RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 USP17L21D6R901 530 aa11.78□□□□□ -0.52
PMF1-204ENST00000466489 PRKAB2O43741 272 aa11.78□□□□□ -0.52
PMF1-204ENST00000466489 CTNND1O60716 968 aaKnown RBP11.78□□□□□ -0.52
PMF1-204ENST00000466489 USP2O75604 605 aaPredicted RBP11.78□□□□□ -0.52
PMF1-204ENST00000466489 NOGQ13253 232 aa11.78□□□□□ -0.52
PMF1-204ENST00000466489 SLC4A8Q2Y0W8 1093 aa11.78□□□□□ -0.52
PMF1-204ENST00000466489 SH3BP5LQ7L8J4 393 aa11.78□□□□□ -0.52
PMF1-204ENST00000466489 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.78□□□□□ -0.52
PMF1-204ENST00000466489 GINM1Q9NU53 330 aa11.78□□□□□ -0.52
PMF1-204ENST00000466489 SIPA1L1O43166 1804 aa11.78□□□□□ -0.52
PMF1-204ENST00000466489 GSG1L2A8MUP6 293 aa11.77□□□□□ -0.53
PMF1-204ENST00000466489 MINDY4BA8MYZ0 360 aa11.77□□□□□ -0.53
PMF1-204ENST00000466489 ESPNB1AK53 854 aa11.77□□□□□ -0.53
PMF1-204ENST00000466489 BAG4O95429 457 aaKnown RBP11.77□□□□□ -0.53
PMF1-204ENST00000466489 ZBTB48P10074 688 aaPredicted RBP11.77□□□□□ -0.53
PMF1-204ENST00000466489 CHMLP26374 656 aa11.77□□□□□ -0.53
PMF1-204ENST00000466489 MAP3K10Q02779 954 aa11.77□□□□□ -0.53
PMF1-204ENST00000466489 PDE4BQ07343 736 aa11.77□□□□□ -0.53
PMF1-204ENST00000466489 VGLL4Q14135 290 aa11.77□□□□□ -0.53
PMF1-204ENST00000466489 SBK1Q52WX2 424 aa11.77□□□□□ -0.53
PMF1-204ENST00000466489 LDLRAD1Q5T700 205 aa11.77□□□□□ -0.53
PMF1-204ENST00000466489 CCDC129Q6ZRS4 1044 aa11.77□□□□□ -0.53
PMF1-204ENST00000466489 MOB2Q70IA6 237 aa11.77□□□□□ -0.53
PMF1-204ENST00000466489 REM2Q8IYK8 340 aaPredicted RBP11.77□□□□□ -0.53
PMF1-204ENST00000466489 IFNL3Q8IZI9 196 aa11.77□□□□□ -0.53
PMF1-204ENST00000466489 CAPNS2Q96L46 248 aa11.77□□□□□ -0.53
PMF1-204ENST00000466489 PPP1R9BQ96SB3 815 aa11.77□□□□□ -0.53
PMF1-204ENST00000466489 KIF2CQ99661 725 aa11.77□□□□□ -0.53
PMF1-204ENST00000466489 CABP5Q9NP86 173 aa11.77□□□□□ -0.53
PMF1-204ENST00000466489 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.77□□□□□ -0.53
PMF1-204ENST00000466489 CTNNA3Q9UI47 895 aa11.77□□□□□ -0.53
PMF1-204ENST00000466489 ZNF112Q9UJU3 913 aa11.77□□□□□ -0.53
PMF1-204ENST00000466489 ZMYM6O95789 1325 aa11.77□□□□□ -0.53
PMF1-204ENST00000466489 CEP350Q5VT06 3117 aa11.76□□□□□ -0.53
PMF1-204ENST00000466489 TPM2P07951 284 aa11.76□□□□□ -0.53
PMF1-204ENST00000466489 ASNSP08243 561 aa11.76□□□□□ -0.53
PMF1-204ENST00000466489 NASPP49321 788 aaPredicted RBP11.76□□□□□ -0.53
PMF1-204ENST00000466489 NOL9Q5SY16 702 aaKnown RBP11.76□□□□□ -0.53
PMF1-204ENST00000466489 C12orf60Q5U649 245 aa11.76□□□□□ -0.53
PMF1-204ENST00000466489 MTERF4Q7Z6M4 381 aaKnown RBP11.76□□□□□ -0.53
PMF1-204ENST00000466489 METTL16Q86W50 562 aaKnown RBP11.76□□□□□ -0.53
PMF1-204ENST00000466489 ERO1BQ86YB8 467 aa11.76□□□□□ -0.53
PMF1-204ENST00000466489 SCYL3Q8IZE3 742 aa11.76□□□□□ -0.53
PMF1-204ENST00000466489 ELP3Q9H9T3 547 aa11.76□□□□□ -0.53
PMF1-204ENST00000466489 FZD1Q9UP38 647 aa11.76□□□□□ -0.53
PMF1-204ENST00000466489 LAMA4Q16363 1823 aa11.76□□□□□ -0.53
PMF1-204ENST00000466489 SLC10A3P09131 477 aa11.75□□□□□ -0.53
PMF1-204ENST00000466489 HSPD1P10809 573 aaKnown RBP11.75□□□□□ -0.53
PMF1-204ENST00000466489 MSNP26038 577 aaKnown RBP11.75□□□□□ -0.53
PMF1-204ENST00000466489 MAP2K2P36507 400 aa11.75□□□□□ -0.53
PMF1-204ENST00000466489 CAP2P40123 477 aa11.75□□□□□ -0.53
PMF1-204ENST00000466489 PLCD1P51178 756 aa11.75□□□□□ -0.53
PMF1-204ENST00000466489 HTRA3P83110 453 aa11.75□□□□□ -0.53
PMF1-204ENST00000466489 SREBF2Q12772 1141 aa11.75□□□□□ -0.53
PMF1-204ENST00000466489 ALX1Q15699 326 aa11.75□□□□□ -0.53
PMF1-204ENST00000466489 CERKLQ49MI3 558 aaPredicted RBP11.75□□□□□ -0.53
PMF1-204ENST00000466489 CYP4F22Q6NT55 531 aa11.75□□□□□ -0.53
PMF1-204ENST00000466489 CTR9Q6PD62 1173 aa11.75□□□□□ -0.53
PMF1-204ENST00000466489 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.75□□□□□ -0.53
PMF1-204ENST00000466489 RASAL3Q86YV0 1011 aa11.75□□□□□ -0.53
PMF1-204ENST00000466489 ZKSCAN4Q969J2 545 aaPredicted RBP11.75□□□□□ -0.53
PMF1-204ENST00000466489 CCDC17Q96LX7 622 aa11.75□□□□□ -0.53
PMF1-204ENST00000466489 BEGAINQ9BUH8 593 aa11.75□□□□□ -0.53
PMF1-204ENST00000466489 DSCC1Q9BVC3 393 aa11.75□□□□□ -0.53
PMF1-204ENST00000466489 MKNK2Q9HBH9 465 aa11.75□□□□□ -0.53
PMF1-204ENST00000466489 AS3MTQ9HBK9 375 aa11.75□□□□□ -0.53
PMF1-204ENST00000466489 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.75□□□□□ -0.53
PMF1-204ENST00000466489 WDR33Q9C0J8 1336 aaKnown RBP11.75□□□□□ -0.53
PMF1-204ENST00000466489 MANSC4A6NHS7 340 aaPredicted RBP11.74□□□□□ -0.53
PMF1-204ENST00000466489 SPDYE5A6NIY4 337 aa11.74□□□□□ -0.53
PMF1-204ENST00000466489 FAM196BA6NMK8 535 aa11.74□□□□□ -0.53
PMF1-204ENST00000466489 MPHOSPH10O00566 681 aaKnown RBP11.74□□□□□ -0.53
PMF1-204ENST00000466489 SGSM2O43147 1006 aa11.74□□□□□ -0.53
PMF1-204ENST00000466489 PCP11498 1178 aaKnown RBP11.74□□□□□ -0.53
PMF1-204ENST00000466489 INPP5BP32019 993 aa11.74□□□□□ -0.53
PMF1-204ENST00000466489 PPATQ06203 517 aa11.74□□□□□ -0.53
PMF1-204ENST00000466489 PPARAQ07869 468 aa11.74□□□□□ -0.53
PMF1-204ENST00000466489 PPIL2Q13356 520 aa11.74□□□□□ -0.53
PMF1-204ENST00000466489 IMMTQ16891 758 aaKnown RBP11.74□□□□□ -0.53
PMF1-204ENST00000466489 ABCB5Q2M3G0 1257 aa11.74□□□□□ -0.53
PMF1-204ENST00000466489 C16orf86Q6ZW13 317 aa11.74□□□□□ -0.53
PMF1-204ENST00000466489 ZNF589Q86UQ0 364 aaPredicted RBP11.74□□□□□ -0.53
PMF1-204ENST00000466489 OPTNQ96CV9 577 aa11.74□□□□□ -0.53
PMF1-204ENST00000466489 OTUD5Q96G74 571 aa11.74□□□□□ -0.53
PMF1-204ENST00000466489 WNK4Q96J92 1243 aa11.74□□□□□ -0.53
PMF1-204ENST00000466489 CLMNQ96JQ2 1002 aa11.74□□□□□ -0.53
PMF1-204ENST00000466489 MAP7D2Q96T17 732 aa11.74□□□□□ -0.53
PMF1-204ENST00000466489 RNF41Q9H4P4 317 aaPredicted RBP11.74□□□□□ -0.53
PMF1-204ENST00000466489 EPB41L4AQ9HCS5 686 aaPredicted RBP11.74□□□□□ -0.53
PMF1-204ENST00000466489 ROBO3Q96MS0 1386 aa11.74□□□□□ -0.53
PMF1-204ENST00000466489 PHF20L1A8MW92 1017 aa11.73□□□□□ -0.53
PMF1-204ENST00000466489 ZNF213O14771 459 aa11.73□□□□□ -0.53
PMF1-204ENST00000466489 TPM3P06753 285 aa11.73□□□□□ -0.53
PMF1-204ENST00000466489 CYP2D6P10635 497 aa11.73□□□□□ -0.53
PMF1-204ENST00000466489 CDK8P49336 464 aa11.73□□□□□ -0.53
PMF1-204ENST00000466489 VEGFBP49765 207 aa11.73□□□□□ -0.53
PMF1-204ENST00000466489 NT5C2P49902 561 aa11.73□□□□□ -0.53
PMF1-204ENST00000466489 GTF2A2P52657 109 aa11.73□□□□□ -0.53
PMF1-204ENST00000466489 INHBEP58166 350 aa11.73□□□□□ -0.53
PMF1-204ENST00000466489 GABPAQ06546 454 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms