RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 LOC100289279A0A1B0GTE1 492 aa10.04□□□□□ -0.8
UBE4B-204ENST00000462658 C1QTNF9BB2RNN3 333 aa10.04□□□□□ -0.8
UBE4B-204ENST00000462658 DLGAP3O95886 979 aa10.04□□□□□ -0.8
UBE4B-204ENST00000462658 MAOBP27338 520 aa10.04□□□□□ -0.8
UBE4B-204ENST00000462658 PPP2R3AQ06190 1150 aa10.04□□□□□ -0.8
UBE4B-204ENST00000462658 POU4F3Q15319 338 aa10.04□□□□□ -0.8
UBE4B-204ENST00000462658 CCDC85BQ15834 202 aaPredicted RBP10.04□□□□□ -0.8
UBE4B-204ENST00000462658 LDLRAD1Q5T700 205 aa10.04□□□□□ -0.8
UBE4B-204ENST00000462658 ACAD11Q709F0 780 aa10.04□□□□□ -0.8
UBE4B-204ENST00000462658 CD163Q86VB7 1156 aa10.04□□□□□ -0.8
UBE4B-204ENST00000462658 TMEM151AQ8N4L1 468 aa10.04□□□□□ -0.8
UBE4B-204ENST00000462658 DDX54Q8TDD1 881 aaKnown RBP10.04□□□□□ -0.8
UBE4B-204ENST00000462658 ANKRD24Q8TF21 1146 aa10.04□□□□□ -0.8
UBE4B-204ENST00000462658 BACH2Q9BYV9 841 aa10.04□□□□□ -0.8
UBE4B-204ENST00000462658 ZC3H12CQ9C0D7 883 aaKnown RBP10.04□□□□□ -0.8
UBE4B-204ENST00000462658 CEP44Q9C0F1 390 aa10.04□□□□□ -0.8
UBE4B-204ENST00000462658 BCL11AQ9H165 835 aa10.04□□□□□ -0.8
UBE4B-204ENST00000462658 ZNF335Q9H4Z2 1342 aaPredicted RBP10.04□□□□□ -0.8
UBE4B-204ENST00000462658 IQGAP1P46940 1657 aa10.03□□□□□ -0.8
UBE4B-204ENST00000462658 C9orf172C9J069 976 aa10.03□□□□□ -0.8
UBE4B-204ENST00000462658 LTKP29376 864 aa10.03□□□□□ -0.8
UBE4B-204ENST00000462658 TSNAXIP1Q2TAA8 658 aa10.03□□□□□ -0.8
UBE4B-204ENST00000462658 TMEM132EQ6IEE7 984 aa10.03□□□□□ -0.8
UBE4B-204ENST00000462658 KIAA1211Q6ZU35 1233 aa10.03□□□□□ -0.8
UBE4B-204ENST00000462658 SULF2Q8IWU5 870 aa10.03□□□□□ -0.8
UBE4B-204ENST00000462658 ALKQ9UM73 1620 aa10.03□□□□□ -0.8
UBE4B-204ENST00000462658 KIF7Q2M1P5 1343 aa10.03□□□□□ -0.8
UBE4B-204ENST00000462658 TMEM2Q9UHN6 1383 aa10.02□□□□□ -0.8
UBE4B-204ENST00000462658 F8W735 103 aaPredicted RBP10.02□□□□□ -0.81
UBE4B-204ENST00000462658 ITGB2P05107 769 aa10.02□□□□□ -0.81
UBE4B-204ENST00000462658 CYP11A1P05108 521 aa10.02□□□□□ -0.81
UBE4B-204ENST00000462658 MBTPS1Q14703 1052 aa10.02□□□□□ -0.81
UBE4B-204ENST00000462658 MAP3K11Q16584 847 aa10.02□□□□□ -0.81
UBE4B-204ENST00000462658 RASIP1Q5U651 963 aa10.02□□□□□ -0.81
UBE4B-204ENST00000462658 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.02□□□□□ -0.81
UBE4B-204ENST00000462658 THEMISQ8N1K5 641 aaPredicted RBP10.02□□□□□ -0.81
UBE4B-204ENST00000462658 TMEM87AQ8NBN3 555 aa10.02□□□□□ -0.81
UBE4B-204ENST00000462658 TESK2Q96S53 571 aa10.02□□□□□ -0.81
UBE4B-204ENST00000462658 EIF3AQ14152 1382 aaKnown RBP10.01□□□□□ -0.81
UBE4B-204ENST00000462658 SETBP1Q9Y6X0 1596 aa10.01□□□□□ -0.81
UBE4B-204ENST00000462658 XIRP1Q702N8 1843 aaKnown RBP10.01□□□□□ -0.81
UBE4B-204ENST00000462658 RECKO95980 971 aa10.01□□□□□ -0.81
UBE4B-204ENST00000462658 IREB2P48200 963 aaKnown RBP10.01□□□□□ -0.81
UBE4B-204ENST00000462658 AP3B2Q13367 1082 aa10.01□□□□□ -0.81
UBE4B-204ENST00000462658 ADGRE1Q14246 886 aa10.01□□□□□ -0.81
UBE4B-204ENST00000462658 PLA2G4EQ3MJ16 856 aa10.01□□□□□ -0.81
UBE4B-204ENST00000462658 SV2BQ7L1I2 683 aa10.01□□□□□ -0.81
UBE4B-204ENST00000462658 CORO1BQ9BR76 489 aa10.01□□□□□ -0.81
UBE4B-204ENST00000462658 POLR3GLQ9BT43 218 aa10.01□□□□□ -0.81
UBE4B-204ENST00000462658 RUSC1Q9BVN2 902 aa10.01□□□□□ -0.81
UBE4B-204ENST00000462658 NPHP4O75161 1426 aaPredicted RBP10□□□□□ -0.81
UBE4B-204ENST00000462658 F6X3S4 739 aa10□□□□□ -0.81
UBE4B-204ENST00000462658 BMP6P22004 513 aa10□□□□□ -0.81
UBE4B-204ENST00000462658 NME2P22392 152 aa10□□□□□ -0.81
UBE4B-204ENST00000462658 ARNTP27540 789 aa10□□□□□ -0.81
UBE4B-204ENST00000462658 NOS3P29474 1203 aa10□□□□□ -0.81
UBE4B-204ENST00000462658 ST13P50502 369 aaKnown RBP10□□□□□ -0.81
UBE4B-204ENST00000462658 TMF1P82094 1093 aa10□□□□□ -0.81
UBE4B-204ENST00000462658 GRIN3AQ8TCU5 1115 aa10□□□□□ -0.81
UBE4B-204ENST00000462658 WFDC12Q8WWY7 111 aa10□□□□□ -0.81
UBE4B-204ENST00000462658 AKTIPQ9H8T0 292 aa10□□□□□ -0.81
UBE4B-204ENST00000462658 CBX8Q9HC52 389 aa10□□□□□ -0.81
UBE4B-204ENST00000462658 EID1Q9Y6B2 187 aa10□□□□□ -0.81
UBE4B-204ENST00000462658 GSTP1P09211 210 aaKnown RBP9.99□□□□□ -0.81
UBE4B-204ENST00000462658 NRG1Q02297 640 aaPredicted RBP9.99□□□□□ -0.81
UBE4B-204ENST00000462658 PCNX4Q63HM2 1172 aa9.99□□□□□ -0.81
UBE4B-204ENST00000462658 MPRIPQ6WCQ1 1025 aa9.99□□□□□ -0.81
UBE4B-204ENST00000462658 PDZD3Q86UT5 571 aa9.99□□□□□ -0.81
UBE4B-204ENST00000462658 TMEM130Q8N3G9 435 aa9.99□□□□□ -0.81
UBE4B-204ENST00000462658 ADGRB1O14514 1584 aa9.99□□□□□ -0.81
UBE4B-204ENST00000462658 VAMP1P23763 118 aa9.98□□□□□ -0.81
UBE4B-204ENST00000462658 PDE3AQ14432 1141 aa9.98□□□□□ -0.81
UBE4B-204ENST00000462658 KCNB2Q92953 911 aa9.98□□□□□ -0.81
UBE4B-204ENST00000462658 CCDC86Q9H6F5 360 aaKnown RBP9.98□□□□□ -0.81
UBE4B-204ENST00000462658 STK26Q9P289 416 aa9.98□□□□□ -0.81
UBE4B-204ENST00000462658 CENPJQ9HC77 1338 aaPredicted RBP9.98□□□□□ -0.81
UBE4B-204ENST00000462658 LIG1P18858 919 aa9.97□□□□□ -0.81
UBE4B-204ENST00000462658 TTBK2Q6IQ55 1244 aa9.97□□□□□ -0.81
UBE4B-204ENST00000462658 FBXO41Q8TF61 875 aa9.97□□□□□ -0.81
UBE4B-204ENST00000462658 DISP3Q9P2K9 1392 aa9.97□□□□□ -0.81
UBE4B-204ENST00000462658 NRXN3Q9Y4C0 1643 aa9.96□□□□□ -0.81
UBE4B-204ENST00000462658 ANP32CO43423 234 aa9.96□□□□□ -0.82
UBE4B-204ENST00000462658 EIF4EBP3O60516 100 aaPredicted RBP9.96□□□□□ -0.82
UBE4B-204ENST00000462658 GLB1P16278 677 aa9.96□□□□□ -0.82
UBE4B-204ENST00000462658 MAP1SQ66K74 1059 aaPredicted RBP9.96□□□□□ -0.82
UBE4B-204ENST00000462658 TXNRD3Q86VQ6 643 aa9.96□□□□□ -0.82
UBE4B-204ENST00000462658 WDR89Q96FK6 387 aaPredicted RBP9.96□□□□□ -0.82
UBE4B-204ENST00000462658 TMPRSS13Q9BYE2 586 aa9.96□□□□□ -0.82
UBE4B-204ENST00000462658 RNF208Q9H0X6 261 aa9.96□□□□□ -0.82
UBE4B-204ENST00000462658 PLEKHG1Q9ULL1 1385 aa9.96□□□□□ -0.82
UBE4B-204ENST00000462658 LIG3P49916 1009 aa9.95□□□□□ -0.82
UBE4B-204ENST00000462658 ZNF252P-AS1Q0IIN9 211 aa9.95□□□□□ -0.82
UBE4B-204ENST00000462658 EXOSC6Q5RKV6 272 aaKnown RBP9.95□□□□□ -0.82
UBE4B-204ENST00000462658 ANKLE2Q86XL3 938 aa9.95□□□□□ -0.82
UBE4B-204ENST00000462658 MEGF10Q96KG7 1140 aa9.95□□□□□ -0.82
UBE4B-204ENST00000462658 NOC4LQ9BVI4 516 aaKnown RBP9.95□□□□□ -0.82
UBE4B-204ENST00000462658 EMILIN2Q9BXX0 1053 aa9.95□□□□□ -0.82
UBE4B-204ENST00000462658 TLR6Q9Y2C9 796 aa9.95□□□□□ -0.82
UBE4B-204ENST00000462658 SAMM50Q9Y512 469 aa9.95□□□□□ -0.82
UBE4B-204ENST00000462658 YTHDC2Q9H6S0 1430 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms