RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 GJA5P36382 358 aa16.57■□□□□ 0.24
UBA3-209ENST00000466763 SBK1Q52WX2 424 aa16.57■□□□□ 0.24
UBA3-209ENST00000466763 CCDC84Q86UT8 332 aaPredicted RBP16.57■□□□□ 0.24
UBA3-209ENST00000466763 METTL16Q86W50 562 aaKnown RBP16.57■□□□□ 0.24
UBA3-209ENST00000466763 PIP4P2Q8N4L2 257 aa16.57■□□□□ 0.24
UBA3-209ENST00000466763 ZHX2Q9Y6X8 837 aa16.57■□□□□ 0.24
UBA3-209ENST00000466763 DDX60LQ5H9U9 1706 aaKnown RBP16.56■□□□□ 0.24
UBA3-209ENST00000466763 SHMT1P34896 483 aa16.56■□□□□ 0.24
UBA3-209ENST00000466763 CDK8P49336 464 aa16.56■□□□□ 0.24
UBA3-209ENST00000466763 PPATQ06203 517 aa16.56■□□□□ 0.24
UBA3-209ENST00000466763 GABPAQ06546 454 aa16.56■□□□□ 0.24
UBA3-209ENST00000466763 BEGAINQ9BUH8 593 aa16.56■□□□□ 0.24
UBA3-209ENST00000466763 MKNK2Q9HBH9 465 aa16.56■□□□□ 0.24
UBA3-209ENST00000466763 CABP5Q9NP86 173 aa16.56■□□□□ 0.24
UBA3-209ENST00000466763 SWAP70Q9UH65 585 aa16.56■□□□□ 0.24
UBA3-209ENST00000466763 DOCK1Q14185 1865 aa16.55■□□□□ 0.24
UBA3-209ENST00000466763 MANSC4A6NHS7 340 aaPredicted RBP16.55■□□□□ 0.24
UBA3-209ENST00000466763 IRF6O14896 467 aa16.55■□□□□ 0.24
UBA3-209ENST00000466763 GH2P01242 217 aa16.55■□□□□ 0.24
UBA3-209ENST00000466763 SLC3A2P08195 630 aaKnown RBP16.55■□□□□ 0.24
UBA3-209ENST00000466763 PTPRAP18433 802 aa16.55■□□□□ 0.24
UBA3-209ENST00000466763 MAP2K1Q02750 393 aaPredicted RBP16.55■□□□□ 0.24
UBA3-209ENST00000466763 PPIL2Q13356 520 aa16.55■□□□□ 0.24
UBA3-209ENST00000466763 ABCB5Q2M3G0 1257 aa16.55■□□□□ 0.24
UBA3-209ENST00000466763 SHROOM1Q2M3G4 852 aaPredicted RBP16.55■□□□□ 0.24
UBA3-209ENST00000466763 TATDN1Q6P1N9 297 aa16.55■□□□□ 0.24
UBA3-209ENST00000466763 ZBTB21Q9ULJ3 1066 aa16.55■□□□□ 0.24
UBA3-209ENST00000466763 MYH8P13535 1937 aa16.55■□□□□ 0.24
UBA3-209ENST00000466763 ATAD5Q96QE3 1844 aa16.54■□□□□ 0.24
UBA3-209ENST00000466763 USP17L5A8MUK1 530 aa16.54■□□□□ 0.24
UBA3-209ENST00000466763 FOXP2O15409 715 aa16.54■□□□□ 0.24
UBA3-209ENST00000466763 FGAP02671 866 aa16.54■□□□□ 0.24
UBA3-209ENST00000466763 ASNSP08243 561 aa16.54■□□□□ 0.24
UBA3-209ENST00000466763 JAG1P78504 1218 aa16.54■□□□□ 0.24
UBA3-209ENST00000466763 CTDSPL2Q05D32 466 aa16.54■□□□□ 0.24
UBA3-209ENST00000466763 PPARAQ07869 468 aa16.54■□□□□ 0.24
UBA3-209ENST00000466763 SREBF2Q12772 1141 aa16.54■□□□□ 0.24
UBA3-209ENST00000466763 RAB3GAP1Q15042 981 aa16.54■□□□□ 0.24
UBA3-209ENST00000466763 CASC1Q6TDU7 716 aa16.54■□□□□ 0.24
UBA3-209ENST00000466763 C16orf86Q6ZW13 317 aa16.54■□□□□ 0.24
UBA3-209ENST00000466763 JMYQ8N9B5 988 aa16.54■□□□□ 0.24
UBA3-209ENST00000466763 RAD50Q92878 1312 aa16.53■□□□□ 0.24
UBA3-209ENST00000466763 CCL15-CCL14A0A0B4J2E2 113 aa16.53■□□□□ 0.24
UBA3-209ENST00000466763 TRIM75PA6NK02 468 aa16.53■□□□□ 0.24
UBA3-209ENST00000466763 GTF2A2P52657 109 aa16.53■□□□□ 0.24
UBA3-209ENST00000466763 HAND2P61296 217 aa16.53■□□□□ 0.24
UBA3-209ENST00000466763 SNAPC2Q13487 334 aa16.53■□□□□ 0.24
UBA3-209ENST00000466763 ALX1Q15699 326 aa16.53■□□□□ 0.24
UBA3-209ENST00000466763 CCL15Q16663 113 aa16.53■□□□□ 0.24
UBA3-209ENST00000466763 IL25Q9H293 177 aa16.53■□□□□ 0.24
UBA3-209ENST00000466763 AS3MTQ9HBK9 375 aa16.53■□□□□ 0.24
UBA3-209ENST00000466763 CDC45O75419 566 aa16.52■□□□□ 0.24
UBA3-209ENST00000466763 PRDM1O75626 825 aa16.52■□□□□ 0.24
UBA3-209ENST00000466763 CETPP11597 493 aa16.52■□□□□ 0.24
UBA3-209ENST00000466763 AKR1B1P15121 316 aa16.52■□□□□ 0.24
UBA3-209ENST00000466763 INHBEP58166 350 aa16.52■□□□□ 0.24
UBA3-209ENST00000466763 PDE4BQ07343 736 aa16.52■□□□□ 0.24
UBA3-209ENST00000466763 SPP2Q13103 211 aa16.52■□□□□ 0.24
UBA3-209ENST00000466763 KIAA1211Q6ZU35 1233 aa16.52■□□□□ 0.24
UBA3-209ENST00000466763 ZNF444Q8N0Y2 327 aaPredicted RBP16.52■□□□□ 0.24
UBA3-209ENST00000466763 ZNF287Q9HBT7 754 aa16.52■□□□□ 0.24
UBA3-209ENST00000466763 TOMM22Q9NS69 142 aa16.52■□□□□ 0.24
UBA3-209ENST00000466763 GINM1Q9NU53 330 aa16.52■□□□□ 0.24
UBA3-209ENST00000466763 LAMB1P07942 1786 aa16.51■□□□□ 0.23
UBA3-209ENST00000466763 SGSM2O43147 1006 aa16.51■□□□□ 0.23
UBA3-209ENST00000466763 HSPA1AP0DMV8 641 aaKnown RBP16.51■□□□□ 0.23
UBA3-209ENST00000466763 HSPA1BP0DMV9 641 aaKnown RBP16.51■□□□□ 0.23
UBA3-209ENST00000466763 SEPT2Q15019 361 aa16.51■□□□□ 0.23
UBA3-209ENST00000466763 GADL1Q6ZQY3 521 aa16.51■□□□□ 0.23
UBA3-209ENST00000466763 ZNF280CQ8ND82 737 aa16.51■□□□□ 0.23
UBA3-209ENST00000466763 CCDC17Q96LX7 622 aa16.51■□□□□ 0.23
UBA3-209ENST00000466763 ESYT1Q9BSJ8 1104 aa16.51■□□□□ 0.23
UBA3-209ENST00000466763 DSCC1Q9BVC3 393 aa16.51■□□□□ 0.23
UBA3-209ENST00000466763 WBP1LQ9NX94 342 aa16.51■□□□□ 0.23
UBA3-209ENST00000466763 TAOK2Q9UL54 1235 aa16.51■□□□□ 0.23
UBA3-209ENST00000466763 AFG3L2Q9Y4W6 797 aa16.51■□□□□ 0.23
UBA3-209ENST00000466763 CXCL11O14625 94 aa16.5■□□□□ 0.23
UBA3-209ENST00000466763 ZNF213O14771 459 aa16.5■□□□□ 0.23
UBA3-209ENST00000466763 TRPA1O75762 1119 aa16.5■□□□□ 0.23
UBA3-209ENST00000466763 TM4SF4P48230 202 aa16.5■□□□□ 0.23
UBA3-209ENST00000466763 ATP2B2Q01814 1243 aa16.5■□□□□ 0.23
UBA3-209ENST00000466763 RRP12Q5JTH9 1297 aaKnown RBP16.5■□□□□ 0.23
UBA3-209ENST00000466763 OTUD7BQ6GQQ9 843 aa16.5■□□□□ 0.23
UBA3-209ENST00000466763 BRI3BPQ8WY22 251 aa16.5■□□□□ 0.23
UBA3-209ENST00000466763 MS4A4AQ96JQ5 239 aa16.5■□□□□ 0.23
UBA3-209ENST00000466763 FEZ1Q99689 392 aa16.5■□□□□ 0.23
UBA3-209ENST00000466763 INCENPQ9NQS7 918 aa16.5■□□□□ 0.23
UBA3-209ENST00000466763 CTNNA3Q9UI47 895 aa16.5■□□□□ 0.23
UBA3-209ENST00000466763 KCNH4Q9UQ05 1017 aa16.5■□□□□ 0.23
UBA3-209ENST00000466763 PTH1RQ03431 593 aa16.49■□□□□ 0.23
UBA3-209ENST00000466763 TMEM179Q6ZVK1 233 aa16.49■□□□□ 0.23
UBA3-209ENST00000466763 IFNL1Q8IU54 200 aa16.49■□□□□ 0.23
UBA3-209ENST00000466763 TBC1D2Q9BYX2 928 aa16.49■□□□□ 0.23
UBA3-209ENST00000466763 TSKSQ9UJT2 592 aa16.49■□□□□ 0.23
UBA3-209ENST00000466763 GTF3C3Q9Y5Q9 886 aa16.49■□□□□ 0.23
UBA3-209ENST00000466763 ROBO3Q96MS0 1386 aa16.49■□□□□ 0.23
UBA3-209ENST00000466763 PHIPQ8WWQ0 1821 aa16.48■□□□□ 0.23
UBA3-209ENST00000466763 IGF2BP3O00425 579 aaKnown RBP eCLIP16.48■□□□□ 0.23
UBA3-209ENST00000466763 RASA1P20936 1047 aa16.48■□□□□ 0.23
UBA3-209ENST00000466763 GUCY1A2P33402 732 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms