RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 ERICH6Q7L0X2 663 aa10.71□□□□□ -0.69
HDAC9-220ENST00000461409 ANKRD23Q86SG2 305 aa10.71□□□□□ -0.69
HDAC9-220ENST00000461409 ZSCAN29Q8IWY8 852 aaPredicted RBP10.71□□□□□ -0.69
HDAC9-220ENST00000461409 NEUROD6Q96NK8 337 aa10.71□□□□□ -0.69
HDAC9-220ENST00000461409 PICK1Q9NRD5 415 aa10.71□□□□□ -0.69
HDAC9-220ENST00000461409 RFX7Q2KHR2 1363 aa10.7□□□□□ -0.7
HDAC9-220ENST00000461409 MROH7-TTC4A0A0A0MT08 1334 aa10.7□□□□□ -0.7
HDAC9-220ENST00000461409 SMAPO00193 183 aa10.7□□□□□ -0.7
HDAC9-220ENST00000461409 BCAR3O75815 825 aa10.7□□□□□ -0.7
HDAC9-220ENST00000461409 MAP4K4O95819 1239 aaPredicted RBP10.7□□□□□ -0.7
HDAC9-220ENST00000461409 PRMT2P55345 433 aa10.7□□□□□ -0.7
HDAC9-220ENST00000461409 LACTBP83111 547 aaPredicted RBP10.7□□□□□ -0.7
HDAC9-220ENST00000461409 MECOMQ03112 1051 aa10.7□□□□□ -0.7
HDAC9-220ENST00000461409 PTGDRQ13258 359 aa10.7□□□□□ -0.7
HDAC9-220ENST00000461409 ZKSCAN2Q63HK3 967 aa10.7□□□□□ -0.7
HDAC9-220ENST00000461409 SPATA5Q8NB90 893 aa10.7□□□□□ -0.7
HDAC9-220ENST00000461409 TATDN2Q93075 761 aa10.7□□□□□ -0.7
HDAC9-220ENST00000461409 CLUAP1Q96AJ1 413 aa10.7□□□□□ -0.7
HDAC9-220ENST00000461409 IRX2Q9BZI1 471 aaPredicted RBP10.7□□□□□ -0.7
HDAC9-220ENST00000461409 ATRNL1Q5VV63 1379 aa10.69□□□□□ -0.7
HDAC9-220ENST00000461409 GPR75-ASB3A0A0A6YYF3 556 aa10.69□□□□□ -0.7
HDAC9-220ENST00000461409 PNMA6EA0A0J9YXQ4 647 aa10.69□□□□□ -0.7
HDAC9-220ENST00000461409 PDHXO00330 501 aa10.69□□□□□ -0.7
HDAC9-220ENST00000461409 CXCL11O14625 94 aa10.69□□□□□ -0.7
HDAC9-220ENST00000461409 LDHCP07864 332 aa10.69□□□□□ -0.7
HDAC9-220ENST00000461409 UQCRFS1P1P0C7P4 283 aa10.69□□□□□ -0.7
HDAC9-220ENST00000461409 ARID4AP29374 1257 aaPredicted RBP10.69□□□□□ -0.7
HDAC9-220ENST00000461409 BTDP43251 543 aa10.69□□□□□ -0.7
HDAC9-220ENST00000461409 ZFPM1Q8IX07 1006 aa10.69□□□□□ -0.7
HDAC9-220ENST00000461409 FTSJ3Q8IY81 847 aaKnown RBP10.69□□□□□ -0.7
HDAC9-220ENST00000461409 SCYL3Q8IZE3 742 aa10.69□□□□□ -0.7
HDAC9-220ENST00000461409 ZNF333Q96JL9 665 aa10.69□□□□□ -0.7
HDAC9-220ENST00000461409 PARK7Q99497 189 aaKnown RBP10.69□□□□□ -0.7
HDAC9-220ENST00000461409 HMG20BQ9P0W2 317 aa10.69□□□□□ -0.7
HDAC9-220ENST00000461409 PNMA3Q9UL41 463 aa10.69□□□□□ -0.7
HDAC9-220ENST00000461409 PTCH2Q9Y6C5 1203 aa10.69□□□□□ -0.7
HDAC9-220ENST00000461409 MKI67P46013 3256 aaKnown RBP10.69□□□□□ -0.7
HDAC9-220ENST00000461409 PHF20L1A8MW92 1017 aa10.68□□□□□ -0.7
HDAC9-220ENST00000461409 CTNND1O60716 968 aaKnown RBP10.68□□□□□ -0.7
HDAC9-220ENST00000461409 PTPRAP18433 802 aa10.68□□□□□ -0.7
HDAC9-220ENST00000461409 HOXD10P28358 340 aa10.68□□□□□ -0.7
HDAC9-220ENST00000461409 HNRNPUQ00839 825 aaKnown RBP eCLIP10.68□□□□□ -0.7
HDAC9-220ENST00000461409 CAP1Q01518 475 aa10.68□□□□□ -0.7
HDAC9-220ENST00000461409 MAP3K10Q02779 954 aa10.68□□□□□ -0.7
HDAC9-220ENST00000461409 PICALMQ13492 652 aa10.68□□□□□ -0.7
HDAC9-220ENST00000461409 C17orf99Q6UX52 265 aa10.68□□□□□ -0.7
HDAC9-220ENST00000461409 FASTKD5Q7L8L6 764 aaKnown RBP10.68□□□□□ -0.7
HDAC9-220ENST00000461409 TMEM57Q8N5G2 664 aa10.68□□□□□ -0.7
HDAC9-220ENST00000461409 NOL10Q9BSC4 688 aaKnown RBP10.68□□□□□ -0.7
HDAC9-220ENST00000461409 RAI14Q9P0K7 980 aa10.68□□□□□ -0.7
HDAC9-220ENST00000461409 MYH2Q9UKX2 1941 aa10.67□□□□□ -0.7
HDAC9-220ENST00000461409 A0A0G2JLL6 359 aaPredicted RBP10.67□□□□□ -0.7
HDAC9-220ENST00000461409 DDTLA6NHG4 134 aaPredicted RBP10.67□□□□□ -0.7
HDAC9-220ENST00000461409 OS9Q13438 667 aaPredicted RBP10.67□□□□□ -0.7
HDAC9-220ENST00000461409 MOGSQ13724 837 aa10.67□□□□□ -0.7
HDAC9-220ENST00000461409 SLC4A8Q2Y0W8 1093 aa10.67□□□□□ -0.7
HDAC9-220ENST00000461409 NUDT18Q6ZVK8 323 aa10.67□□□□□ -0.7
HDAC9-220ENST00000461409 SH3BP5LQ7L8J4 393 aa10.67□□□□□ -0.7
HDAC9-220ENST00000461409 PRRT2Q7Z6L0 340 aaPredicted RBP10.67□□□□□ -0.7
HDAC9-220ENST00000461409 NSUN4Q96CB9 384 aaKnown RBP10.67□□□□□ -0.7
HDAC9-220ENST00000461409 ARHGAP39Q9C0H5 1083 aa10.67□□□□□ -0.7
HDAC9-220ENST00000461409 GPR108Q9NPR9 543 aa10.67□□□□□ -0.7
HDAC9-220ENST00000461409 DDX4Q9NQI0 724 aaKnown RBP10.67□□□□□ -0.7
HDAC9-220ENST00000461409 LRP2BPQ9P2M1 347 aa10.67□□□□□ -0.7
HDAC9-220ENST00000461409 CPA4Q9UI42 421 aa10.67□□□□□ -0.7
HDAC9-220ENST00000461409 ZHX2Q9Y6X8 837 aa10.67□□□□□ -0.7
HDAC9-220ENST00000461409 BRCA2P51587 3418 aa10.67□□□□□ -0.7
HDAC9-220ENST00000461409 KIAA0100Q14667 2235 aaKnown RBP10.66□□□□□ -0.7
HDAC9-220ENST00000461409 AK9Q5TCS8 1911 aa10.66□□□□□ -0.7
HDAC9-220ENST00000461409 ADGRA2Q96PE1 1338 aa10.66□□□□□ -0.7
HDAC9-220ENST00000461409 DOCK2Q92608 1830 aa10.66□□□□□ -0.7
HDAC9-220ENST00000461409 IGSF3O75054 1194 aa10.66□□□□□ -0.7
HDAC9-220ENST00000461409 FMNL1O95466 1100 aaPredicted RBP10.66□□□□□ -0.7
HDAC9-220ENST00000461409 MCAMP43121 646 aa10.66□□□□□ -0.7
HDAC9-220ENST00000461409 PSMC4P43686 418 aa10.66□□□□□ -0.7
HDAC9-220ENST00000461409 RHBDL3P58872 404 aa10.66□□□□□ -0.7
HDAC9-220ENST00000461409 CCDC158Q5M9N0 1113 aa10.66□□□□□ -0.7
HDAC9-220ENST00000461409 PI16Q6UXB8 463 aa10.66□□□□□ -0.7
HDAC9-220ENST00000461409 TBC1D9Q6ZT07 1266 aa10.66□□□□□ -0.7
HDAC9-220ENST00000461409 ITPRIPQ8IWB1 547 aa10.66□□□□□ -0.7
HDAC9-220ENST00000461409 SSH3Q8TE77 659 aa10.66□□□□□ -0.7
HDAC9-220ENST00000461409 ZNF384Q8TF68 577 aa10.66□□□□□ -0.7
HDAC9-220ENST00000461409 GCC1Q96CN9 775 aa10.66□□□□□ -0.7
HDAC9-220ENST00000461409 TNNQ9UQP3 1299 aa10.66□□□□□ -0.7
HDAC9-220ENST00000461409 SLC45A1Q9Y2W3 748 aa10.66□□□□□ -0.7
HDAC9-220ENST00000461409 AFG3L2Q9Y4W6 797 aa10.66□□□□□ -0.7
HDAC9-220ENST00000461409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.66□□□□□ -0.7
HDAC9-220ENST00000461409 RBBP6Q7Z6E9 1792 aaKnown RBP10.66□□□□□ -0.7
HDAC9-220ENST00000461409 COL2A1P02458 1487 aaPredicted RBP10.66□□□□□ -0.7
HDAC9-220ENST00000461409 SURF6O75683 361 aaKnown RBP10.65□□□□□ -0.7
HDAC9-220ENST00000461409 BAG3O95817 575 aa10.65□□□□□ -0.7
HDAC9-220ENST00000461409 EN2P19622 333 aaPredicted RBP10.65□□□□□ -0.7
HDAC9-220ENST00000461409 FCGRTP55899 365 aa10.65□□□□□ -0.7
HDAC9-220ENST00000461409 ATP8B2P98198 1209 aa10.65□□□□□ -0.7
HDAC9-220ENST00000461409 TNNI3KQ59H18 835 aa10.65□□□□□ -0.7
HDAC9-220ENST00000461409 TTC39AQ5SRH9 613 aa10.65□□□□□ -0.7
HDAC9-220ENST00000461409 NAA16Q6N069 864 aaPredicted RBP10.65□□□□□ -0.7
HDAC9-220ENST00000461409 GPAT2Q6NUI2 795 aa10.65□□□□□ -0.7
HDAC9-220ENST00000461409 TEX11Q8IYF3 940 aa10.65□□□□□ -0.7
HDAC9-220ENST00000461409 RAET1EQ8TD07 263 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms