RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 ACSBG1Q96GR2 724 aa6.73□□□□□ -1.33
CCT4-203ENST00000461540 TEPSINQ96N21 525 aa6.73□□□□□ -1.33
CCT4-203ENST00000461540 CAPN6Q9Y6Q1 641 aa6.73□□□□□ -1.33
CCT4-203ENST00000461540 FZD6O60353 706 aa6.72□□□□□ -1.33
CCT4-203ENST00000461540 PPP1R15AO75807 674 aaPredicted RBP6.72□□□□□ -1.33
CCT4-203ENST00000461540 LRIG2O94898 1065 aa6.72□□□□□ -1.33
CCT4-203ENST00000461540 FAM13AO94988 1023 aa6.72□□□□□ -1.33
CCT4-203ENST00000461540 PI3P19957 117 aa6.72□□□□□ -1.33
CCT4-203ENST00000461540 SSFA2P28290 1259 aa6.72□□□□□ -1.33
CCT4-203ENST00000461540 AFF3P51826 1226 aaKnown RBP6.72□□□□□ -1.33
CCT4-203ENST00000461540 USPL1Q5W0Q7 1092 aa6.72□□□□□ -1.33
CCT4-203ENST00000461540 MAP1SQ66K74 1059 aaPredicted RBP6.72□□□□□ -1.33
CCT4-203ENST00000461540 SP8Q8IXZ3 490 aa6.72□□□□□ -1.33
CCT4-203ENST00000461540 KCT2Q8NC54 265 aa6.72□□□□□ -1.33
CCT4-203ENST00000461540 ADAMTS10Q9H324 1103 aa6.72□□□□□ -1.33
CCT4-203ENST00000461540 C19orf44Q9H6X5 657 aa6.72□□□□□ -1.33
CCT4-203ENST00000461540 TMEM39AQ9NV64 488 aa6.72□□□□□ -1.33
CCT4-203ENST00000461540 GPN3Q9UHW5 284 aaPredicted RBP6.72□□□□□ -1.33
CCT4-203ENST00000461540 CSADQ9Y600 493 aa6.72□□□□□ -1.33
CCT4-203ENST00000461540 TMEM238LA0A1B0GVL6 79 aa6.71□□□□□ -1.34
CCT4-203ENST00000461540 TMEM88BA6NKF7 163 aa6.71□□□□□ -1.34
CCT4-203ENST00000461540 SLITRK5O94991 958 aa6.71□□□□□ -1.34
CCT4-203ENST00000461540 NTF4P34130 210 aa6.71□□□□□ -1.34
CCT4-203ENST00000461540 PRPF40BQ6NWY9 871 aaKnown RBP6.71□□□□□ -1.34
CCT4-203ENST00000461540 LILRA2Q8N149 483 aa6.71□□□□□ -1.34
CCT4-203ENST00000461540 ZNF552Q9H707 407 aaPredicted RBP6.71□□□□□ -1.34
CCT4-203ENST00000461540 NPHS2Q9NP85 383 aa6.71□□□□□ -1.34
CCT4-203ENST00000461540 FANCGO15287 622 aa6.7□□□□□ -1.34
CCT4-203ENST00000461540 NEFLP07196 543 aa6.7□□□□□ -1.34
CCT4-203ENST00000461540 NPR3P17342 541 aa6.7□□□□□ -1.34
CCT4-203ENST00000461540 PDE6BP35913 854 aa6.7□□□□□ -1.34
CCT4-203ENST00000461540 TMPRSS7Q7RTY8 843 aa6.7□□□□□ -1.34
CCT4-203ENST00000461540 SULF2Q8IWU5 870 aa6.7□□□□□ -1.34
CCT4-203ENST00000461540 GPBAR1Q8TDU6 330 aa6.7□□□□□ -1.34
CCT4-203ENST00000461540 PANK1Q8TE04 598 aa6.7□□□□□ -1.34
CCT4-203ENST00000461540 INTS4Q96HW7 963 aaKnown RBP6.7□□□□□ -1.34
CCT4-203ENST00000461540 BDH2Q9BUT1 245 aa6.7□□□□□ -1.34
CCT4-203ENST00000461540 ADAM7Q9H2U9 754 aa6.7□□□□□ -1.34
CCT4-203ENST00000461540 CWC22Q9HCG8 908 aaKnown RBP6.7□□□□□ -1.34
CCT4-203ENST00000461540 CCDC87Q9NVE4 849 aa6.7□□□□□ -1.34
CCT4-203ENST00000461540 IRAK3Q9Y616 596 aa6.7□□□□□ -1.34
CCT4-203ENST00000461540 ZC3H12DA2A288 527 aaKnown RBP6.69□□□□□ -1.34
CCT4-203ENST00000461540 OXR1Q8N573 874 aa6.69□□□□□ -1.34
CCT4-203ENST00000461540 PDZD8Q8NEN9 1154 aa6.69□□□□□ -1.34
CCT4-203ENST00000461540 DACT3Q96B18 629 aaPredicted RBP6.69□□□□□ -1.34
CCT4-203ENST00000461540 SIGLEC10Q96LC7 697 aa6.69□□□□□ -1.34
CCT4-203ENST00000461540 PALD1Q9ULE6 856 aa6.69□□□□□ -1.34
CCT4-203ENST00000461540 MTMR7Q9Y216 660 aa6.69□□□□□ -1.34
CCT4-203ENST00000461540 SLC22A31A6NKX4 558 aa6.68□□□□□ -1.34
CCT4-203ENST00000461540 CBX7O95931 251 aa6.68□□□□□ -1.34
CCT4-203ENST00000461540 ESR1P03372 595 aa6.68□□□□□ -1.34
CCT4-203ENST00000461540 ARNTP27540 789 aa6.68□□□□□ -1.34
CCT4-203ENST00000461540 SRRDQ9UH36 339 aa6.68□□□□□ -1.34
CCT4-203ENST00000461540 TRAK1Q9UPV9 953 aa6.68□□□□□ -1.34
CCT4-203ENST00000461540 CARNS1A5YM72 827 aa6.67□□□□□ -1.34
CCT4-203ENST00000461540 DCDC2CA8MYV0 355 aa6.67□□□□□ -1.34
CCT4-203ENST00000461540 ZXDAP98168 799 aa6.67□□□□□ -1.34
CCT4-203ENST00000461540 ZBTB37Q5TC79 503 aa6.67□□□□□ -1.34
CCT4-203ENST00000461540 ZNF746Q6NUN9 644 aaPredicted RBP6.67□□□□□ -1.34
CCT4-203ENST00000461540 CREG2Q8IUH2 290 aa6.67□□□□□ -1.34
CCT4-203ENST00000461540 MIPEPQ99797 713 aa6.67□□□□□ -1.34
CCT4-203ENST00000461540 EMILIN2Q9BXX0 1053 aa6.67□□□□□ -1.34
CCT4-203ENST00000461540 SP110Q9HB58 689 aa6.67□□□□□ -1.34
CCT4-203ENST00000461540 YBX2Q9Y2T7 364 aaKnown RBP6.67□□□□□ -1.34
CCT4-203ENST00000461540 ADAMTS20P59510 1910 aa6.66□□□□□ -1.34
CCT4-203ENST00000461540 GADD45BO75293 160 aaPredicted RBP6.66□□□□□ -1.34
CCT4-203ENST00000461540 ABL1P00519 1130 aa6.66□□□□□ -1.34
CCT4-203ENST00000461540 FKBP4Q02790 459 aaKnown RBP eCLIP6.66□□□□□ -1.34
CCT4-203ENST00000461540 HHIPL2Q6UWX4 724 aa6.66□□□□□ -1.34
CCT4-203ENST00000461540 DTHD1Q6ZMT9 781 aa6.66□□□□□ -1.34
CCT4-203ENST00000461540 FRMD5Q7Z6J6 570 aa6.66□□□□□ -1.34
CCT4-203ENST00000461540 C12orf40Q86WS4 652 aa6.66□□□□□ -1.34
CCT4-203ENST00000461540 SYT8Q8NBV8 401 aa6.66□□□□□ -1.34
CCT4-203ENST00000461540 STK35Q8TDR2 534 aa6.66□□□□□ -1.34
CCT4-203ENST00000461540 C1orf115Q9H7X2 142 aa6.66□□□□□ -1.34
CCT4-203ENST00000461540 ANO2Q9NQ90 1003 aa6.66□□□□□ -1.34
CCT4-203ENST00000461540 FITM1A5D6W6 292 aa6.65□□□□□ -1.34
CCT4-203ENST00000461540 PHLDB3Q6NSJ2 640 aa6.65□□□□□ -1.34
CCT4-203ENST00000461540 ZNF507Q8TCN5 953 aa6.65□□□□□ -1.34
CCT4-203ENST00000461540 LUC7LQ9NQ29 371 aaKnown RBP6.65□□□□□ -1.34
CCT4-203ENST00000461540 CPNE3O75131 537 aaKnown RBP6.64□□□□□ -1.35
CCT4-203ENST00000461540 RING1Q06587 406 aa6.64□□□□□ -1.35
CCT4-203ENST00000461540 SF3B2Q13435 895 aaKnown RBP6.64□□□□□ -1.35
CCT4-203ENST00000461540 VMACQ2NL98 169 aa6.64□□□□□ -1.35
CCT4-203ENST00000461540 TIGD5Q53EQ6 642 aa6.64□□□□□ -1.35
CCT4-203ENST00000461540 CBX8Q9HC52 389 aa6.64□□□□□ -1.35
CCT4-203ENST00000461540 NME2P22392 152 aa6.63□□□□□ -1.35
CCT4-203ENST00000461540 KIR3DL1P43629 444 aa6.63□□□□□ -1.35
CCT4-203ENST00000461540 TNK2Q07912 1038 aa6.63□□□□□ -1.35
CCT4-203ENST00000461540 ZNF211Q13398 564 aaPredicted RBP6.63□□□□□ -1.35
CCT4-203ENST00000461540 MFSD2AQ8NA29 543 aa6.63□□□□□ -1.35
CCT4-203ENST00000461540 COX4I2Q96KJ9 171 aa6.63□□□□□ -1.35
CCT4-203ENST00000461540 ZGLP1P0C6A0 271 aa6.62□□□□□ -1.35
CCT4-203ENST00000461540 CYP7A1P22680 504 aa6.62□□□□□ -1.35
CCT4-203ENST00000461540 ZNF252P-AS1Q0IIN9 211 aa6.62□□□□□ -1.35
CCT4-203ENST00000461540 GRIN3BO60391 1043 aa6.61□□□□□ -1.35
CCT4-203ENST00000461540 TNFRSF1AP19438 455 aa6.61□□□□□ -1.35
CCT4-203ENST00000461540 SRSF3P84103 164 aaKnown RBP6.61□□□□□ -1.35
CCT4-203ENST00000461540 SNX17Q15036 470 aa6.61□□□□□ -1.35
CCT4-203ENST00000461540 NR0B2Q15466 257 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms