RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 GOLGA6L2Q8N9W4 650 aaPredicted RBP10□□□□□ -0.81
GARNL3-212ENST00000463005 U2AF1L4Q8WU68 220 aaKnown RBP10□□□□□ -0.81
GARNL3-212ENST00000463005 FAM151AQ8WW52 585 aa10□□□□□ -0.81
GARNL3-212ENST00000463005 SLC4A5Q9BY07 1137 aa10□□□□□ -0.81
GARNL3-212ENST00000463005 C1orf115Q9H7X2 142 aa10□□□□□ -0.81
GARNL3-212ENST00000463005 ZNF112Q9UJU3 913 aa10□□□□□ -0.81
GARNL3-212ENST00000463005 BRCA2P51587 3418 aa10□□□□□ -0.81
GARNL3-212ENST00000463005 MYH13Q9UKX3 1938 aa9.99□□□□□ -0.81
GARNL3-212ENST00000463005 DOCK3Q8IZD9 2030 aa9.99□□□□□ -0.81
GARNL3-212ENST00000463005 F6X3S4 739 aa9.99□□□□□ -0.81
GARNL3-212ENST00000463005 CXCL11O14625 94 aa9.99□□□□□ -0.81
GARNL3-212ENST00000463005 PDE8BO95263 885 aa9.99□□□□□ -0.81
GARNL3-212ENST00000463005 CACNB3P54284 484 aa9.99□□□□□ -0.81
GARNL3-212ENST00000463005 FCGRTP55899 365 aa9.99□□□□□ -0.81
GARNL3-212ENST00000463005 CHAF1AQ13111 956 aaPredicted RBP9.99□□□□□ -0.81
GARNL3-212ENST00000463005 GRIK5Q16478 980 aa9.99□□□□□ -0.81
GARNL3-212ENST00000463005 MIGA2Q7L4E1 593 aa9.99□□□□□ -0.81
GARNL3-212ENST00000463005 WDR63Q8IWG1 891 aa9.99□□□□□ -0.81
GARNL3-212ENST00000463005 PARK7Q99497 189 aaKnown RBP9.99□□□□□ -0.81
GARNL3-212ENST00000463005 PUS3Q9BZE2 481 aaKnown RBP9.99□□□□□ -0.81
GARNL3-212ENST00000463005 ADGRA2Q96PE1 1338 aa9.99□□□□□ -0.81
GARNL3-212ENST00000463005 BHMG1C9JSJ3 638 aaPredicted RBP9.98□□□□□ -0.81
GARNL3-212ENST00000463005 HOXA2O43364 376 aa9.98□□□□□ -0.81
GARNL3-212ENST00000463005 FARP2O94887 1054 aaPredicted RBP9.98□□□□□ -0.81
GARNL3-212ENST00000463005 BCRP11274 1271 aa9.98□□□□□ -0.81
GARNL3-212ENST00000463005 INPP5BP32019 993 aa9.98□□□□□ -0.81
GARNL3-212ENST00000463005 PBX2P40425 430 aa9.98□□□□□ -0.81
GARNL3-212ENST00000463005 DIXDC1Q155Q3 683 aa9.98□□□□□ -0.81
GARNL3-212ENST00000463005 NOL9Q5SY16 702 aaKnown RBP9.98□□□□□ -0.81
GARNL3-212ENST00000463005 FASTKD5Q7L8L6 764 aaKnown RBP9.98□□□□□ -0.81
GARNL3-212ENST00000463005 WDR66Q8TBY9 1149 aa9.98□□□□□ -0.81
GARNL3-212ENST00000463005 SRCIN1Q9C0H9 1055 aa9.98□□□□□ -0.81
GARNL3-212ENST00000463005 PCDHGC3Q9UN70 934 aa9.98□□□□□ -0.81
GARNL3-212ENST00000463005 IQSEC3Q9UPP2 1182 aaPredicted RBP9.98□□□□□ -0.81
GARNL3-212ENST00000463005 PRKCZQ05513 592 aa9.97□□□□□ -0.81
GARNL3-212ENST00000463005 EXOSC9Q06265 439 aaKnown RBP9.97□□□□□ -0.81
GARNL3-212ENST00000463005 IRF5Q13568 498 aa9.97□□□□□ -0.81
GARNL3-212ENST00000463005 MOGSQ13724 837 aa9.97□□□□□ -0.81
GARNL3-212ENST00000463005 METTL24Q5JXM2 366 aa9.97□□□□□ -0.81
GARNL3-212ENST00000463005 ARID3AQ99856 593 aa9.97□□□□□ -0.81
GARNL3-212ENST00000463005 KIF16BQ96L93 1317 aa9.97□□□□□ -0.81
GARNL3-212ENST00000463005 FANCIQ9NVI1 1328 aa9.97□□□□□ -0.81
GARNL3-212ENST00000463005 ADCY3O60266 1144 aa9.96□□□□□ -0.82
GARNL3-212ENST00000463005 TFRCP02786 760 aaKnown RBP9.96□□□□□ -0.82
GARNL3-212ENST00000463005 CFHP08603 1231 aa9.96□□□□□ -0.82
GARNL3-212ENST00000463005 IFIT1P09914 478 aaKnown RBP9.96□□□□□ -0.82
GARNL3-212ENST00000463005 BMP8BP34820 402 aa9.96□□□□□ -0.82
GARNL3-212ENST00000463005 BCAMP50895 628 aa9.96□□□□□ -0.82
GARNL3-212ENST00000463005 RABL6Q3YEC7 729 aaPredicted RBP9.96□□□□□ -0.82
GARNL3-212ENST00000463005 GPAT2Q6NUI2 795 aa9.96□□□□□ -0.82
GARNL3-212ENST00000463005 KAZALD1Q96I82 304 aa9.96□□□□□ -0.82
GARNL3-212ENST00000463005 SUCLG2Q96I99 432 aa9.96□□□□□ -0.82
GARNL3-212ENST00000463005 UNC93B1Q9H1C4 597 aa9.96□□□□□ -0.82
GARNL3-212ENST00000463005 GABRQQ9UN88 632 aa9.96□□□□□ -0.82
GARNL3-212ENST00000463005 SLC45A1Q9Y2W3 748 aa9.96□□□□□ -0.82
GARNL3-212ENST00000463005 SALL2Q9Y467 1007 aaPredicted RBP9.96□□□□□ -0.82
GARNL3-212ENST00000463005 UTYO14607 1347 aa9.96□□□□□ -0.82
GARNL3-212ENST00000463005 LILRB3O75022 631 aa9.95□□□□□ -0.82
GARNL3-212ENST00000463005 FLT3LGP49771 235 aa9.95□□□□□ -0.82
GARNL3-212ENST00000463005 LSM11P83369 360 aaKnown RBP eCLIP9.95□□□□□ -0.82
GARNL3-212ENST00000463005 FUT2Q10981 343 aa9.95□□□□□ -0.82
GARNL3-212ENST00000463005 LRRC24Q50LG9 513 aa9.95□□□□□ -0.82
GARNL3-212ENST00000463005 ADGRD1Q6QNK2 874 aa9.95□□□□□ -0.82
GARNL3-212ENST00000463005 SLC4A10Q6U841 1118 aa9.95□□□□□ -0.82
GARNL3-212ENST00000463005 VGLL2Q8N8G2 317 aa9.95□□□□□ -0.82
GARNL3-212ENST00000463005 ZFRQ96KR1 1074 aaKnown RBP9.95□□□□□ -0.82
GARNL3-212ENST00000463005 PTPRFP10586 1907 aa9.95□□□□□ -0.82
GARNL3-212ENST00000463005 ALPK3Q96L96 1907 aa9.94□□□□□ -0.82
GARNL3-212ENST00000463005 A0A0G2JLL6 359 aaPredicted RBP9.94□□□□□ -0.82
GARNL3-212ENST00000463005 TNPO2O14787 897 aaKnown RBP9.94□□□□□ -0.82
GARNL3-212ENST00000463005 NBPF7P0C2Y1 421 aaPredicted RBP9.94□□□□□ -0.82
GARNL3-212ENST00000463005 FDX1P10109 184 aa9.94□□□□□ -0.82
GARNL3-212ENST00000463005 CYP2C8P10632 490 aa9.94□□□□□ -0.82
GARNL3-212ENST00000463005 FGFR2P21802 821 aa9.94□□□□□ -0.82
GARNL3-212ENST00000463005 TCP10Q12799 353 aa9.94□□□□□ -0.82
GARNL3-212ENST00000463005 PUM3Q15397 648 aaKnown RBP9.94□□□□□ -0.82
GARNL3-212ENST00000463005 PPP2R2DQ66LE6 453 aa9.94□□□□□ -0.82
GARNL3-212ENST00000463005 CDC42EP5Q6NZY7 148 aa9.94□□□□□ -0.82
GARNL3-212ENST00000463005 NECAB2Q7Z6G3 386 aa9.94□□□□□ -0.82
GARNL3-212ENST00000463005 PRRT2Q7Z6L0 340 aaPredicted RBP9.94□□□□□ -0.82
GARNL3-212ENST00000463005 ANKLE1Q8NAG6 615 aa9.94□□□□□ -0.82
GARNL3-212ENST00000463005 COA7Q96BR5 231 aa9.94□□□□□ -0.82
GARNL3-212ENST00000463005 DEFB118Q96PH6 123 aa9.94□□□□□ -0.82
GARNL3-212ENST00000463005 PAK6Q9NQU5 681 aaPredicted RBP9.94□□□□□ -0.82
GARNL3-212ENST00000463005 STAP2Q9UGK3 403 aa9.94□□□□□ -0.82
GARNL3-212ENST00000463005 ZHX2Q9Y6X8 837 aa9.94□□□□□ -0.82
GARNL3-212ENST00000463005 MYH2Q9UKX2 1941 aa9.94□□□□□ -0.82
GARNL3-212ENST00000463005 SZT2Q5T011 3432 aa9.93□□□□□ -0.82
GARNL3-212ENST00000463005 ENTPD3O75355 529 aa9.93□□□□□ -0.82
GARNL3-212ENST00000463005 AP1G2O75843 785 aa9.93□□□□□ -0.82
GARNL3-212ENST00000463005 INHAP05111 366 aa9.93□□□□□ -0.82
GARNL3-212ENST00000463005 MAP3K10Q02779 954 aa9.93□□□□□ -0.82
GARNL3-212ENST00000463005 SCYL3Q8IZE3 742 aa9.93□□□□□ -0.82
GARNL3-212ENST00000463005 LPIN2Q92539 896 aa9.93□□□□□ -0.82
GARNL3-212ENST00000463005 SYMPKQ92797 1274 aaKnown RBP9.93□□□□□ -0.82
GARNL3-212ENST00000463005 PAWRQ96IZ0 340 aaKnown RBP9.93□□□□□ -0.82
GARNL3-212ENST00000463005 GDF15Q99988 308 aa9.93□□□□□ -0.82
GARNL3-212ENST00000463005 NBPF3Q9H094 633 aa9.93□□□□□ -0.82
GARNL3-212ENST00000463005 BICC1Q9H694 974 aaKnown RBP9.93□□□□□ -0.82
GARNL3-212ENST00000463005 PICK1Q9NRD5 415 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms