RNA–Protein interactions for RNA: ENST00000462862.1

ERCC4-203, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-203ENST00000462862 SPTY2D1Q68D10 685 aaPredicted RBP4.85□□□□□ -1.63
ERCC4-203ENST00000462862 ZNF772Q68DY9 489 aaPredicted RBP4.85□□□□□ -1.63
ERCC4-203ENST00000462862 C15orf52Q6ZUT6 534 aaKnown RBP4.85□□□□□ -1.63
ERCC4-203ENST00000462862 DDX46Q7L014 1031 aaKnown RBP4.85□□□□□ -1.63
ERCC4-203ENST00000462862 ZNF589Q86UQ0 364 aaPredicted RBP4.85□□□□□ -1.63
ERCC4-203ENST00000462862 BPHLQ86WA6 291 aaPredicted RBP4.85□□□□□ -1.63
ERCC4-203ENST00000462862 SPATA5Q8NB90 893 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 WASF1Q92558 559 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 IRF7Q92985 503 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 GTF3C6Q969F1 213 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 AIDAQ96BJ3 306 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 ARXQ96QS3 562 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 KRT23Q9C075 422 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 BCL11AQ9H165 835 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 IL25Q9H293 177 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 CCNL1Q9UK58 526 aaPredicted RBP4.85□□□□□ -1.63
ERCC4-203ENST00000462862 LEMD3Q9Y2U8 911 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 MAST3O60307 1309 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 SALL1Q9NSC2 1324 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 LY75O60449 1722 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 SOBPA7XYQ1 873 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 PATL2C9JE40 543 aaKnown RBP4.84□□□□□ -1.63
ERCC4-203ENST00000462862 ZIC2O95409 532 aaPredicted RBP4.84□□□□□ -1.63
ERCC4-203ENST00000462862 SLC3A2P08195 630 aaKnown RBP4.84□□□□□ -1.63
ERCC4-203ENST00000462862 CYP21A2P08686 494 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 SYT1P21579 422 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 GJB2P29033 226 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 RFC4P35249 363 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 GRM5P41594 1212 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 MCAMP43121 646 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 GSTO1P78417 241 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 CCDC173Q0VFZ6 552 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 NR5A1Q13285 461 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 WASHC4Q2M389 1173 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 UVSSAQ2YD98 709 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 TRAPPC3LQ5T215 181 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 SLC9C2Q5TAH2 1124 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 MCTP1Q6DN14 999 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 BRAPQ7Z569 592 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 NBPF5PQ86XG9 351 aaPredicted RBP4.84□□□□□ -1.63
ERCC4-203ENST00000462862 ARMC2Q8NEN0 867 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 SMARCC2Q8TAQ2 1214 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 ZFAND3Q9H8U3 227 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 ZNF287Q9HBT7 754 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 LMBRD1Q9NUN5 540 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 SUGT1Q9Y2Z0 365 aa4.84□□□□□ -1.63
ERCC4-203ENST00000462862 MORC2Q9Y6X9 1032 aaPredicted RBP4.84□□□□□ -1.63
ERCC4-203ENST00000462862 AFF2P51816 1311 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 STK36Q9NRP7 1315 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 ERICH2A1L162 156 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 E7EWF7 191 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 H3BM21 787 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 H3BQV1 296 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 SOCS7O14512 581 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 CPLX1O14810 134 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 PLSCR1O15162 318 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 NR3C2P08235 984 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 CALM1P0DP23 149 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 CALM2P0DP24 149 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 CALM3P0DP25 149 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 PDE6AP16499 860 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 ZAP70P43403 619 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 RPS8P62241 208 aaKnown RBP4.83□□□□□ -1.64
ERCC4-203ENST00000462862 ST5P78524 1137 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 EXOSC10Q01780 885 aaKnown RBP4.83□□□□□ -1.64
ERCC4-203ENST00000462862 CHRNDQ07001 517 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 TOB2Q14106 344 aaPredicted RBP4.83□□□□□ -1.64
ERCC4-203ENST00000462862 ME3Q16798 604 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 ADCK5Q3MIX3 580 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 CCDC183Q5T5S1 534 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 LARP1BQ659C4 914 aaKnown RBP4.83□□□□□ -1.64
ERCC4-203ENST00000462862 SYNE3Q6ZMZ3 975 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 SGMS1Q86VZ5 419 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 VPS37DQ86XT2 251 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 CCDC83Q8IWF9 413 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 AMOTL1Q8IY63 956 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 LINC00116Q8NCU8 138 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 WDR66Q8TBY9 1149 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 TBC1D22AQ8WUA7 517 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 STAG1Q8WVM7 1258 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 OSBP2Q969R2 916 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 ITPKCQ96DU7 683 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 ACSBG1Q96GR2 724 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 ZNF594Q96JF6 807 aaPredicted RBP4.83□□□□□ -1.64
ERCC4-203ENST00000462862 ZNF396Q96N95 335 aaPredicted RBP4.83□□□□□ -1.64
ERCC4-203ENST00000462862 BRIP1Q9BX63 1249 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 PUS3Q9BZE2 481 aaKnown RBP4.83□□□□□ -1.64
ERCC4-203ENST00000462862 NAPBQ9H115 298 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 ATP8A2Q9NTI2 1148 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 DDX19AQ9NUU7 478 aaKnown RBP4.83□□□□□ -1.64
ERCC4-203ENST00000462862 RGS17Q9UGC6 210 aaPredicted RBP4.83□□□□□ -1.64
ERCC4-203ENST00000462862 ANAPC4Q9UJX5 808 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 TPCN1Q9ULQ1 816 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 ANGEL1Q9UNK9 670 aaKnown RBP4.83□□□□□ -1.64
ERCC4-203ENST00000462862 MTMR6Q9Y217 621 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 ZDHHC9Q9Y397 364 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 BTAF1O14981 1849 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 TIAM2Q8IVF5 1701 aa4.83□□□□□ -1.64
ERCC4-203ENST00000462862 MYH7P12883 1935 aa4.82□□□□□ -1.64
ERCC4-203ENST00000462862 XDHP47989 1333 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms