RNA–Protein interactions for RNA: ENST00000462317.5

MUC1-214, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 3

Gene MUC1, Length 1,112 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-214	ENST00000462317	FRAT1	Q92837	279 aa	Predicted RBP	18.23	■□□□□ 0.51
MUC1-214	ENST00000462317	CLUAP1	Q96AJ1	413 aa		18.23	■□□□□ 0.51
MUC1-214	ENST00000462317	NUDT12	Q9BQG2	462 aa		18.23	■□□□□ 0.51
MUC1-214	ENST00000462317	RBPJL	Q9UBG7	517 aa		18.23	■□□□□ 0.51
MUC1-214	ENST00000462317	SAP30BP	Q9UHR5	308 aa	Known RBP	18.23	■□□□□ 0.51
MUC1-214	ENST00000462317	OGDHL	Q9ULD0	1010 aa		18.23	■□□□□ 0.51
MUC1-214	ENST00000462317	PHIP	Q8WWQ0	1821 aa		18.23	■□□□□ 0.51
MUC1-214	ENST00000462317	COL2A1	P02458	1487 aa	Predicted RBP	18.22	■□□□□ 0.51
MUC1-214	ENST00000462317	TRIM27	P14373	513 aa		18.22	■□□□□ 0.51
MUC1-214	ENST00000462317	MAGEA10	P43363	369 aa	Predicted RBP	18.22	■□□□□ 0.51
MUC1-214	ENST00000462317	TTC39A	Q5SRH9	613 aa		18.22	■□□□□ 0.51
MUC1-214	ENST00000462317	MAP3K21	Q5TCX8	1036 aa		18.22	■□□□□ 0.51
MUC1-214	ENST00000462317	FOXP4	Q8IVH2	680 aa	Predicted RBP	18.22	■□□□□ 0.51
MUC1-214	ENST00000462317	TRIM34	Q9BYJ4	488 aa		18.22	■□□□□ 0.51
MUC1-214	ENST00000462317	C19orf81	C9J6K1	198 aa		18.21	■□□□□ 0.51
MUC1-214	ENST00000462317	USP17L10	C9JJH3	530 aa		18.21	■□□□□ 0.51
MUC1-214	ENST00000462317	CYP2E1	P05181	493 aa	Predicted RBP	18.21	■□□□□ 0.51
MUC1-214	ENST00000462317	PLCG2	P16885	1265 aa		18.21	■□□□□ 0.51
MUC1-214	ENST00000462317	PPP4C	P60510	307 aa		18.21	■□□□□ 0.51
MUC1-214	ENST00000462317	POTEE	Q6S8J3	1075 aa		18.21	■□□□□ 0.51
MUC1-214	ENST00000462317		Q7L0L9	218 aa		18.21	■□□□□ 0.51
MUC1-214	ENST00000462317	CCAR1	Q8IX12	1150 aa	Known RBP	18.21	■□□□□ 0.51
MUC1-214	ENST00000462317	DBNDD2	Q9BQY9	259 aa		18.21	■□□□□ 0.51
MUC1-214	ENST00000462317	PAGR1	Q9BTK6	254 aa		18.21	■□□□□ 0.51
MUC1-214	ENST00000462317	PORCN	Q9H237	461 aa		18.21	■□□□□ 0.51
MUC1-214	ENST00000462317	EMILIN3	Q9NT22	766 aa		18.21	■□□□□ 0.51
MUC1-214	ENST00000462317	FLT1	P17948	1338 aa		18.21	■□□□□ 0.51
MUC1-214	ENST00000462317	IPO8	O15397	1037 aa	Known RBP	18.2	■□□□□ 0.5
MUC1-214	ENST00000462317	BCAR3	O75815	825 aa		18.2	■□□□□ 0.5
MUC1-214	ENST00000462317	XRCC5	P13010	732 aa	Known RBP	18.2	■□□□□ 0.5
MUC1-214	ENST00000462317	CACNB2	Q08289	660 aa	Predicted RBP	18.2	■□□□□ 0.5
MUC1-214	ENST00000462317	CCL14	Q16627	93 aa		18.2	■□□□□ 0.5
MUC1-214	ENST00000462317	CCDC158	Q5M9N0	1113 aa		18.2	■□□□□ 0.5
MUC1-214	ENST00000462317	DEFB123	Q8N688	67 aa		18.2	■□□□□ 0.5
MUC1-214	ENST00000462317	ZBTB21	Q9ULJ3	1066 aa		18.2	■□□□□ 0.5
MUC1-214	ENST00000462317	PTPRF	P10586	1907 aa		18.19	■□□□□ 0.5
MUC1-214	ENST00000462317	ZKSCAN1	P17029	563 aa	Predicted RBP	18.19	■□□□□ 0.5
MUC1-214	ENST00000462317	CCND3	P30281	292 aa	Predicted RBP	18.19	■□□□□ 0.5
MUC1-214	ENST00000462317	MAPK4	P31152	587 aa		18.19	■□□□□ 0.5
MUC1-214	ENST00000462317	ERVK-9	P63128	1117 aa		18.19	■□□□□ 0.5
MUC1-214	ENST00000462317	ERVK-24	P63145	666 aa		18.19	■□□□□ 0.5
MUC1-214	ENST00000462317	DYNLL1	P63167	89 aa	Known RBP	18.19	■□□□□ 0.5
MUC1-214	ENST00000462317	OS9	Q13438	667 aa	Predicted RBP	18.19	■□□□□ 0.5
MUC1-214	ENST00000462317	PDE3A	Q14432	1141 aa		18.19	■□□□□ 0.5
MUC1-214	ENST00000462317	TNNI3K	Q59H18	835 aa		18.19	■□□□□ 0.5
MUC1-214	ENST00000462317	METTL16	Q86W50	562 aa	Known RBP	18.19	■□□□□ 0.5
MUC1-214	ENST00000462317	SOCS4	Q8WXH5	440 aa		18.19	■□□□□ 0.5
MUC1-214	ENST00000462317	PIH1D3	Q9NQM4	214 aa	Known RBP	18.19	■□□□□ 0.5
MUC1-214	ENST00000462317	NDUFB9	Q9Y6M9	179 aa		18.19	■□□□□ 0.5
MUC1-214	ENST00000462317	FPGT-TNNI3K	V9GXZ4	949 aa		18.19	■□□□□ 0.5
MUC1-214	ENST00000462317	LAMA3	Q16787	3333 aa		18.19	■□□□□ 0.5
MUC1-214	ENST00000462317	PFAS	O15067	1338 aa		18.19	■□□□□ 0.5
MUC1-214	ENST00000462317	ZAP70	P43403	619 aa		18.18	■□□□□ 0.5
MUC1-214	ENST00000462317	ZYX	Q15942	572 aa	Known RBP	18.18	■□□□□ 0.5
MUC1-214	ENST00000462317	ATF7IP	Q6VMQ6	1270 aa		18.18	■□□□□ 0.5
MUC1-214	ENST00000462317	GPR142	Q7Z601	462 aa		18.18	■□□□□ 0.5
MUC1-214	ENST00000462317	USP6NL	Q92738	828 aa		18.18	■□□□□ 0.5
MUC1-214	ENST00000462317	UBE2O	Q9C0C9	1292 aa	Known RBP	18.18	■□□□□ 0.5
MUC1-214	ENST00000462317	DOCK3	Q8IZD9	2030 aa		18.17	■□□□□ 0.5
MUC1-214	ENST00000462317	GH2	P01242	217 aa		18.17	■□□□□ 0.5
MUC1-214	ENST00000462317	MORN1	Q5T089	497 aa		18.17	■□□□□ 0.5
MUC1-214	ENST00000462317	LHX8	Q68G74	356 aa		18.17	■□□□□ 0.5
MUC1-214	ENST00000462317	PLEKHH3	Q7Z736	793 aa		18.17	■□□□□ 0.5
MUC1-214	ENST00000462317	TDH	Q8IZJ6	230 aa		18.17	■□□□□ 0.5
MUC1-214	ENST00000462317	CWC22	Q9HCG8	908 aa	Known RBP	18.17	■□□□□ 0.5
MUC1-214	ENST00000462317	SURF6	O75683	361 aa	Known RBP	18.16	■□□□□ 0.5
MUC1-214	ENST00000462317	HLA-DOA	P06340	250 aa		18.16	■□□□□ 0.5
MUC1-214	ENST00000462317	CYP7A1	P22680	504 aa		18.16	■□□□□ 0.5
MUC1-214	ENST00000462317	RGS2	P41220	211 aa		18.16	■□□□□ 0.5
MUC1-214	ENST00000462317	LRRC26	Q2I0M4	334 aa		18.16	■□□□□ 0.5
MUC1-214	ENST00000462317	LRIT3	Q3SXY7	679 aa		18.16	■□□□□ 0.5
MUC1-214	ENST00000462317	USP17L2	Q6R6M4	530 aa		18.16	■□□□□ 0.5
MUC1-214	ENST00000462317	TRMT44	Q8IYL2	757 aa	Known RBP	18.16	■□□□□ 0.5
MUC1-214	ENST00000462317	GPR108	Q9NPR9	543 aa		18.16	■□□□□ 0.5
MUC1-214	ENST00000462317	COL6A3	P12111	3177 aa		18.16	■□□□□ 0.5
MUC1-214	ENST00000462317	LOC285556	D6RIA3	1793 aa		18.15	■□□□□ 0.5
MUC1-214	ENST00000462317	COL6A1	P12109	1028 aa		18.15	■□□□□ 0.5
MUC1-214	ENST00000462317	MDM2	Q00987	491 aa	Predicted RBP	18.15	■□□□□ 0.5
MUC1-214	ENST00000462317	POLA2	Q14181	598 aa		18.15	■□□□□ 0.5
MUC1-214	ENST00000462317	WDR78	Q5VTH9	848 aa		18.15	■□□□□ 0.5
MUC1-214	ENST00000462317	GPR153	Q6NV75	609 aa		18.15	■□□□□ 0.5
MUC1-214	ENST00000462317	TMEM57	Q8N5G2	664 aa		18.15	■□□□□ 0.5
MUC1-214	ENST00000462317	MIGA1	Q8NAN2	632 aa		18.15	■□□□□ 0.5
MUC1-214	ENST00000462317	GINM1	Q9NU53	330 aa		18.15	■□□□□ 0.5
MUC1-214	ENST00000462317	IDH1	O75874	414 aa	Known RBP	18.14	■□□□□ 0.49
MUC1-214	ENST00000462317	ATP8B2	P98198	1209 aa		18.14	■□□□□ 0.49
MUC1-214	ENST00000462317	EDC3	Q96F86	508 aa	Known RBP	18.14	■□□□□ 0.49
MUC1-214	ENST00000462317	FEZ1	Q99689	392 aa		18.14	■□□□□ 0.49
MUC1-214	ENST00000462317	APBA2	Q99767	749 aa		18.14	■□□□□ 0.49
MUC1-214	ENST00000462317	CCDC8	Q9H0W5	538 aa	Predicted RBP	18.14	■□□□□ 0.49
MUC1-214	ENST00000462317	C1orf115	Q9H7X2	142 aa		18.14	■□□□□ 0.49
MUC1-214	ENST00000462317	TLR7	Q9NYK1	1049 aa	Known RBP	18.14	■□□□□ 0.49
MUC1-214	ENST00000462317	USP17L15	C9J2P7	530 aa		18.13	■□□□□ 0.49
MUC1-214	ENST00000462317	USP17L13	C9JLJ4	530 aa		18.13	■□□□□ 0.49
MUC1-214	ENST00000462317	USP17L11	C9JVI0	530 aa		18.13	■□□□□ 0.49
MUC1-214	ENST00000462317	USP17L18	D6R9N7	530 aa		18.13	■□□□□ 0.49
MUC1-214	ENST00000462317	USP17L22	D6RA61	530 aa		18.13	■□□□□ 0.49
MUC1-214	ENST00000462317	USP17L17	D6RBQ6	530 aa		18.13	■□□□□ 0.49
MUC1-214	ENST00000462317	USP17L19	D6RCP7	530 aa		18.13	■□□□□ 0.49
MUC1-214	ENST00000462317	USP17L20	D6RJB6	530 aa		18.13	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms