RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 TBC1D8O95759 1140 aa11.41□□□□□ -0.58
PKP4-208ENST00000462335 GH2P01242 217 aa11.41□□□□□ -0.58
PKP4-208ENST00000462335 LBX1P52954 281 aa11.41□□□□□ -0.58
PKP4-208ENST00000462335 ATP2B2Q01814 1243 aa11.41□□□□□ -0.58
PKP4-208ENST00000462335 PDE4BQ07343 736 aa11.41□□□□□ -0.58
PKP4-208ENST00000462335 SPP2Q13103 211 aa11.41□□□□□ -0.58
PKP4-208ENST00000462335 NMIQ13287 307 aaPredicted RBP11.41□□□□□ -0.58
PKP4-208ENST00000462335 PABPC4Q13310 644 aaKnown RBP eCLIP11.41□□□□□ -0.58
PKP4-208ENST00000462335 C12orf60Q5U649 245 aa11.41□□□□□ -0.58
PKP4-208ENST00000462335 IFNL3Q8IZI9 196 aa11.41□□□□□ -0.58
PKP4-208ENST00000462335 ZNF280CQ8ND82 737 aa11.41□□□□□ -0.58
PKP4-208ENST00000462335 SEC62Q99442 399 aaKnown RBP11.41□□□□□ -0.58
PKP4-208ENST00000462335 TOMM22Q9NS69 142 aa11.41□□□□□ -0.58
PKP4-208ENST00000462335 GSG1L2A8MUP6 293 aa11.4□□□□□ -0.58
PKP4-208ENST00000462335 RAD21O60216 631 aa11.4□□□□□ -0.58
PKP4-208ENST00000462335 CYP2D6P10635 497 aa11.4□□□□□ -0.58
PKP4-208ENST00000462335 PDE4AP27815 886 aa11.4□□□□□ -0.58
PKP4-208ENST00000462335 ARHGEF6Q15052 776 aa11.4□□□□□ -0.58
PKP4-208ENST00000462335 TAF1CQ15572 869 aaPredicted RBP11.4□□□□□ -0.58
PKP4-208ENST00000462335 CTR9Q6PD62 1173 aa11.4□□□□□ -0.58
PKP4-208ENST00000462335 CCDC129Q6ZRS4 1044 aa11.4□□□□□ -0.58
PKP4-208ENST00000462335 KIAA1211Q6ZU35 1233 aa11.4□□□□□ -0.58
PKP4-208ENST00000462335 CCDC17Q96LX7 622 aa11.4□□□□□ -0.58
PKP4-208ENST00000462335 FAM227BQ96M60 508 aa11.4□□□□□ -0.58
PKP4-208ENST00000462335 CYP2D7A0A087X1C5 515 aa11.39□□□□□ -0.59
PKP4-208ENST00000462335 C19orf81C9J6K1 198 aa11.39□□□□□ -0.59
PKP4-208ENST00000462335 SLURP2P0DP57 97 aa11.39□□□□□ -0.59
PKP4-208ENST00000462335 GJA5P36382 358 aa11.39□□□□□ -0.59
PKP4-208ENST00000462335 CDK8P49336 464 aa11.39□□□□□ -0.59
PKP4-208ENST00000462335 KIF22Q14807 665 aa11.39□□□□□ -0.59
PKP4-208ENST00000462335 SBK1Q52WX2 424 aa11.39□□□□□ -0.59
PKP4-208ENST00000462335 METTL16Q86W50 562 aaKnown RBP11.39□□□□□ -0.59
PKP4-208ENST00000462335 DYNLL2Q96FJ2 89 aa11.39□□□□□ -0.59
PKP4-208ENST00000462335 SH2D4AQ9H788 454 aa11.39□□□□□ -0.59
PKP4-208ENST00000462335 ARHGEF10LQ9HCE6 1279 aa11.39□□□□□ -0.59
PKP4-208ENST00000462335 CTNNA3Q9UI47 895 aa11.39□□□□□ -0.59
PKP4-208ENST00000462335 PNMA3Q9UL41 463 aa11.39□□□□□ -0.59
PKP4-208ENST00000462335 ZBTB21Q9ULJ3 1066 aa11.39□□□□□ -0.59
PKP4-208ENST00000462335 AFG3L2Q9Y4W6 797 aa11.39□□□□□ -0.59
PKP4-208ENST00000462335 CCDC171Q6TFL3 1326 aa11.38□□□□□ -0.59
PKP4-208ENST00000462335 NAV1Q8NEY1 1877 aa11.38□□□□□ -0.59
PKP4-208ENST00000462335 CDK5RAP2Q96SN8 1893 aa11.38□□□□□ -0.59
PKP4-208ENST00000462335 FOCADQ5VW36 1801 aa11.38□□□□□ -0.59
PKP4-208ENST00000462335 USP17L10C9JJH3 530 aa11.38□□□□□ -0.59
PKP4-208ENST00000462335 PDHXO00330 501 aa11.38□□□□□ -0.59
PKP4-208ENST00000462335 OSBPP22059 807 aa11.38□□□□□ -0.59
PKP4-208ENST00000462335 USP14P54578 494 aa11.38□□□□□ -0.59
PKP4-208ENST00000462335 TATDN1Q6P1N9 297 aa11.38□□□□□ -0.59
PKP4-208ENST00000462335 TMEM179Q6ZVK1 233 aa11.38□□□□□ -0.59
PKP4-208ENST00000462335 SMCR8Q8TEV9 937 aaPredicted RBP11.38□□□□□ -0.59
PKP4-208ENST00000462335 BRI3BPQ8WY22 251 aa11.38□□□□□ -0.59
PKP4-208ENST00000462335 PRDM10Q9NQV6 1147 aa11.38□□□□□ -0.59
PKP4-208ENST00000462335 BAZ2AQ9UIF9 1905 aaKnown RBP11.37□□□□□ -0.59
PKP4-208ENST00000462335 A0A0D9SFI3 127 aa11.37□□□□□ -0.59
PKP4-208ENST00000462335 TESPA1A2RU30 521 aaPredicted RBP11.37□□□□□ -0.59
PKP4-208ENST00000462335 BTBD19C9JJ37 291 aa11.37□□□□□ -0.59
PKP4-208ENST00000462335 ZNF213O14771 459 aa11.37□□□□□ -0.59
PKP4-208ENST00000462335 TSPY3P0CV98 308 aa11.37□□□□□ -0.59
PKP4-208ENST00000462335 TSPY8P0CW00 308 aa11.37□□□□□ -0.59
PKP4-208ENST00000462335 HSPA8P11142 646 aaKnown RBP11.37□□□□□ -0.59
PKP4-208ENST00000462335 SHMT1P34896 483 aa11.37□□□□□ -0.59
PKP4-208ENST00000462335 HMGCS2P54868 508 aa11.37□□□□□ -0.59
PKP4-208ENST00000462335 IRX3P78415 501 aaPredicted RBP11.37□□□□□ -0.59
PKP4-208ENST00000462335 MTMR2Q13614 643 aa11.37□□□□□ -0.59
PKP4-208ENST00000462335 ZYXQ15942 572 aaKnown RBP11.37□□□□□ -0.59
PKP4-208ENST00000462335 PPP4R3BQ5MIZ7 849 aa11.37□□□□□ -0.59
PKP4-208ENST00000462335 USP17L2Q6R6M4 530 aa11.37□□□□□ -0.59
PKP4-208ENST00000462335 C16orf86Q6ZW13 317 aa11.37□□□□□ -0.59
PKP4-208ENST00000462335 ANKRD23Q86SG2 305 aa11.37□□□□□ -0.59
PKP4-208ENST00000462335 CCDC84Q86UT8 332 aaPredicted RBP11.37□□□□□ -0.59
PKP4-208ENST00000462335 CCAR1Q8IX12 1150 aaKnown RBP11.37□□□□□ -0.59
PKP4-208ENST00000462335 MS4A4AQ96JQ5 239 aa11.37□□□□□ -0.59
PKP4-208ENST00000462335 PARK7Q99497 189 aaKnown RBP11.37□□□□□ -0.59
PKP4-208ENST00000462335 WDR18Q9BV38 432 aa11.37□□□□□ -0.59
PKP4-208ENST00000462335 ZCCHC17Q9NP64 241 aaKnown RBP11.37□□□□□ -0.59
PKP4-208ENST00000462335 ISY1Q9ULR0 285 aaKnown RBP11.37□□□□□ -0.59
PKP4-208ENST00000462335 KCNH4Q9UQ05 1017 aa11.37□□□□□ -0.59
PKP4-208ENST00000462335 OTOFQ9HC10 1997 aa11.36□□□□□ -0.59
PKP4-208ENST00000462335 A0A0G2JLL6 359 aaPredicted RBP11.36□□□□□ -0.59
PKP4-208ENST00000462335 IGF2BP3O00425 579 aaKnown RBP eCLIP11.36□□□□□ -0.59
PKP4-208ENST00000462335 RANBP6O60518 1105 aaKnown RBP11.36□□□□□ -0.59
PKP4-208ENST00000462335 FKTNO75072 461 aa11.36□□□□□ -0.59
PKP4-208ENST00000462335 HSPD1P10809 573 aaKnown RBP11.36□□□□□ -0.59
PKP4-208ENST00000462335 BACE1P56817 501 aa11.36□□□□□ -0.59
PKP4-208ENST00000462335 PPARAQ07869 468 aa11.36□□□□□ -0.59
PKP4-208ENST00000462335 CRHR2Q13324 411 aa11.36□□□□□ -0.59
PKP4-208ENST00000462335 SEPT2Q15019 361 aa11.36□□□□□ -0.59
PKP4-208ENST00000462335 IMMTQ16891 758 aaKnown RBP11.36□□□□□ -0.59
PKP4-208ENST00000462335 RRP12Q5JTH9 1297 aaKnown RBP11.36□□□□□ -0.59
PKP4-208ENST00000462335 PRRT2Q7Z6L0 340 aaPredicted RBP11.36□□□□□ -0.59
PKP4-208ENST00000462335 PROCA1Q8NCQ7 364 aaPredicted RBP11.36□□□□□ -0.59
PKP4-208ENST00000462335 SLC44A5Q8NCS7 719 aa11.36□□□□□ -0.59
PKP4-208ENST00000462335 RNF41Q9H4P4 317 aaPredicted RBP11.36□□□□□ -0.59
PKP4-208ENST00000462335 DNAJC18Q9H819 358 aa11.36□□□□□ -0.59
PKP4-208ENST00000462335 KANSL2Q9H9L4 492 aa11.36□□□□□ -0.59
PKP4-208ENST00000462335 CWC22Q9HCG8 908 aaKnown RBP11.36□□□□□ -0.59
PKP4-208ENST00000462335 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.36□□□□□ -0.59
PKP4-208ENST00000462335 DOCK1Q14185 1865 aa11.36□□□□□ -0.59
PKP4-208ENST00000462335 TSPY2A6NKD2 308 aa11.35□□□□□ -0.59
PKP4-208ENST00000462335 GPR25O00155 361 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms