RNA–Protein interactions for RNA: ENST00000463093.5

SSBP1-203, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-203ENST00000463093 KCNA4P22459 653 aa16.28■□□□□ 0.2
SSBP1-203ENST00000463093 CERKLQ49MI3 558 aaPredicted RBP16.28■□□□□ 0.2
SSBP1-203ENST00000463093 CWC27Q6UX04 472 aaKnown RBP16.28■□□□□ 0.2
SSBP1-203ENST00000463093 RNF186Q9NXI6 227 aa16.28■□□□□ 0.2
SSBP1-203ENST00000463093 ARPP21Q9UBL0 812 aaPredicted RBP16.28■□□□□ 0.2
SSBP1-203ENST00000463093 USP17L5A8MUK1 530 aa16.27■□□□□ 0.2
SSBP1-203ENST00000463093 MINDY4BA8MYZ0 360 aa16.27■□□□□ 0.2
SSBP1-203ENST00000463093 CHMLP26374 656 aa16.27■□□□□ 0.2
SSBP1-203ENST00000463093 TDO2P48775 406 aa16.27■□□□□ 0.2
SSBP1-203ENST00000463093 CDK8P49336 464 aa16.27■□□□□ 0.2
SSBP1-203ENST00000463093 VPS53Q5VIR6 699 aa16.27■□□□□ 0.2
SSBP1-203ENST00000463093 ZNF589Q86UQ0 364 aaPredicted RBP16.27■□□□□ 0.2
SSBP1-203ENST00000463093 IFNL1Q8IU54 200 aa16.27■□□□□ 0.2
SSBP1-203ENST00000463093 BRI3BPQ8WY22 251 aa16.27■□□□□ 0.2
SSBP1-203ENST00000463093 PTPN18Q99952 460 aa16.27■□□□□ 0.2
SSBP1-203ENST00000463093 FOCADQ5VW36 1801 aa16.26■□□□□ 0.19
SSBP1-203ENST00000463093 CCL15-CCL14A0A0B4J2E2 113 aa16.26■□□□□ 0.19
SSBP1-203ENST00000463093 FOXN1O15353 648 aa16.26■□□□□ 0.19
SSBP1-203ENST00000463093 TRPA1O75762 1119 aa16.26■□□□□ 0.19
SSBP1-203ENST00000463093 GDF11O95390 407 aa16.26■□□□□ 0.19
SSBP1-203ENST00000463093 HSPD1P10809 573 aaKnown RBP16.26■□□□□ 0.19
SSBP1-203ENST00000463093 MFAP1P55081 439 aaKnown RBP16.26■□□□□ 0.19
SSBP1-203ENST00000463093 CCL15Q16663 113 aa16.26■□□□□ 0.19
SSBP1-203ENST00000463093 ABCB5Q2M3G0 1257 aa16.26■□□□□ 0.19
SSBP1-203ENST00000463093 OTUD7BQ6GQQ9 843 aa16.26■□□□□ 0.19
SSBP1-203ENST00000463093 C16orf86Q6ZW13 317 aa16.26■□□□□ 0.19
SSBP1-203ENST00000463093 SLC44A5Q8NCS7 719 aa16.26■□□□□ 0.19
SSBP1-203ENST00000463093 WDR18Q9BV38 432 aa16.26■□□□□ 0.19
SSBP1-203ENST00000463093 TBC1D2Q9BYX2 928 aa16.26■□□□□ 0.19
SSBP1-203ENST00000463093 NAPBQ9H115 298 aa16.26■□□□□ 0.19
SSBP1-203ENST00000463093 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.26■□□□□ 0.19
SSBP1-203ENST00000463093 ZBTB21Q9ULJ3 1066 aa16.26■□□□□ 0.19
SSBP1-203ENST00000463093 CCDC171Q6TFL3 1326 aa16.25■□□□□ 0.19
SSBP1-203ENST00000463093 IGF2BP3O00425 579 aaKnown RBP eCLIP16.25■□□□□ 0.19
SSBP1-203ENST00000463093 ALDH1A1P00352 501 aa16.25■□□□□ 0.19
SSBP1-203ENST00000463093 GH2P01242 217 aa16.25■□□□□ 0.19
SSBP1-203ENST00000463093 FGAP02671 866 aa16.25■□□□□ 0.19
SSBP1-203ENST00000463093 CTCFP49711 727 aaPredicted RBP16.25■□□□□ 0.19
SSBP1-203ENST00000463093 SPP2Q13103 211 aa16.25■□□□□ 0.19
SSBP1-203ENST00000463093 SHROOM1Q2M3G4 852 aaPredicted RBP16.25■□□□□ 0.19
SSBP1-203ENST00000463093 BMP2KLQ5H9B9 411 aa16.25■□□□□ 0.19
SSBP1-203ENST00000463093 CCDC84Q86UT8 332 aaPredicted RBP16.25■□□□□ 0.19
SSBP1-203ENST00000463093 ZNF280CQ8ND82 737 aa16.25■□□□□ 0.19
SSBP1-203ENST00000463093 CCDC17Q96LX7 622 aa16.25■□□□□ 0.19
SSBP1-203ENST00000463093 CABP5Q9NP86 173 aa16.25■□□□□ 0.19
SSBP1-203ENST00000463093 SAGE1Q9NXZ1 904 aa16.25■□□□□ 0.19
SSBP1-203ENST00000463093 MOGSQ13724 837 aa16.24■□□□□ 0.19
SSBP1-203ENST00000463093 RUFY2Q8WXA3 655 aa16.24■□□□□ 0.19
SSBP1-203ENST00000463093 AS3MTQ9HBK9 375 aa16.24■□□□□ 0.19
SSBP1-203ENST00000463093 A0A0G2JLL6 359 aaPredicted RBP16.23■□□□□ 0.19
SSBP1-203ENST00000463093 TRIM75PA6NK02 468 aa16.23■□□□□ 0.19
SSBP1-203ENST00000463093 BTBD19C9JJ37 291 aa16.23■□□□□ 0.19
SSBP1-203ENST00000463093 GUCY1A2P33402 732 aa16.23■□□□□ 0.19
SSBP1-203ENST00000463093 PPARAQ07869 468 aa16.23■□□□□ 0.19
SSBP1-203ENST00000463093 FASTKD5Q7L8L6 764 aaKnown RBP16.23■□□□□ 0.19
SSBP1-203ENST00000463093 PRRT2Q7Z6L0 340 aaPredicted RBP16.23■□□□□ 0.19
SSBP1-203ENST00000463093 SIPA1L1O43166 1804 aa16.23■□□□□ 0.19
SSBP1-203ENST00000463093 BAZ2AQ9UIF9 1905 aaKnown RBP16.23■□□□□ 0.19
SSBP1-203ENST00000463093 OTOFQ9HC10 1997 aa16.22■□□□□ 0.19
SSBP1-203ENST00000463093 C19orf81C9J6K1 198 aa16.22■□□□□ 0.19
SSBP1-203ENST00000463093 SLC3A2P08195 630 aaKnown RBP16.22■□□□□ 0.19
SSBP1-203ENST00000463093 HSPA8P11142 646 aaKnown RBP16.22■□□□□ 0.19
SSBP1-203ENST00000463093 AKR1B1P15121 316 aa16.22■□□□□ 0.19
SSBP1-203ENST00000463093 BACE1P56817 501 aa16.22■□□□□ 0.19
SSBP1-203ENST00000463093 SEPT2Q15019 361 aa16.22■□□□□ 0.19
SSBP1-203ENST00000463093 FAM43AQ8N2R8 423 aa16.22■□□□□ 0.19
SSBP1-203ENST00000463093 CFHR5Q9BXR6 569 aa16.22■□□□□ 0.19
SSBP1-203ENST00000463093 MKNK2Q9HBH9 465 aa16.22■□□□□ 0.19
SSBP1-203ENST00000463093 ZNF287Q9HBT7 754 aa16.22■□□□□ 0.19
SSBP1-203ENST00000463093 ZCCHC17Q9NP64 241 aaKnown RBP16.22■□□□□ 0.19
SSBP1-203ENST00000463093 ANAPC4Q9UJX5 808 aa16.22■□□□□ 0.19
SSBP1-203ENST00000463093 THSD7BQ9C0I4 1608 aa16.21■□□□□ 0.19
SSBP1-203ENST00000463093 MPHOSPH10O00566 681 aaKnown RBP16.21■□□□□ 0.19
SSBP1-203ENST00000463093 TBC1D8O95759 1140 aa16.21■□□□□ 0.19
SSBP1-203ENST00000463093 LBX1P52954 281 aa16.21■□□□□ 0.19
SSBP1-203ENST00000463093 RAB3GAP1Q15042 981 aa16.21■□□□□ 0.19
SSBP1-203ENST00000463093 SH3D19Q5HYK7 790 aa16.21■□□□□ 0.19
SSBP1-203ENST00000463093 GPAT2Q6NUI2 795 aa16.21■□□□□ 0.19
SSBP1-203ENST00000463093 TMEM179Q6ZVK1 233 aa16.21■□□□□ 0.19
SSBP1-203ENST00000463093 ANKRD23Q86SG2 305 aa16.21■□□□□ 0.19
SSBP1-203ENST00000463093 STK11IPQ8N1F8 1099 aa16.21■□□□□ 0.19
SSBP1-203ENST00000463093 DSCC1Q9BVC3 393 aa16.21■□□□□ 0.19
SSBP1-203ENST00000463093 IL25Q9H293 177 aa16.21■□□□□ 0.19
SSBP1-203ENST00000463093 R3HDMLQ9H3Y0 253 aa16.21■□□□□ 0.19
SSBP1-203ENST00000463093 TSKSQ9UJT2 592 aa16.21■□□□□ 0.19
SSBP1-203ENST00000463093 USP17L10C9JJH3 530 aa16.2■□□□□ 0.18
SSBP1-203ENST00000463093 FGRP09769 529 aa16.2■□□□□ 0.18
SSBP1-203ENST00000463093 RASA1P20936 1047 aa16.2■□□□□ 0.18
SSBP1-203ENST00000463093 PDE4BQ07343 736 aa16.2■□□□□ 0.18
SSBP1-203ENST00000463093 SIAH1Q8IUQ4 282 aa16.2■□□□□ 0.18
SSBP1-203ENST00000463093 ZNF444Q8N0Y2 327 aaPredicted RBP16.2■□□□□ 0.18
SSBP1-203ENST00000463093 ROBO3Q96MS0 1386 aa16.2■□□□□ 0.18
SSBP1-203ENST00000463093 ZMYM6O95789 1325 aa16.19■□□□□ 0.18
SSBP1-203ENST00000463093 RAD50Q92878 1312 aa16.19■□□□□ 0.18
SSBP1-203ENST00000463093 SGSM2O43147 1006 aa16.19■□□□□ 0.18
SSBP1-203ENST00000463093 CTDSPL2Q05D32 466 aa16.19■□□□□ 0.18
SSBP1-203ENST00000463093 NOM1Q5C9Z4 860 aaKnown RBP16.19■□□□□ 0.18
SSBP1-203ENST00000463093 GADL1Q6ZQY3 521 aa16.19■□□□□ 0.18
SSBP1-203ENST00000463093 ACER1Q8TDN7 264 aa16.19■□□□□ 0.18
SSBP1-203ENST00000463093 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 570 ms