RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 ABHD4Q8TB40 342 aa7.23□□□□□ -1.25
USH2A-203ENST00000463147 CD320Q9NPF0 282 aa7.23□□□□□ -1.25
USH2A-203ENST00000463147 C19orf73Q9NVV2 129 aa7.23□□□□□ -1.25
USH2A-203ENST00000463147 PPM1HQ9ULR3 514 aa7.23□□□□□ -1.25
USH2A-203ENST00000463147 CSADQ9Y600 493 aa7.23□□□□□ -1.25
USH2A-203ENST00000463147 SRFP11831 508 aa7.22□□□□□ -1.25
USH2A-203ENST00000463147 CYP7A1P22680 504 aa7.22□□□□□ -1.25
USH2A-203ENST00000463147 GSTT1P30711 240 aa7.22□□□□□ -1.25
USH2A-203ENST00000463147 CAP2P40123 477 aa7.22□□□□□ -1.25
USH2A-203ENST00000463147 CDKAL1Q5VV42 579 aa7.22□□□□□ -1.25
USH2A-203ENST00000463147 LLGL2Q6P1M3 1020 aa7.22□□□□□ -1.25
USH2A-203ENST00000463147 PCDHA4Q9UN74 947 aa7.22□□□□□ -1.25
USH2A-203ENST00000463147 CYP8B1Q9UNU6 501 aa7.22□□□□□ -1.25
USH2A-203ENST00000463147 BMP6P22004 513 aa7.21□□□□□ -1.26
USH2A-203ENST00000463147 KIR3DL1P43629 444 aa7.21□□□□□ -1.26
USH2A-203ENST00000463147 ATG14Q6ZNE5 492 aa7.21□□□□□ -1.26
USH2A-203ENST00000463147 H3BS24 57 aa7.2□□□□□ -1.26
USH2A-203ENST00000463147 CTSWP56202 376 aa7.2□□□□□ -1.26
USH2A-203ENST00000463147 NXPE4Q6UWF7 544 aa7.2□□□□□ -1.26
USH2A-203ENST00000463147 TMPRSS7Q7RTY8 843 aa7.2□□□□□ -1.26
USH2A-203ENST00000463147 ANKRD24Q8TF21 1146 aa7.2□□□□□ -1.26
USH2A-203ENST00000463147 CAPN6Q9Y6Q1 641 aa7.2□□□□□ -1.26
USH2A-203ENST00000463147 CARNS1A5YM72 827 aa7.19□□□□□ -1.26
USH2A-203ENST00000463147 SLITRK5O94991 958 aa7.19□□□□□ -1.26
USH2A-203ENST00000463147 INHBBP09529 407 aa7.19□□□□□ -1.26
USH2A-203ENST00000463147 TTC6Q86TZ1 520 aa7.19□□□□□ -1.26
USH2A-203ENST00000463147 KCNN1Q92952 543 aa7.19□□□□□ -1.26
USH2A-203ENST00000463147 ST14Q9Y5Y6 855 aa7.19□□□□□ -1.26
USH2A-203ENST00000463147 GIPC1O14908 333 aa7.18□□□□□ -1.26
USH2A-203ENST00000463147 FGD1P98174 961 aa7.18□□□□□ -1.26
USH2A-203ENST00000463147 PDE4CQ08493 712 aa7.18□□□□□ -1.26
USH2A-203ENST00000463147 HDXQ7Z353 690 aa7.18□□□□□ -1.26
USH2A-203ENST00000463147 UBE3DQ7Z6J8 389 aa7.18□□□□□ -1.26
USH2A-203ENST00000463147 C3orf58Q8NDZ4 430 aa7.18□□□□□ -1.26
USH2A-203ENST00000463147 RGS22Q8NE09 1264 aa7.18□□□□□ -1.26
USH2A-203ENST00000463147 MYLIPQ8WY64 445 aa7.18□□□□□ -1.26
USH2A-203ENST00000463147 MIPEPQ99797 713 aa7.18□□□□□ -1.26
USH2A-203ENST00000463147 SMG5Q9UPR3 1016 aaKnown RBP7.18□□□□□ -1.26
USH2A-203ENST00000463147 ENC1O14682 589 aa7.17□□□□□ -1.26
USH2A-203ENST00000463147 NUAK1O60285 661 aa7.17□□□□□ -1.26
USH2A-203ENST00000463147 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.17□□□□□ -1.26
USH2A-203ENST00000463147 PI16Q6UXB8 463 aa7.17□□□□□ -1.26
USH2A-203ENST00000463147 TPTE2Q6XPS3 522 aa7.17□□□□□ -1.26
USH2A-203ENST00000463147 PIWIL2Q8TC59 973 aaKnown RBP7.17□□□□□ -1.26
USH2A-203ENST00000463147 GRIN3AQ8TCU5 1115 aa7.17□□□□□ -1.26
USH2A-203ENST00000463147 FBF1Q8TES7 1133 aa7.17□□□□□ -1.26
USH2A-203ENST00000463147 UBE2FQ969M7 185 aa7.17□□□□□ -1.26
USH2A-203ENST00000463147 GZF1Q9H116 711 aaPredicted RBP7.17□□□□□ -1.26
USH2A-203ENST00000463147 SLAMF8Q9P0V8 285 aa7.17□□□□□ -1.26
USH2A-203ENST00000463147 TMEM59LQ9UK28 342 aa7.17□□□□□ -1.26
USH2A-203ENST00000463147 PRR33A8MZF0 331 aa7.16□□□□□ -1.26
USH2A-203ENST00000463147 ETV2O00321 342 aaPredicted RBP7.16□□□□□ -1.26
USH2A-203ENST00000463147 BUD31P41223 144 aaPredicted RBP7.16□□□□□ -1.26
USH2A-203ENST00000463147 MPRIPQ6WCQ1 1025 aa7.16□□□□□ -1.26
USH2A-203ENST00000463147 TXNDC2Q86VQ3 553 aa7.16□□□□□ -1.26
USH2A-203ENST00000463147 HID1Q8IV36 788 aa7.16□□□□□ -1.26
USH2A-203ENST00000463147 WNT10AQ9GZT5 417 aa7.16□□□□□ -1.26
USH2A-203ENST00000463147 SNCAIPQ9Y6H5 919 aa7.16□□□□□ -1.26
USH2A-203ENST00000463147 LINC00310P59036 64 aa7.15□□□□□ -1.26
USH2A-203ENST00000463147 PLCB3Q01970 1234 aa7.15□□□□□ -1.26
USH2A-203ENST00000463147 SLBPQ14493 270 aaKnown RBP eCLIP7.15□□□□□ -1.26
USH2A-203ENST00000463147 LETMD1Q6P1Q0 360 aa7.15□□□□□ -1.26
USH2A-203ENST00000463147 ZSWIM5Q9P217 1185 aa7.15□□□□□ -1.26
USH2A-203ENST00000463147 PNMA6FA0A0J9YX94 578 aa7.14□□□□□ -1.27
USH2A-203ENST00000463147 PRAMEF27A3QJZ7 478 aa7.14□□□□□ -1.27
USH2A-203ENST00000463147 HPXP02790 462 aa7.14□□□□□ -1.27
USH2A-203ENST00000463147 ETF1P62495 437 aaKnown RBP7.14□□□□□ -1.27
USH2A-203ENST00000463147 ENOX2Q16206 610 aaKnown RBP7.14□□□□□ -1.27
USH2A-203ENST00000463147 CBX7O95931 251 aa7.13□□□□□ -1.27
USH2A-203ENST00000463147 TMC7Q7Z402 723 aa7.13□□□□□ -1.27
USH2A-203ENST00000463147 IRF2BP1Q8IU81 584 aa7.13□□□□□ -1.27
USH2A-203ENST00000463147 LILRA2Q8N149 483 aa7.13□□□□□ -1.27
USH2A-203ENST00000463147 TRIT1Q9H3H1 467 aaKnown RBP7.13□□□□□ -1.27
USH2A-203ENST00000463147 DCTN4Q9UJW0 460 aa7.13□□□□□ -1.27
USH2A-203ENST00000463147 TACC3Q9Y6A5 838 aa7.13□□□□□ -1.27
USH2A-203ENST00000463147 CST3P01034 146 aaPredicted RBP7.12□□□□□ -1.27
USH2A-203ENST00000463147 LRFN4Q6PJG9 635 aa7.12□□□□□ -1.27
USH2A-203ENST00000463147 RELTQ969Z4 430 aa7.12□□□□□ -1.27
USH2A-203ENST00000463147 KRTAP9-3Q9BYQ3 159 aa7.12□□□□□ -1.27
USH2A-203ENST00000463147 SLC6A17Q9H1V8 727 aa7.12□□□□□ -1.27
USH2A-203ENST00000463147 PAGE1O75459 146 aa7.11□□□□□ -1.27
USH2A-203ENST00000463147 HOXA5P20719 270 aa7.11□□□□□ -1.27
USH2A-203ENST00000463147 ETV3P41162 512 aa7.11□□□□□ -1.27
USH2A-203ENST00000463147 MFAP1P55081 439 aaKnown RBP7.11□□□□□ -1.27
USH2A-203ENST00000463147 DSC3Q14574 896 aa7.11□□□□□ -1.27
USH2A-203ENST00000463147 INPP5AQ14642 412 aa7.11□□□□□ -1.27
USH2A-203ENST00000463147 PCNX4Q63HM2 1172 aa7.11□□□□□ -1.27
USH2A-203ENST00000463147 OXR1Q8N573 874 aa7.11□□□□□ -1.27
USH2A-203ENST00000463147 SYTL4Q96C24 671 aaPredicted RBP7.11□□□□□ -1.27
USH2A-203ENST00000463147 FBRSQ9HAH7 460 aa7.11□□□□□ -1.27
USH2A-203ENST00000463147 DNAJC25-GNG10A0A024R161 153 aa7.1□□□□□ -1.27
USH2A-203ENST00000463147 PEX10O60683 326 aa7.1□□□□□ -1.27
USH2A-203ENST00000463147 SEMA7AO75326 666 aa7.1□□□□□ -1.27
USH2A-203ENST00000463147 HK2P52789 917 aa7.1□□□□□ -1.27
USH2A-203ENST00000463147 TNK2Q07912 1038 aa7.1□□□□□ -1.27
USH2A-203ENST00000463147 TMCO4Q5TGY1 634 aa7.1□□□□□ -1.27
USH2A-203ENST00000463147 PDZD8Q8NEN9 1154 aa7.1□□□□□ -1.27
USH2A-203ENST00000463147 DHX38Q92620 1227 aaKnown RBP7.1□□□□□ -1.27
USH2A-203ENST00000463147 PLPPR2Q96GM1 343 aa7.1□□□□□ -1.27
USH2A-203ENST00000463147 PARD6AQ9NPB6 346 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms