RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 C19orf81C9J6K1 198 aa17.96■□□□□ 0.47
MCF2L-220ENST00000464800 XRCC5P13010 732 aaKnown RBP17.96■□□□□ 0.47
MCF2L-220ENST00000464800 ZKSCAN1P17029 563 aaPredicted RBP17.96■□□□□ 0.47
MCF2L-220ENST00000464800 MAPK4P31152 587 aa17.96■□□□□ 0.47
MCF2L-220ENST00000464800 HERVK_113P62684 666 aa17.96■□□□□ 0.47
MCF2L-220ENST00000464800 NAA16Q6N069 864 aaPredicted RBP17.96■□□□□ 0.47
MCF2L-220ENST00000464800 TDHQ8IZJ6 230 aa17.96■□□□□ 0.47
MCF2L-220ENST00000464800 CRACR2BQ8N4Y2 399 aaPredicted RBP17.96■□□□□ 0.47
MCF2L-220ENST00000464800 DEFB123Q8N688 67 aa17.96■□□□□ 0.47
MCF2L-220ENST00000464800 P2RX7Q99572 595 aaKnown RBP17.96■□□□□ 0.47
MCF2L-220ENST00000464800 TXNRD2Q9NNW7 524 aa17.96■□□□□ 0.47
MCF2L-220ENST00000464800 PFASO15067 1338 aa17.96■□□□□ 0.46
MCF2L-220ENST00000464800 FLT1P17948 1338 aa17.96■□□□□ 0.46
MCF2L-220ENST00000464800 COL6A3P12111 3177 aa17.95■□□□□ 0.46
MCF2L-220ENST00000464800 PEX10O60683 326 aa17.95■□□□□ 0.46
MCF2L-220ENST00000464800 RARSP54136 660 aaKnown RBP17.95■□□□□ 0.46
MCF2L-220ENST00000464800 G3BP1Q13283 466 aaKnown RBP eCLIP17.95■□□□□ 0.46
MCF2L-220ENST00000464800 LRIT3Q3SXY7 679 aa17.95■□□□□ 0.46
MCF2L-220ENST00000464800 CCAR1Q8IX12 1150 aaKnown RBP17.95■□□□□ 0.46
MCF2L-220ENST00000464800 TGFBRAP1Q8WUH2 860 aa17.95■□□□□ 0.46
MCF2L-220ENST00000464800 DNAJC18Q9H819 358 aa17.95■□□□□ 0.46
MCF2L-220ENST00000464800 GINM1Q9NU53 330 aa17.95■□□□□ 0.46
MCF2L-220ENST00000464800 MYH1P12882 1939 aa17.95■□□□□ 0.46
MCF2L-220ENST00000464800 USP17L10C9JJH3 530 aa17.94■□□□□ 0.46
MCF2L-220ENST00000464800 GDF11O95390 407 aa17.94■□□□□ 0.46
MCF2L-220ENST00000464800 MAPKAPK5Q8IW41 473 aa17.94■□□□□ 0.46
MCF2L-220ENST00000464800 GTF3C2Q8WUA4 911 aaPredicted RBP17.94■□□□□ 0.46
MCF2L-220ENST00000464800 UBE2OQ9C0C9 1292 aaKnown RBP17.94■□□□□ 0.46
MCF2L-220ENST00000464800 ZBTB21Q9ULJ3 1066 aa17.94■□□□□ 0.46
MCF2L-220ENST00000464800 GNAI2P04899 355 aa17.93■□□□□ 0.46
MCF2L-220ENST00000464800 RGS2P41220 211 aa17.93■□□□□ 0.46
MCF2L-220ENST00000464800 ERVK-9P63128 1117 aa17.93■□□□□ 0.46
MCF2L-220ENST00000464800 ERVK-24P63145 666 aa17.93■□□□□ 0.46
MCF2L-220ENST00000464800 JAG1P78504 1218 aa17.93■□□□□ 0.46
MCF2L-220ENST00000464800 CACNB2Q08289 660 aaPredicted RBP17.93■□□□□ 0.46
MCF2L-220ENST00000464800 TTC39AQ5SRH9 613 aa17.93■□□□□ 0.46
MCF2L-220ENST00000464800 Q7L0L9 218 aa17.93■□□□□ 0.46
MCF2L-220ENST00000464800 METTL16Q86W50 562 aaKnown RBP17.93■□□□□ 0.46
MCF2L-220ENST00000464800 FOXP4Q8IVH2 680 aaPredicted RBP17.93■□□□□ 0.46
MCF2L-220ENST00000464800 APBA2Q99767 749 aa17.93■□□□□ 0.46
MCF2L-220ENST00000464800 PAGR1Q9BTK6 254 aa17.93■□□□□ 0.46
MCF2L-220ENST00000464800 SNRKQ9NRH2 765 aa17.93■□□□□ 0.46
MCF2L-220ENST00000464800 RBPJLQ9UBG7 517 aa17.93■□□□□ 0.46
MCF2L-220ENST00000464800 PNMA6EA0A0J9YXQ4 647 aa17.92■□□□□ 0.46
MCF2L-220ENST00000464800 COL6A1P12109 1028 aa17.92■□□□□ 0.46
MCF2L-220ENST00000464800 PPP4CP60510 307 aa17.92■□□□□ 0.46
MCF2L-220ENST00000464800 SHROOM1Q2M3G4 852 aaPredicted RBP17.92■□□□□ 0.46
MCF2L-220ENST00000464800 GPR142Q7Z601 462 aa17.92■□□□□ 0.46
MCF2L-220ENST00000464800 USP6NLQ92738 828 aa17.92■□□□□ 0.46
MCF2L-220ENST00000464800 PORCNQ9H237 461 aa17.92■□□□□ 0.46
MCF2L-220ENST00000464800 CWC22Q9HCG8 908 aaKnown RBP17.92■□□□□ 0.46
MCF2L-220ENST00000464800 PALD1Q9ULE6 856 aa17.92■□□□□ 0.46
MCF2L-220ENST00000464800 HLA-DOAP06340 250 aa17.91■□□□□ 0.46
MCF2L-220ENST00000464800 CCND3P30281 292 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-220ENST00000464800 CCL14Q16627 93 aa17.91■□□□□ 0.46
MCF2L-220ENST00000464800 CCDC158Q5M9N0 1113 aa17.91■□□□□ 0.46
MCF2L-220ENST00000464800 MORN1Q5T089 497 aa17.91■□□□□ 0.46
MCF2L-220ENST00000464800 ATF7IPQ6VMQ6 1270 aa17.91■□□□□ 0.46
MCF2L-220ENST00000464800 PLEKHH3Q7Z736 793 aa17.91■□□□□ 0.46
MCF2L-220ENST00000464800 ADGRA1Q86SQ6 560 aa17.91■□□□□ 0.46
MCF2L-220ENST00000464800 STXBP5LQ9Y2K9 1186 aa17.91■□□□□ 0.46
MCF2L-220ENST00000464800 IPO8O15397 1037 aaKnown RBP17.9■□□□□ 0.46
MCF2L-220ENST00000464800 TRIM27P14373 513 aa17.9■□□□□ 0.46
MCF2L-220ENST00000464800 Q3C1V9 767 aa17.9■□□□□ 0.46
MCF2L-220ENST00000464800 USP17L2Q6R6M4 530 aa17.9■□□□□ 0.46
MCF2L-220ENST00000464800 EMILIN3Q9NT22 766 aa17.9■□□□□ 0.46
MCF2L-220ENST00000464800 SAP30BPQ9UHR5 308 aaKnown RBP17.9■□□□□ 0.46
MCF2L-220ENST00000464800 CYP2E1P05181 493 aaPredicted RBP17.89■□□□□ 0.45
MCF2L-220ENST00000464800 LRRC26Q2I0M4 334 aa17.89■□□□□ 0.45
MCF2L-220ENST00000464800 TNNI3KQ59H18 835 aa17.89■□□□□ 0.45
MCF2L-220ENST00000464800 LHX8Q68G74 356 aa17.89■□□□□ 0.45
MCF2L-220ENST00000464800 FEZ1Q99689 392 aa17.89■□□□□ 0.45
MCF2L-220ENST00000464800 DBNDD2Q9BQY9 259 aa17.89■□□□□ 0.45
MCF2L-220ENST00000464800 GPR108Q9NPR9 543 aa17.89■□□□□ 0.45
MCF2L-220ENST00000464800 MTMR10Q9NXD2 777 aa17.89■□□□□ 0.45
MCF2L-220ENST00000464800 FPGT-TNNI3KV9GXZ4 949 aa17.89■□□□□ 0.45
MCF2L-220ENST00000464800 CUL9Q8IWT3 2517 aa17.89■□□□□ 0.45
MCF2L-220ENST00000464800 IGSF3O75054 1194 aa17.88■□□□□ 0.45
MCF2L-220ENST00000464800 GH2P01242 217 aa17.88■□□□□ 0.45
MCF2L-220ENST00000464800 CCNA1P78396 465 aa17.88■□□□□ 0.45
MCF2L-220ENST00000464800 OS9Q13438 667 aaPredicted RBP17.88■□□□□ 0.45
MCF2L-220ENST00000464800 GLRX3O76003 335 aaKnown RBP17.87■□□□□ 0.45
MCF2L-220ENST00000464800 MDM2Q00987 491 aaPredicted RBP17.87■□□□□ 0.45
MCF2L-220ENST00000464800 MAP2K5Q13163 448 aa17.87■□□□□ 0.45
MCF2L-220ENST00000464800 ZYXQ15942 572 aaKnown RBP17.87■□□□□ 0.45
MCF2L-220ENST00000464800 POTEEQ6S8J3 1075 aa17.87■□□□□ 0.45
MCF2L-220ENST00000464800 FRAT1Q92837 279 aaPredicted RBP17.87■□□□□ 0.45
MCF2L-220ENST00000464800 C12orf42Q96LP6 360 aa17.87■□□□□ 0.45
MCF2L-220ENST00000464800 RABGAP1Q9Y3P9 1069 aa17.87■□□□□ 0.45
MCF2L-220ENST00000464800 USP17L15C9J2P7 530 aa17.86■□□□□ 0.45
MCF2L-220ENST00000464800 USP17L13C9JLJ4 530 aa17.86■□□□□ 0.45
MCF2L-220ENST00000464800 USP17L11C9JVI0 530 aa17.86■□□□□ 0.45
MCF2L-220ENST00000464800 USP17L18D6R9N7 530 aa17.86■□□□□ 0.45
MCF2L-220ENST00000464800 USP17L22D6RA61 530 aa17.86■□□□□ 0.45
MCF2L-220ENST00000464800 USP17L17D6RBQ6 530 aa17.86■□□□□ 0.45
MCF2L-220ENST00000464800 USP17L19D6RCP7 530 aa17.86■□□□□ 0.45
MCF2L-220ENST00000464800 USP17L20D6RJB6 530 aa17.86■□□□□ 0.45
MCF2L-220ENST00000464800 ZAP70P43403 619 aa17.86■□□□□ 0.45
MCF2L-220ENST00000464800 DYNLL1P63167 89 aaKnown RBP17.86■□□□□ 0.45
MCF2L-220ENST00000464800 USP17L24Q0WX57 530 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms