa16.9■□□□□ 0.3
PRPF38B-204ENST00000467302 KRT222Q8N1A0 295 aa16.9■□□□□ 0.3
PRPF38B-204ENST00000467302 LCORLQ8N3X6 602 aa16.9■□□□□ 0.3
PRPF38B-204ENST00000467302 INCENPQ9NQS7 918 aa16.9■□□□□ 0.3
PRPF38B-204ENST00000467302 PCDHA5Q9Y5H7 936 aa16.9■□□□□ 0.3
PRPF38B-204ENST00000467302 CACNA1SQ13698 1873 aa16.9■□□□□ 0.3
PRPF38B-204ENST00000467302 ZBTB22O15209 634 aa16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 PRKAB2O43741 272 aa16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 FMNL1O95466 1100 aaPredicted RBP16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 SERPINC1P01008 464 aa16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 GYS1P13807 737 aa16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 GRAPQ13588 217 aa16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 TRIM65Q6PJ69 517 aa16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 NFXL1Q6ZNB6 911 aa16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 MIGA1Q8NAN2 632 aa16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 LRRN4CLQ8ND94 238 aa16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 GRAPLQ8TC17 118 aaPredicted RBP16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 MYL10Q9BUA6 226 aa16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 ZSWIM5Q9P217 1185 aa16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.89■□□□□ 0.293e-9■□□□□ 10.1
PRPF38B-204ENST00000467302 TACC3Q9Y6A5 838 aa16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 PHLPP2Q6ZVD8 1323 aa16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 ECM29Q5VYK3 1845 aa16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 HIBADHP31937 336 aaKnown RBP16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 OLFM4Q6UX06 510 aa16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 NOSTRINQ8IVI9 506 aa16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 STK11IPQ8N1F8 1099 aa16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 KRI1Q8N9T8 703 aaKnown RBP16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 CNNM3Q8NE01 707 aa16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 INTS13Q9NVM9 706 aa16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 FANCLQ9NW38 375 aa16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 ZNF446Q9NWS9 450 aa16.89■□□□□ 0.29
PRPF38B-204ENST00000467302 IFNAR1P17181 557 aa16.88■□□□□ 0.29
PRPF38B-204ENST00000467302 TDO2P48775 406 aa16.88■□□□□ 0.29
PRPF38B-204ENST00000467302 TOB1P50616 345 aaPredicted RBP16.88■□□□□ 0.29
PRPF38B-204ENST00000467302 PDE4BQ07343 736 aa16.88■□□□□ 0.29
PRPF38B-204ENST00000467302 SSRP1Q08945 709 aaKnown RBP16.88■□□□□ 0.29
PRPF38B-204ENST00000467302 ERCC6LQ2NKX8 1250 aa16.88■□□□□ 0.29
PRPF38B-204ENST00000467302 CFAP100Q494V2 611 aa16.88■□□□□ 0.29
PRPF38B-204ENST00000467302 ZNF772Q68DY9 489 aaPredicted RBP16.88■□□□□ 0.29
PRPF38B-204ENST00000467302 PRR5LQ6MZQ0 368 aa16.88■□□□□ 0.29
PRPF38B-204ENST00000467302 FCHSD1Q86WN1 690 aa16.88■□□□□ 0.29
PRPF38B-204ENST00000467302 TMEM139Q8IV31 216 aa16.88■□□□□ 0.29
PRPF38B-204ENST00000467302 SLC26A6Q9BXS9 759 aa16.88■□□□□ 0.29
PRPF38B-204ENST00000467302 SLC12A7Q9Y666 1083 aa16.88■□□□□ 0.29
PRPF38B-204ENST00000467302 MAGEB6P1A0A0J9YX57 407 aa16.87■□□□□ 0.29
PRPF38B-204ENST00000467302 TMEM232C9JQI7 657 aa16.87■□□□□ 0.29
PRPF38B-204ENST00000467302 ST5P78524 1137 aa16.87■□□□□ 0.29
PRPF38B-204ENST00000467302 CTDSPL2Q05D32 466 aa16.87■□□□□ 0.29
PRPF38B-204ENST00000467302 REXO1L1PQ8IX06 675 aa16.87■□□□□ 0.29
PRPF38B-204ENST00000467302 CNNM2Q9H8M5 875 aa16.87■□□□□ 0.29
PRPF38B-204ENST00000467302 IFIT3O14879 490 aaKnown RBP16.87■□□□□ 0.29
PRPF38B-204ENST00000467302 FANCGO15287 622 aa16.87■□□□□ 0.29
PRPF38B-204ENST00000467302 IGSF3O75054 1194 aa16.87■□□□□ 0.29
PRPF38B-204ENST00000467302 MMP1P03956 469 aa16.87■□□□□ 0.29
PRPF38B-204ENST00000467302 SLFN14P0C7P3 912 aa16.87■□□□□ 0.29
PRPF38B-204ENST00000467302 KLRK1P26718 216 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms