RNA–Protein interactions for RNA: ENST00000466684.5

BRD9-201, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 1,417 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-201ENST00000466684 HLA-DOAP06340 250 aa19.91■□□□□ 0.78
BRD9-201ENST00000466684 ZKSCAN2Q63HK3 967 aa19.91■□□□□ 0.78
BRD9-201ENST00000466684 ADGRA1Q86SQ6 560 aa19.91■□□□□ 0.78
BRD9-201ENST00000466684 TMEM57Q8N5G2 664 aa19.91■□□□□ 0.78
BRD9-201ENST00000466684 SSH3Q8TE77 659 aa19.91■□□□□ 0.78
BRD9-201ENST00000466684 DIS3LQ8TF46 1054 aaKnown RBP19.91■□□□□ 0.78
BRD9-201ENST00000466684 SOCS4Q8WXH5 440 aa19.91■□□□□ 0.78
BRD9-201ENST00000466684 P2RX7Q99572 595 aaKnown RBP19.91■□□□□ 0.78
BRD9-201ENST00000466684 NBPF3Q9H094 633 aa19.91■□□□□ 0.78
BRD9-201ENST00000466684 DNAJC18Q9H819 358 aa19.91■□□□□ 0.78
BRD9-201ENST00000466684 PALD1Q9ULE6 856 aa19.91■□□□□ 0.78
BRD9-201ENST00000466684 SURF6O75683 361 aaKnown RBP19.9■□□□□ 0.78
BRD9-201ENST00000466684 HERVK_113P62684 666 aa19.9■□□□□ 0.78
BRD9-201ENST00000466684 ATP8B2P98198 1209 aa19.9■□□□□ 0.78
BRD9-201ENST00000466684 GTF3C2Q8WUA4 911 aaPredicted RBP19.9■□□□□ 0.78
BRD9-201ENST00000466684 NUDT12Q9BQG2 462 aa19.9■□□□□ 0.78
BRD9-201ENST00000466684 ZBTB21Q9ULJ3 1066 aa19.9■□□□□ 0.78
BRD9-201ENST00000466684 CDK5RAP2Q96SN8 1893 aa19.9■□□□□ 0.78
BRD9-201ENST00000466684 GDF11O95390 407 aa19.89■□□□□ 0.77
BRD9-201ENST00000466684 XRCC5P13010 732 aaKnown RBP19.89■□□□□ 0.77
BRD9-201ENST00000466684 CYP2B6P20813 491 aa19.89■□□□□ 0.77
BRD9-201ENST00000466684 MAPK4P31152 587 aa19.89■□□□□ 0.77
BRD9-201ENST00000466684 JAG1P78504 1218 aa19.89■□□□□ 0.77
BRD9-201ENST00000466684 TRIM32Q13049 653 aa19.89■□□□□ 0.77
BRD9-201ENST00000466684 PDE3AQ14432 1141 aa19.89■□□□□ 0.77
BRD9-201ENST00000466684 CERS3Q8IU89 383 aa19.89■□□□□ 0.77
BRD9-201ENST00000466684 CCAR1Q8IX12 1150 aaKnown RBP19.89■□□□□ 0.77
BRD9-201ENST00000466684 TRMT44Q8IYL2 757 aaKnown RBP19.89■□□□□ 0.77
BRD9-201ENST00000466684 TRIB2Q92519 343 aa19.89■□□□□ 0.77
BRD9-201ENST00000466684 STAP2Q9UGK3 403 aa19.89■□□□□ 0.77
BRD9-201ENST00000466684 PLXNB2O15031 1838 aa19.88■□□□□ 0.77
BRD9-201ENST00000466684 ZAP70P43403 619 aa19.88■□□□□ 0.77
BRD9-201ENST00000466684 ALPK3Q96L96 1907 aa19.88■□□□□ 0.77
BRD9-201ENST00000466684 MAP3K21Q5TCX8 1036 aa19.87■□□□□ 0.77
BRD9-201ENST00000466684 C7orf61Q8IZ16 206 aa19.87■□□□□ 0.77
BRD9-201ENST00000466684 C11orf49Q9H6J7 331 aa19.87■□□□□ 0.77
BRD9-201ENST00000466684 TXNRD2Q9NNW7 524 aa19.87■□□□□ 0.77
BRD9-201ENST00000466684 RBPJLQ9UBG7 517 aa19.87■□□□□ 0.77
BRD9-201ENST00000466684 SAP30BPQ9UHR5 308 aaKnown RBP19.87■□□□□ 0.77
BRD9-201ENST00000466684 OGDHLQ9ULD0 1010 aa19.87■□□□□ 0.77
BRD9-201ENST00000466684 RANBP2P49792 3224 aaKnown RBP19.87■□□□□ 0.77
BRD9-201ENST00000466684 PRKAR2AP13861 404 aaKnown RBP19.86■□□□□ 0.77
BRD9-201ENST00000466684 CYP7A1P22680 504 aa19.86■□□□□ 0.77
BRD9-201ENST00000466684 BMP8BP34820 402 aa19.86■□□□□ 0.77
BRD9-201ENST00000466684 USP17L2Q6R6M4 530 aa19.86■□□□□ 0.77
BRD9-201ENST00000466684 PIH1D3Q9NQM4 214 aaKnown RBP19.86■□□□□ 0.77
BRD9-201ENST00000466684 DBNLQ9UJU6 430 aaKnown RBP19.86■□□□□ 0.77
BRD9-201ENST00000466684 NOP58Q9Y2X3 529 aaKnown RBP19.86■□□□□ 0.77
BRD9-201ENST00000466684 ZKSCAN1P17029 563 aaPredicted RBP19.85■□□□□ 0.77
BRD9-201ENST00000466684 ERVK-9P63128 1117 aa19.85■□□□□ 0.77
BRD9-201ENST00000466684 ERVK-24P63145 666 aa19.85■□□□□ 0.77
BRD9-201ENST00000466684 DYNLL1P63167 89 aaKnown RBP19.85■□□□□ 0.77
BRD9-201ENST00000466684 SHROOM1Q2M3G4 852 aaPredicted RBP19.85■□□□□ 0.77
BRD9-201ENST00000466684 FTSJ3Q8IY81 847 aaKnown RBP19.85■□□□□ 0.77
BRD9-201ENST00000466684 GDF15Q99988 308 aa19.85■□□□□ 0.77
BRD9-201ENST00000466684 EMILIN3Q9NT22 766 aa19.85■□□□□ 0.77
BRD9-201ENST00000466684 DDX60LQ5H9U9 1706 aaKnown RBP19.85■□□□□ 0.77
BRD9-201ENST00000466684 MYO5AQ9Y4I1 1855 aaKnown RBP19.85■□□□□ 0.77
BRD9-201ENST00000466684 PEX10O60683 326 aa19.85■□□□□ 0.77
BRD9-201ENST00000466684 IDH1O75874 414 aaKnown RBP19.85■□□□□ 0.77
BRD9-201ENST00000466684 RGS2P41220 211 aa19.85■□□□□ 0.77
BRD9-201ENST00000466684 USP5P45974 858 aa19.85■□□□□ 0.77
BRD9-201ENST00000466684 MNX1P50219 401 aaPredicted RBP19.85■□□□□ 0.77
BRD9-201ENST00000466684 PAGR1Q9BTK6 254 aa19.85■□□□□ 0.77
BRD9-201ENST00000466684 GH2P01242 217 aa19.84■□□□□ 0.77
BRD9-201ENST00000466684 Q3C1V9 767 aa19.84■□□□□ 0.77
BRD9-201ENST00000466684 TMED8Q6PL24 325 aaPredicted RBP19.84■□□□□ 0.77
BRD9-201ENST00000466684 GPR142Q7Z601 462 aa19.84■□□□□ 0.77
BRD9-201ENST00000466684 PLEKHH3Q7Z736 793 aa19.84■□□□□ 0.77
BRD9-201ENST00000466684 FEZ1Q99689 392 aa19.84■□□□□ 0.77
BRD9-201ENST00000466684 CCDC8Q9H0W5 538 aaPredicted RBP19.84■□□□□ 0.77
BRD9-201ENST00000466684 C1orf115Q9H7X2 142 aa19.84■□□□□ 0.77
BRD9-201ENST00000466684 CWC22Q9HCG8 908 aaKnown RBP19.84■□□□□ 0.77
BRD9-201ENST00000466684 ZMYND8Q9ULU4 1186 aaPredicted RBP19.84■□□□□ 0.77
BRD9-201ENST00000466684 SZT2Q5T011 3432 aa19.83■□□□□ 0.76
BRD9-201ENST00000466684 SOX1O00570 391 aaPredicted RBP19.83■□□□□ 0.76
BRD9-201ENST00000466684 TATDN1Q6P1N9 297 aa19.83■□□□□ 0.76
BRD9-201ENST00000466684 ITPRIPQ8IWB1 547 aa19.83■□□□□ 0.76
BRD9-201ENST00000466684 MIGA1Q8NAN2 632 aa19.83■□□□□ 0.76
BRD9-201ENST00000466684 USP6NLQ92738 828 aa19.83■□□□□ 0.76
BRD9-201ENST00000466684 C12orf42Q96LP6 360 aa19.83■□□□□ 0.76
BRD9-201ENST00000466684 EHD4Q9H223 541 aa19.83■□□□□ 0.76
BRD9-201ENST00000466684 PORCNQ9H237 461 aa19.83■□□□□ 0.76
BRD9-201ENST00000466684 TLR7Q9NYK1 1049 aaKnown RBP19.83■□□□□ 0.76
BRD9-201ENST00000466684 SERPINB13Q9UIV8 391 aa19.83■□□□□ 0.76
BRD9-201ENST00000466684 MYH1P12882 1939 aa19.82■□□□□ 0.76
BRD9-201ENST00000466684 USP17L15C9J2P7 530 aa19.82■□□□□ 0.76
BRD9-201ENST00000466684 USP17L13C9JLJ4 530 aa19.82■□□□□ 0.76
BRD9-201ENST00000466684 USP17L11C9JVI0 530 aa19.82■□□□□ 0.76
BRD9-201ENST00000466684 USP17L18D6R9N7 530 aa19.82■□□□□ 0.76
BRD9-201ENST00000466684 USP17L22D6RA61 530 aa19.82■□□□□ 0.76
BRD9-201ENST00000466684 USP17L17D6RBQ6 530 aa19.82■□□□□ 0.76
BRD9-201ENST00000466684 USP17L19D6RCP7 530 aa19.82■□□□□ 0.76
BRD9-201ENST00000466684 USP17L20D6RJB6 530 aa19.82■□□□□ 0.76
BRD9-201ENST00000466684 GLRX3O76003 335 aaKnown RBP19.82■□□□□ 0.76
BRD9-201ENST00000466684 USP14P54578 494 aa19.82■□□□□ 0.76
BRD9-201ENST00000466684 CCNA1P78396 465 aa19.82■□□□□ 0.76
BRD9-201ENST00000466684 CACNB2Q08289 660 aaPredicted RBP19.82■□□□□ 0.76
BRD9-201ENST00000466684 USP17L24Q0WX57 530 aa19.82■□□□□ 0.76
BRD9-201ENST00000466684 MAP3K12Q12852 859 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms