RNA–Protein interactions for RNA: ENST00000462226.1

SPIRE1-207, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 4

Gene SPIRE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-207ENST00000462226 C11orf16Q9NQ32 467 aa9.36□□□□□ -0.91
SPIRE1-207ENST00000462226 KCNH4Q9UQ05 1017 aa9.36□□□□□ -0.91
SPIRE1-207ENST00000462226 USTQ9Y2C2 406 aa9.36□□□□□ -0.91
SPIRE1-207ENST00000462226 LRRFIP2Q9Y608 721 aaKnown RBP9.36□□□□□ -0.91
SPIRE1-207ENST00000462226 LAMB4A4D0S4 1761 aa9.36□□□□□ -0.91
SPIRE1-207ENST00000462226 IBTKQ9P2D0 1353 aaPredicted RBP9.36□□□□□ -0.91
SPIRE1-207ENST00000462226 PRAMEF22A3QJZ6 481 aa9.35□□□□□ -0.91
SPIRE1-207ENST00000462226 PDE4CQ08493 712 aa9.35□□□□□ -0.91
SPIRE1-207ENST00000462226 DGKZQ13574 1117 aa9.35□□□□□ -0.91
SPIRE1-207ENST00000462226 PROSER3Q2NL68 480 aa9.35□□□□□ -0.91
SPIRE1-207ENST00000462226 ZNF496Q96IT1 587 aaPredicted RBP9.35□□□□□ -0.91
SPIRE1-207ENST00000462226 SHANK3Q9BYB0 1731 aa9.35□□□□□ -0.91
SPIRE1-207ENST00000462226 MAP3K2Q9Y2U5 619 aa9.35□□□□□ -0.91
SPIRE1-207ENST00000462226 PALLDQ8WX93 1383 aa9.35□□□□□ -0.91
SPIRE1-207ENST00000462226 PAPPAQ13219 1627 aa9.34□□□□□ -0.91
SPIRE1-207ENST00000462226 TMEM88BA6NKF7 163 aa9.34□□□□□ -0.91
SPIRE1-207ENST00000462226 TXNRD1Q16881 649 aa9.34□□□□□ -0.91
SPIRE1-207ENST00000462226 TTC22Q5TAA0 569 aa9.34□□□□□ -0.91
SPIRE1-207ENST00000462226 C16orf46Q6P387 395 aa9.34□□□□□ -0.91
SPIRE1-207ENST00000462226 CCNL1Q9UK58 526 aaPredicted RBP9.34□□□□□ -0.91
SPIRE1-207ENST00000462226 NHSQ6T4R5 1651 aa9.34□□□□□ -0.91
SPIRE1-207ENST00000462226 UBR2Q8IWV8 1755 aa9.33□□□□□ -0.92
SPIRE1-207ENST00000462226 PNMA6EA0A0J9YXQ4 647 aa9.33□□□□□ -0.92
SPIRE1-207ENST00000462226 RNF225M0QZC1 329 aaPredicted RBP9.33□□□□□ -0.92
SPIRE1-207ENST00000462226 RAB11FIP3O75154 756 aa9.33□□□□□ -0.92
SPIRE1-207ENST00000462226 CDC45O75419 566 aa9.33□□□□□ -0.92
SPIRE1-207ENST00000462226 MFAP1P55081 439 aaKnown RBP9.33□□□□□ -0.92
SPIRE1-207ENST00000462226 NEXNQ0ZGT2 675 aa9.33□□□□□ -0.92
SPIRE1-207ENST00000462226 SFSWAPQ12872 951 aaKnown RBP9.33□□□□□ -0.92
SPIRE1-207ENST00000462226 BECN1Q14457 450 aa9.33□□□□□ -0.92
SPIRE1-207ENST00000462226 LINS1Q8NG48 757 aa9.33□□□□□ -0.92
SPIRE1-207ENST00000462226 SSH3Q8TE77 659 aa9.33□□□□□ -0.92
SPIRE1-207ENST00000462226 ARID3AQ99856 593 aa9.33□□□□□ -0.92
SPIRE1-207ENST00000462226 LRRCC1Q9C099 1032 aa9.33□□□□□ -0.92
SPIRE1-207ENST00000462226 KLK14Q9P0G3 267 aa9.33□□□□□ -0.92
SPIRE1-207ENST00000462226 DMGDHQ9UI17 866 aaKnown RBP9.33□□□□□ -0.92
SPIRE1-207ENST00000462226 GGA1Q9UJY5 639 aa9.33□□□□□ -0.92
SPIRE1-207ENST00000462226 HCN2Q9UL51 889 aa9.33□□□□□ -0.92
SPIRE1-207ENST00000462226 TNS1Q9HBL0 1735 aaKnown RBP9.33□□□□□ -0.92
SPIRE1-207ENST00000462226 KCPQ6ZWJ8 1503 aa9.32□□□□□ -0.92
SPIRE1-207ENST00000462226 DOT1LQ8TEK3 1739 aa9.32□□□□□ -0.92
SPIRE1-207ENST00000462226 SMARCA5O60264 1052 aaPredicted RBP9.32□□□□□ -0.92
SPIRE1-207ENST00000462226 MYL6BP14649 208 aa9.32□□□□□ -0.92
SPIRE1-207ENST00000462226 GSPT1P15170 499 aaKnown RBP9.32□□□□□ -0.92
SPIRE1-207ENST00000462226 BRD2P25440 801 aaKnown RBP9.32□□□□□ -0.92
SPIRE1-207ENST00000462226 HMGB2P26583 209 aaKnown RBP9.32□□□□□ -0.92
SPIRE1-207ENST00000462226 SPEM2Q0P670 501 aa9.32□□□□□ -0.92
SPIRE1-207ENST00000462226 AIMP1Q12904 312 aaKnown RBP9.32□□□□□ -0.92
SPIRE1-207ENST00000462226 HSP90AB4PQ58FF6 505 aa9.32□□□□□ -0.92
SPIRE1-207ENST00000462226 COX20Q5RI15 118 aa9.32□□□□□ -0.92
SPIRE1-207ENST00000462226 NEDD1Q8NHV4 660 aa9.32□□□□□ -0.92
SPIRE1-207ENST00000462226 XAGE3Q8WTP9 111 aa9.32□□□□□ -0.92
SPIRE1-207ENST00000462226 IFT43Q96FT9 208 aa9.32□□□□□ -0.92
SPIRE1-207ENST00000462226 C22orf23Q9BZE7 217 aa9.32□□□□□ -0.92
SPIRE1-207ENST00000462226 STK32BQ9NY57 414 aa9.32□□□□□ -0.92
SPIRE1-207ENST00000462226 C9orf78Q9NZ63 289 aaPredicted RBP9.32□□□□□ -0.92
SPIRE1-207ENST00000462226 ASAP1Q9ULH1 1129 aa9.32□□□□□ -0.92
SPIRE1-207ENST00000462226 BCS1LQ9Y276 419 aa9.32□□□□□ -0.92
SPIRE1-207ENST00000462226 EXOC6BQ9Y2D4 811 aa9.32□□□□□ -0.92
SPIRE1-207ENST00000462226 LOC102724428A0A0B4J2F2 783 aa9.31□□□□□ -0.92
SPIRE1-207ENST00000462226 SIN3BO75182 1162 aa9.31□□□□□ -0.92
SPIRE1-207ENST00000462226 NBPF7P0C2Y1 421 aaPredicted RBP9.31□□□□□ -0.92
SPIRE1-207ENST00000462226 ARSDP51689 593 aa9.31□□□□□ -0.92
SPIRE1-207ENST00000462226 MARSP56192 900 aaKnown RBP9.31□□□□□ -0.92
SPIRE1-207ENST00000462226 SIK1P57059 783 aa9.31□□□□□ -0.92
SPIRE1-207ENST00000462226 MTX1Q13505 466 aa9.31□□□□□ -0.92
SPIRE1-207ENST00000462226 R3HDM1Q15032 1099 aaKnown RBP9.31□□□□□ -0.92
SPIRE1-207ENST00000462226 CASC1Q6TDU7 716 aa9.31□□□□□ -0.92
SPIRE1-207ENST00000462226 COPS6Q7L5N1 327 aa9.31□□□□□ -0.92
SPIRE1-207ENST00000462226 PPP1R42Q7Z4L9 355 aa9.31□□□□□ -0.92
SPIRE1-207ENST00000462226 C16orf71Q8IYS4 520 aaPredicted RBP9.31□□□□□ -0.92
SPIRE1-207ENST00000462226 GALNT6Q8NCL4 622 aa9.31□□□□□ -0.92
SPIRE1-207ENST00000462226 EDARADDQ8WWZ3 215 aa9.31□□□□□ -0.92
SPIRE1-207ENST00000462226 LRFN2Q9ULH4 789 aa9.31□□□□□ -0.92
SPIRE1-207ENST00000462226 MTMR7Q9Y216 660 aa9.31□□□□□ -0.92
SPIRE1-207ENST00000462226 USP16Q9Y5T5 823 aa9.31□□□□□ -0.92
SPIRE1-207ENST00000462226 DNMT3AQ9Y6K1 912 aaPredicted RBP9.31□□□□□ -0.92
SPIRE1-207ENST00000462226 TOGARAM1Q9Y4F4 1720 aa9.31□□□□□ -0.92
SPIRE1-207ENST00000462226 UTYO14607 1347 aa9.31□□□□□ -0.92
SPIRE1-207ENST00000462226 AOX1Q06278 1338 aa9.31□□□□□ -0.92
SPIRE1-207ENST00000462226 GRM8O00222 908 aa9.3□□□□□ -0.92
SPIRE1-207ENST00000462226 SRGAP3O43295 1099 aa9.3□□□□□ -0.92
SPIRE1-207ENST00000462226 MICAL2O94851 1124 aa9.3□□□□□ -0.92
SPIRE1-207ENST00000462226 EPXP11678 715 aa9.3□□□□□ -0.92
SPIRE1-207ENST00000462226 IDH3AP50213 366 aa9.3□□□□□ -0.92
SPIRE1-207ENST00000462226 LRP10Q7Z4F1 713 aa9.3□□□□□ -0.92
SPIRE1-207ENST00000462226 OTUD7AQ8TE49 926 aaPredicted RBP9.3□□□□□ -0.92
SPIRE1-207ENST00000462226 KIF1BPQ96EK5 621 aa9.3□□□□□ -0.92
SPIRE1-207ENST00000462226 SCARF2Q96GP6 870 aaPredicted RBP9.3□□□□□ -0.92
SPIRE1-207ENST00000462226 METTL22Q9BUU2 404 aaPredicted RBP9.3□□□□□ -0.92
SPIRE1-207ENST00000462226 ATG3Q9NT62 314 aa9.3□□□□□ -0.92
SPIRE1-207ENST00000462226 SALL3Q9BXA9 1300 aa9.3□□□□□ -0.92
SPIRE1-207ENST00000462226 NEURL1BA8MQ27 555 aa9.29□□□□□ -0.92
SPIRE1-207ENST00000462226 SURF6O75683 361 aaKnown RBP9.29□□□□□ -0.92
SPIRE1-207ENST00000462226 MX1P20591 662 aa9.29□□□□□ -0.92
SPIRE1-207ENST00000462226 SSFA2P28290 1259 aa9.29□□□□□ -0.92
SPIRE1-207ENST00000462226 INPP5BP32019 993 aa9.29□□□□□ -0.92
SPIRE1-207ENST00000462226 RBM25P49756 843 aaKnown RBP9.29□□□□□ -0.92
SPIRE1-207ENST00000462226 PDE1AP54750 535 aa9.29□□□□□ -0.92
SPIRE1-207ENST00000462226 CWF19L2Q2TBE0 894 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms