RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 DEXIO95424 95 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 F13A1P00488 732 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 SMARCA1P28370 1054 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 PTGER2P43116 358 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 ANTXR2P58335 489 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 KRT85P78386 507 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 TRAF1Q13077 416 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 CFAP100Q494V2 611 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 APOBEC3HQ6NTF7 200 aaKnown RBP8.68□□□□□ -1.02
LSG1-205ENST00000461343 CDC42EP5Q6NZY7 148 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 CYB5R4Q7L1T6 521 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 FAM83AQ86UY5 434 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 MICU3Q86XE3 530 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 TEX2Q8IWB9 1127 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 ZNF654Q8IZM8 581 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 CERS5Q8N5B7 392 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 FANCBQ8NB91 859 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 NEDD1Q8NHV4 660 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 CCDC12Q8WUD4 166 aaPredicted RBP8.68□□□□□ -1.02
LSG1-205ENST00000461343 C8orf76Q96K31 380 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 TCEANC2Q96MN5 208 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 RNF26Q9BY78 433 aaPredicted RBP8.68□□□□□ -1.02
LSG1-205ENST00000461343 PDGFDQ9GZP0 370 aaPredicted RBP8.68□□□□□ -1.02
LSG1-205ENST00000461343 ISY1Q9ULR0 285 aaKnown RBP8.68□□□□□ -1.02
LSG1-205ENST00000461343 TAF6LQ9Y6J9 622 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 ATRNL1Q5VV63 1379 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 BRCA1P38398 1863 aaKnown RBP8.68□□□□□ -1.02
LSG1-205ENST00000461343 FER1L6Q2WGJ9 1857 aa8.68□□□□□ -1.02
LSG1-205ENST00000461343 VPS37CA5D8V6 355 aaPredicted RBP8.67□□□□□ -1.02
LSG1-205ENST00000461343 SPDYE2BA6NHP3 402 aa8.67□□□□□ -1.02
LSG1-205ENST00000461343 hCG_1984214I3L0E3 225 aa8.67□□□□□ -1.02
LSG1-205ENST00000461343 BAG4O95429 457 aaKnown RBP8.67□□□□□ -1.02
LSG1-205ENST00000461343 SPDYE6P0CI01 402 aa8.67□□□□□ -1.02
LSG1-205ENST00000461343 TOP1P11387 765 aaKnown RBP8.67□□□□□ -1.02
LSG1-205ENST00000461343 LMNB1P20700 586 aa8.67□□□□□ -1.02
LSG1-205ENST00000461343 CDK8P49336 464 aa8.67□□□□□ -1.02
LSG1-205ENST00000461343 TFAP4Q01664 338 aa8.67□□□□□ -1.02
LSG1-205ENST00000461343 GNL2Q13823 731 aaKnown RBP8.67□□□□□ -1.02
LSG1-205ENST00000461343 RCSD1Q6JBY9 416 aa8.67□□□□□ -1.02
LSG1-205ENST00000461343 OLFM4Q6UX06 510 aa8.67□□□□□ -1.02
LSG1-205ENST00000461343 ZSCAN29Q8IWY8 852 aaPredicted RBP8.67□□□□□ -1.02
LSG1-205ENST00000461343 ZNF713Q8N859 430 aaPredicted RBP8.67□□□□□ -1.02
LSG1-205ENST00000461343 ENAHQ8N8S7 591 aaPredicted RBP8.67□□□□□ -1.02
LSG1-205ENST00000461343 NECAB1Q8N987 351 aa8.67□□□□□ -1.02
LSG1-205ENST00000461343 NSUN7Q8NE18 718 aaKnown RBP8.67□□□□□ -1.02
LSG1-205ENST00000461343 LRRC2Q9BYS8 371 aa8.67□□□□□ -1.02
LSG1-205ENST00000461343 SH2D4AQ9H788 454 aa8.67□□□□□ -1.02
LSG1-205ENST00000461343 ORC3Q9UBD5 711 aaPredicted RBP8.67□□□□□ -1.02
LSG1-205ENST00000461343 ZC3H4Q9UPT8 1303 aaKnown RBP8.67□□□□□ -1.02
LSG1-205ENST00000461343 MYH1P12882 1939 aa8.66□□□□□ -1.02
LSG1-205ENST00000461343 BAZ2AQ9UIF9 1905 aaKnown RBP8.66□□□□□ -1.02
LSG1-205ENST00000461343 GOLGA6L4A6NEF3 574 aa8.66□□□□□ -1.02
LSG1-205ENST00000461343 H7C1D1 291 aa8.66□□□□□ -1.02
LSG1-205ENST00000461343 PSMD14O00487 310 aa8.66□□□□□ -1.02
LSG1-205ENST00000461343 WDHD1O75717 1129 aaPredicted RBP8.66□□□□□ -1.02
LSG1-205ENST00000461343 FMNL1O95466 1100 aaPredicted RBP8.66□□□□□ -1.02
LSG1-205ENST00000461343 TTLL1O95922 423 aa8.66□□□□□ -1.02
LSG1-205ENST00000461343 CALML3P27482 149 aa8.66□□□□□ -1.02
LSG1-205ENST00000461343 SCNN1DP51172 638 aa8.66□□□□□ -1.02
LSG1-205ENST00000461343 CCT2P78371 535 aaKnown RBP8.66□□□□□ -1.02
LSG1-205ENST00000461343 PICALMQ13492 652 aa8.66□□□□□ -1.02
LSG1-205ENST00000461343 SEC23AQ15436 765 aa8.66□□□□□ -1.02
LSG1-205ENST00000461343 GALNT17Q6IS24 598 aa8.66□□□□□ -1.02
LSG1-205ENST00000461343 CHST3Q7LGC8 479 aa8.66□□□□□ -1.02
LSG1-205ENST00000461343 JMYQ8N9B5 988 aa8.66□□□□□ -1.02
LSG1-205ENST00000461343 FAM151AQ8WW52 585 aa8.66□□□□□ -1.02
LSG1-205ENST00000461343 GMLQ99445 158 aa8.66□□□□□ -1.02
LSG1-205ENST00000461343 KANSL2Q9H9L4 492 aa8.66□□□□□ -1.02
LSG1-205ENST00000461343 CABP5Q9NP86 173 aa8.66□□□□□ -1.02
LSG1-205ENST00000461343 PPP2R3BQ9Y5P8 575 aa8.66□□□□□ -1.02
LSG1-205ENST00000461343 DDX60LQ5H9U9 1706 aaKnown RBP8.66□□□□□ -1.02
LSG1-205ENST00000461343 ELP1O95163 1332 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 PSDA5PKW4 1024 aaPredicted RBP8.65□□□□□ -1.02
LSG1-205ENST00000461343 FZD9O00144 591 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 TBC1D12O60347 775 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 RAD17O75943 681 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 LETM1O95202 739 aaPredicted RBP8.65□□□□□ -1.02
LSG1-205ENST00000461343 LARGE1O95461 756 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 BMP15O95972 392 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 ZNF280AP59817 542 aaPredicted RBP8.65□□□□□ -1.02
LSG1-205ENST00000461343 GABPAQ06546 454 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 SPDYE2Q495Y8 402 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 ASPRV1Q53RT3 343 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 GPATCH4Q5T3I0 446 aaKnown RBP8.65□□□□□ -1.02
LSG1-205ENST00000461343 TMEM179Q6ZVK1 233 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 METTL16Q86W50 562 aaKnown RBP8.65□□□□□ -1.02
LSG1-205ENST00000461343 APOBEC3FQ8IUX4 373 aaKnown RBP8.65□□□□□ -1.02
LSG1-205ENST00000461343 GPC2Q8N158 579 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 TMEM87AQ8NBN3 555 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 PNMA1Q8ND90 353 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 CCDC148Q8NFR7 591 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 FBXO18Q8NFZ0 1043 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 NUP133Q8WUM0 1156 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 GLT8D2Q9H1C3 349 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 SH3GLB2Q9NR46 395 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 SEC63Q9UGP8 760 aaKnown RBP8.65□□□□□ -1.02
LSG1-205ENST00000461343 SAP30BPQ9UHR5 308 aaKnown RBP8.65□□□□□ -1.02
LSG1-205ENST00000461343 BRPF3Q9ULD4 1205 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 STX8Q9UNK0 236 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 HPS5Q9UPZ3 1129 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms