RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 C8orf86Q6ZUL3 223 aa7.29□□□□□ -1.24
COPS3-204ENST00000462236 HS2ST1Q7LGA3 356 aa7.29□□□□□ -1.24
COPS3-204ENST00000462236 PODNQ7Z5L7 613 aa7.29□□□□□ -1.24
COPS3-204ENST00000462236 RSRP1Q9BUV0 290 aa7.29□□□□□ -1.24
COPS3-204ENST00000462236 NOP53Q9NZM5 478 aaKnown RBP7.29□□□□□ -1.24
COPS3-204ENST00000462236 UTRNP46939 3433 aa7.29□□□□□ -1.24
COPS3-204ENST00000462236 FMN2Q9NZ56 1722 aa7.28□□□□□ -1.24
COPS3-204ENST00000462236 FSCN2O14926 492 aa7.28□□□□□ -1.24
COPS3-204ENST00000462236 RPS26P62854 115 aaKnown RBP7.28□□□□□ -1.24
COPS3-204ENST00000462236 RAC1P63000 192 aa7.28□□□□□ -1.24
COPS3-204ENST00000462236 C19orf57Q0VDD7 668 aa7.28□□□□□ -1.24
COPS3-204ENST00000462236 FAAP100Q0VG06 881 aa7.28□□□□□ -1.24
COPS3-204ENST00000462236 AP3B2Q13367 1082 aa7.28□□□□□ -1.24
COPS3-204ENST00000462236 DEFB132Q7Z7B7 95 aa7.28□□□□□ -1.24
COPS3-204ENST00000462236 BEND7Q8N7W2 519 aaPredicted RBP7.28□□□□□ -1.24
COPS3-204ENST00000462236 ORAI2Q96SN7 254 aa7.28□□□□□ -1.24
COPS3-204ENST00000462236 KNDC1Q76NI1 1749 aa7.27□□□□□ -1.25
COPS3-204ENST00000462236 LINC01387J3KSC0 135 aa7.27□□□□□ -1.25
COPS3-204ENST00000462236 SOX1O00570 391 aaPredicted RBP7.27□□□□□ -1.25
COPS3-204ENST00000462236 HNRNPUQ00839 825 aaKnown RBP eCLIP7.27□□□□□ -1.25
COPS3-204ENST00000462236 TRAPPC3LQ5T215 181 aa7.27□□□□□ -1.25
COPS3-204ENST00000462236 TPTE2Q6XPS3 522 aa7.27□□□□□ -1.25
COPS3-204ENST00000462236 ERMP1Q7Z2K6 904 aa7.27□□□□□ -1.25
COPS3-204ENST00000462236 ALYREFQ86V81 257 aaKnown RBP7.27□□□□□ -1.25
COPS3-204ENST00000462236 DMRTC2Q8IXT2 367 aaPredicted RBP7.27□□□□□ -1.25
COPS3-204ENST00000462236 EMILIN2Q9BXX0 1053 aa7.27□□□□□ -1.25
COPS3-204ENST00000462236 GPN3Q9UHW5 284 aaPredicted RBP7.27□□□□□ -1.25
COPS3-204ENST00000462236 ROBO2Q9HCK4 1378 aa7.27□□□□□ -1.25
COPS3-204ENST00000462236 KIF1AQ12756 1690 aa7.27□□□□□ -1.25
COPS3-204ENST00000462236 RREB1Q92766 1687 aa7.27□□□□□ -1.25
COPS3-204ENST00000462236 ROCK1Q13464 1354 aa7.26□□□□□ -1.25
COPS3-204ENST00000462236 FAM181BA6NEQ2 426 aa7.26□□□□□ -1.25
COPS3-204ENST00000462236 ENC1O14682 589 aa7.26□□□□□ -1.25
COPS3-204ENST00000462236 CYP11A1P05108 521 aa7.26□□□□□ -1.25
COPS3-204ENST00000462236 NME2P22392 152 aa7.26□□□□□ -1.25
COPS3-204ENST00000462236 HDLBPQ00341 1268 aaKnown RBP7.26□□□□□ -1.25
COPS3-204ENST00000462236 SUZ12Q15022 739 aaKnown RBP7.26□□□□□ -1.25
COPS3-204ENST00000462236 SETDB1Q15047 1291 aa7.26□□□□□ -1.25
COPS3-204ENST00000462236 METTL16Q86W50 562 aaKnown RBP7.26□□□□□ -1.25
COPS3-204ENST00000462236 FBXO11Q86XK2 927 aa7.26□□□□□ -1.25
COPS3-204ENST00000462236 SCARF2Q96GP6 870 aaPredicted RBP7.26□□□□□ -1.25
COPS3-204ENST00000462236 IFT172Q9UG01 1749 aa7.26□□□□□ -1.25
COPS3-204ENST00000462236 CRYBG1Q9Y4K1 1723 aa7.26□□□□□ -1.25
COPS3-204ENST00000462236 DISP2A7MBM2 1401 aa7.26□□□□□ -1.25
COPS3-204ENST00000462236 A0A0A0MRY4 1105 aa7.25□□□□□ -1.25
COPS3-204ENST00000462236 SNRPNP63162 240 aaKnown RBP7.25□□□□□ -1.25
COPS3-204ENST00000462236 LRRC14Q15048 493 aa7.25□□□□□ -1.25
COPS3-204ENST00000462236 HP1BP3Q5SSJ5 553 aaPredicted RBP7.25□□□□□ -1.25
COPS3-204ENST00000462236 RELL1Q8IUW5 271 aa7.25□□□□□ -1.25
COPS3-204ENST00000462236 UNC5CLQ8IV45 518 aa7.25□□□□□ -1.25
COPS3-204ENST00000462236 FMR1NBQ8N0W7 255 aaPredicted RBP7.25□□□□□ -1.25
COPS3-204ENST00000462236 TRIM11Q96F44 468 aa7.25□□□□□ -1.25
COPS3-204ENST00000462236 PLVAPQ9BX97 442 aa7.25□□□□□ -1.25
COPS3-204ENST00000462236 GGT7Q9UJ14 662 aa7.25□□□□□ -1.25
COPS3-204ENST00000462236 CYP8B1Q9UNU6 501 aa7.25□□□□□ -1.25
COPS3-204ENST00000462236 ADAMTS8Q9UP79 889 aa7.25□□□□□ -1.25
COPS3-204ENST00000462236 HFM1A2PYH4 1435 aa7.25□□□□□ -1.25
COPS3-204ENST00000462236 THSD7AQ9UPZ6 1657 aa7.25□□□□□ -1.25
COPS3-204ENST00000462236 NUP188Q5SRE5 1749 aa7.24□□□□□ -1.25
COPS3-204ENST00000462236 TM4SF5O14894 197 aa7.24□□□□□ -1.25
COPS3-204ENST00000462236 ARNTP27540 789 aa7.24□□□□□ -1.25
COPS3-204ENST00000462236 TRIM28Q13263 835 aaKnown RBP7.24□□□□□ -1.25
COPS3-204ENST00000462236 TGIF2Q9GZN2 237 aa7.24□□□□□ -1.25
COPS3-204ENST00000462236 NPHP3Q7Z494 1330 aa7.24□□□□□ -1.25
COPS3-204ENST00000462236 ELNP15502 786 aa7.23□□□□□ -1.25
COPS3-204ENST00000462236 CD68P34810 354 aaPredicted RBP7.23□□□□□ -1.25
COPS3-204ENST00000462236 GSTM4Q03013 218 aa7.23□□□□□ -1.25
COPS3-204ENST00000462236 PRRT3Q5FWE3 981 aa7.23□□□□□ -1.25
COPS3-204ENST00000462236 DIEXFQ68CQ4 756 aaKnown RBP7.23□□□□□ -1.25
COPS3-204ENST00000462236 AGMOQ6ZNB7 445 aa7.23□□□□□ -1.25
COPS3-204ENST00000462236 CCDC84Q86UT8 332 aaPredicted RBP7.23□□□□□ -1.25
COPS3-204ENST00000462236 SLC7A3Q8WY07 619 aa7.23□□□□□ -1.25
COPS3-204ENST00000462236 TMEM74Q96NL1 305 aa7.23□□□□□ -1.25
COPS3-204ENST00000462236 NRSN2Q9GZP1 204 aa7.23□□□□□ -1.25
COPS3-204ENST00000462236 TRPM3Q9HCF6 1732 aaPredicted RBP7.23□□□□□ -1.25
COPS3-204ENST00000462236 ALS2Q96Q42 1657 aa7.22□□□□□ -1.25
COPS3-204ENST00000462236 TECPR2O15040 1411 aa7.22□□□□□ -1.25
COPS3-204ENST00000462236 DLL1O00548 723 aa7.22□□□□□ -1.25
COPS3-204ENST00000462236 DEAF1O75398 565 aaPredicted RBP7.22□□□□□ -1.25
COPS3-204ENST00000462236 FBXO24O75426 580 aa7.22□□□□□ -1.25
COPS3-204ENST00000462236 CELA3AP09093 270 aa7.22□□□□□ -1.25
COPS3-204ENST00000462236 BMP6P22004 513 aa7.22□□□□□ -1.25
COPS3-204ENST00000462236 LIG3P49916 1009 aa7.22□□□□□ -1.25
COPS3-204ENST00000462236 VPS72Q15906 364 aa7.22□□□□□ -1.25
COPS3-204ENST00000462236 TTBK2Q6IQ55 1244 aa7.22□□□□□ -1.25
COPS3-204ENST00000462236 NT5DC4Q86YG4 428 aa7.22□□□□□ -1.25
COPS3-204ENST00000462236 SULF2Q8IWU5 870 aa7.22□□□□□ -1.25
COPS3-204ENST00000462236 ZNF654Q8IZM8 581 aa7.22□□□□□ -1.25
COPS3-204ENST00000462236 KRT82Q9NSB4 513 aa7.22□□□□□ -1.25
COPS3-204ENST00000462236 DDX41Q9UJV9 622 aaKnown RBP7.22□□□□□ -1.25
COPS3-204ENST00000462236 SPATA31A3Q5VYP0 1347 aa7.22□□□□□ -1.25
COPS3-204ENST00000462236 SBF2Q86WG5 1849 aa7.22□□□□□ -1.25
COPS3-204ENST00000462236 NUP155O75694 1391 aa7.21□□□□□ -1.25
COPS3-204ENST00000462236 SPATA31C1P0DKV0 1188 aa7.21□□□□□ -1.26
COPS3-204ENST00000462236 ZNF252P-AS1Q0IIN9 211 aa7.21□□□□□ -1.26
COPS3-204ENST00000462236 POU4F3Q15319 338 aa7.21□□□□□ -1.26
COPS3-204ENST00000462236 PCNX4Q63HM2 1172 aa7.21□□□□□ -1.26
COPS3-204ENST00000462236 TXNDC11Q6PKC3 985 aa7.21□□□□□ -1.26
COPS3-204ENST00000462236 IGF2-ASQ6U949 168 aa7.21□□□□□ -1.26
COPS3-204ENST00000462236 USP48Q86UV5 1035 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms