RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 HDGFL1Q5TGJ6 251 aa7.49□□□□□ -1.21
SMARCC1-204ENST00000462198 PADI6Q6TGC4 694 aa7.49□□□□□ -1.21
SMARCC1-204ENST00000462198 ERO1BQ86YB8 467 aa7.49□□□□□ -1.21
SMARCC1-204ENST00000462198 TSPYL6Q8N831 410 aa7.49□□□□□ -1.21
SMARCC1-204ENST00000462198 ANKLE1Q8NAG6 615 aa7.49□□□□□ -1.21
SMARCC1-204ENST00000462198 PLBD2Q8NHP8 589 aa7.49□□□□□ -1.21
SMARCC1-204ENST00000462198 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.49□□□□□ -1.21
SMARCC1-204ENST00000462198 GLMNQ92990 594 aa7.49□□□□□ -1.21
SMARCC1-204ENST00000462198 SNX27Q96L92 541 aa7.49□□□□□ -1.21
SMARCC1-204ENST00000462198 CHMP4AQ9BY43 222 aa7.49□□□□□ -1.21
SMARCC1-204ENST00000462198 C11orf49Q9H6J7 331 aa7.49□□□□□ -1.21
SMARCC1-204ENST00000462198 KIAA1468Q9P260 1216 aa7.49□□□□□ -1.21
SMARCC1-204ENST00000462198 MINPP1Q9UNW1 487 aa7.49□□□□□ -1.21
SMARCC1-204ENST00000462198 AOX1Q06278 1338 aa7.49□□□□□ -1.21
SMARCC1-204ENST00000462198 POM121CA8CG34 1229 aa7.48□□□□□ -1.21
SMARCC1-204ENST00000462198 PATL2C9JE40 543 aaKnown RBP7.48□□□□□ -1.21
SMARCC1-204ENST00000462198 PDHXO00330 501 aa7.48□□□□□ -1.21
SMARCC1-204ENST00000462198 HSP90B1P14625 803 aaKnown RBP7.48□□□□□ -1.21
SMARCC1-204ENST00000462198 FOSL2P15408 326 aa7.48□□□□□ -1.21
SMARCC1-204ENST00000462198 RBM5P52756 815 aaKnown RBP eCLIP7.48□□□□□ -1.21
SMARCC1-204ENST00000462198 FGD1P98174 961 aa7.48□□□□□ -1.21
SMARCC1-204ENST00000462198 TRIM28Q13263 835 aaKnown RBP7.48□□□□□ -1.21
SMARCC1-204ENST00000462198 CCDC30Q5VVM6 783 aa7.48□□□□□ -1.21
SMARCC1-204ENST00000462198 CERS5Q8N5B7 392 aa7.48□□□□□ -1.21
SMARCC1-204ENST00000462198 CCDC136Q96JN2 1154 aa7.48□□□□□ -1.21
SMARCC1-204ENST00000462198 TEPSINQ96N21 525 aa7.48□□□□□ -1.21
SMARCC1-204ENST00000462198 CHPF2Q9P2E5 772 aa7.48□□□□□ -1.21
SMARCC1-204ENST00000462198 DBF4Q9UBU7 674 aaPredicted RBP7.48□□□□□ -1.21
SMARCC1-204ENST00000462198 ADGRA2Q96PE1 1338 aa7.48□□□□□ -1.21
SMARCC1-204ENST00000462198 SPTLC1O15269 473 aa7.47□□□□□ -1.21
SMARCC1-204ENST00000462198 PDE8AO60658 829 aa7.47□□□□□ -1.21
SMARCC1-204ENST00000462198 TNFAIP1Q13829 316 aa7.47□□□□□ -1.21
SMARCC1-204ENST00000462198 RIC3Q7Z5B4 369 aa7.47□□□□□ -1.21
SMARCC1-204ENST00000462198 ANKRD23Q86SG2 305 aa7.47□□□□□ -1.21
SMARCC1-204ENST00000462198 ZBTB38Q8NAP3 1195 aaPredicted RBP7.47□□□□□ -1.21
SMARCC1-204ENST00000462198 JARID2Q92833 1246 aaPredicted RBP7.47□□□□□ -1.21
SMARCC1-204ENST00000462198 ZKSCAN4Q969J2 545 aaPredicted RBP7.47□□□□□ -1.21
SMARCC1-204ENST00000462198 STK31Q9BXU1 1019 aa7.47□□□□□ -1.21
SMARCC1-204ENST00000462198 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.47□□□□□ -1.21
SMARCC1-204ENST00000462198 BSDC1Q9NW68 430 aaPredicted RBP7.47□□□□□ -1.21
SMARCC1-204ENST00000462198 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.47□□□□□ -1.21
SMARCC1-204ENST00000462198 ZNF70Q9UC06 446 aaPredicted RBP7.47□□□□□ -1.21
SMARCC1-204ENST00000462198 LEMD3Q9Y2U8 911 aa7.47□□□□□ -1.21
SMARCC1-204ENST00000462198 SNCAIPQ9Y6H5 919 aa7.47□□□□□ -1.21
SMARCC1-204ENST00000462198 VAMP4O75379 141 aa7.46□□□□□ -1.22
SMARCC1-204ENST00000462198 BCRP11274 1271 aa7.46□□□□□ -1.22
SMARCC1-204ENST00000462198 KLRK1P26718 216 aa7.46□□□□□ -1.22
SMARCC1-204ENST00000462198 KCNA1Q09470 495 aa7.46□□□□□ -1.22
SMARCC1-204ENST00000462198 PPIL2Q13356 520 aa7.46□□□□□ -1.22
SMARCC1-204ENST00000462198 ALYREFQ86V81 257 aaKnown RBP7.46□□□□□ -1.22
SMARCC1-204ENST00000462198 TRMT2AQ8IZ69 625 aaKnown RBP7.46□□□□□ -1.22
SMARCC1-204ENST00000462198 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.46□□□□□ -1.22
SMARCC1-204ENST00000462198 SPIRE2Q8WWL2 714 aa7.46□□□□□ -1.22
SMARCC1-204ENST00000462198 CDC5LQ99459 802 aaKnown RBP7.46□□□□□ -1.22
SMARCC1-204ENST00000462198 LBHD1Q9BQE6 289 aaPredicted RBP7.46□□□□□ -1.22
SMARCC1-204ENST00000462198 C1QTNF1Q9BXJ1 281 aa7.46□□□□□ -1.22
SMARCC1-204ENST00000462198 TMEM39BQ9GZU3 492 aa7.46□□□□□ -1.22
SMARCC1-204ENST00000462198 TTYH1Q9H313 450 aaPredicted RBP7.46□□□□□ -1.22
SMARCC1-204ENST00000462198 TDRD3Q9H7E2 651 aaKnown RBP7.46□□□□□ -1.22
SMARCC1-204ENST00000462198 CD209Q9NNX6 404 aa7.46□□□□□ -1.22
SMARCC1-204ENST00000462198 HYPKQ9NX55 129 aa7.46□□□□□ -1.22
SMARCC1-204ENST00000462198 COL2A1P02458 1487 aaPredicted RBP7.46□□□□□ -1.22
SMARCC1-204ENST00000462198 MYO9BQ13459 2157 aa7.45□□□□□ -1.22
SMARCC1-204ENST00000462198 TCP10L2B9ZVM9 353 aa7.45□□□□□ -1.22
SMARCC1-204ENST00000462198 BRD1O95696 1058 aa7.45□□□□□ -1.22
SMARCC1-204ENST00000462198 CYP2C8P10632 490 aa7.45□□□□□ -1.22
SMARCC1-204ENST00000462198 ABL2P42684 1182 aa7.45□□□□□ -1.22
SMARCC1-204ENST00000462198 PPATQ06203 517 aa7.45□□□□□ -1.22
SMARCC1-204ENST00000462198 FOXD4L5Q5VV16 416 aaPredicted RBP7.45□□□□□ -1.22
SMARCC1-204ENST00000462198 USP38Q8NB14 1042 aa7.45□□□□□ -1.22
SMARCC1-204ENST00000462198 FOXD4L4Q8WXT5 416 aaPredicted RBP7.45□□□□□ -1.22
SMARCC1-204ENST00000462198 PBXIP1Q96AQ6 731 aa7.45□□□□□ -1.22
SMARCC1-204ENST00000462198 SEPT9Q9UHD8 586 aaPredicted RBP7.45□□□□□ -1.22
SMARCC1-204ENST00000462198 USTQ9Y2C2 406 aa7.45□□□□□ -1.22
SMARCC1-204ENST00000462198 DDX60LQ5H9U9 1706 aaKnown RBP7.44□□□□□ -1.22
SMARCC1-204ENST00000462198 TNPO2O14787 897 aaKnown RBP7.44□□□□□ -1.22
SMARCC1-204ENST00000462198 PCCAP05165 728 aaPredicted RBP7.44□□□□□ -1.22
SMARCC1-204ENST00000462198 CT47B1P0C2W7 299 aaPredicted RBP7.44□□□□□ -1.22
SMARCC1-204ENST00000462198 TNNI2P48788 182 aa7.44□□□□□ -1.22
SMARCC1-204ENST00000462198 SHHQ15465 462 aa7.44□□□□□ -1.22
SMARCC1-204ENST00000462198 PPP1R18Q6NYC8 613 aa7.44□□□□□ -1.22
SMARCC1-204ENST00000462198 ADAMTS19Q8TE59 1207 aa7.44□□□□□ -1.22
SMARCC1-204ENST00000462198 ATXN2LQ8WWM7 1075 aaKnown RBP7.44□□□□□ -1.22
SMARCC1-204ENST00000462198 ASB2Q96Q27 587 aa7.44□□□□□ -1.22
SMARCC1-204ENST00000462198 WRNIP1Q96S55 665 aa7.44□□□□□ -1.22
SMARCC1-204ENST00000462198 HMX1Q9NP08 348 aaPredicted RBP7.44□□□□□ -1.22
SMARCC1-204ENST00000462198 PPP4R2Q9NY27 417 aa7.44□□□□□ -1.22
SMARCC1-204ENST00000462198 OGDHLQ9ULD0 1010 aa7.44□□□□□ -1.22
SMARCC1-204ENST00000462198 HCN4Q9Y3Q4 1203 aa7.44□□□□□ -1.22
SMARCC1-204ENST00000462198 PFASO15067 1338 aa7.44□□□□□ -1.22
SMARCC1-204ENST00000462198 TCF20Q9UGU0 1960 aaKnown RBP7.44□□□□□ -1.22
SMARCC1-204ENST00000462198 MUC6Q6W4X9 2439 aa7.43□□□□□ -1.22
SMARCC1-204ENST00000462198 SPEF2Q9C093 1822 aa7.43□□□□□ -1.22
SMARCC1-204ENST00000462198 LILRB3O75022 631 aa7.43□□□□□ -1.22
SMARCC1-204ENST00000462198 DDX58O95786 925 aaKnown RBP7.43□□□□□ -1.22
SMARCC1-204ENST00000462198 CD46P15529 392 aa7.43□□□□□ -1.22
SMARCC1-204ENST00000462198 FKBP1AP62942 108 aaKnown RBP7.43□□□□□ -1.22
SMARCC1-204ENST00000462198 MOGSQ13724 837 aa7.43□□□□□ -1.22
SMARCC1-204ENST00000462198 LRRC26Q2I0M4 334 aa7.43□□□□□ -1.22
SMARCC1-204ENST00000462198 COA7Q96BR5 231 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms