RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 CHST3Q7LGC8 479 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 KRT25Q7Z3Z0 450 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 HOOK2Q96ED9 719 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 CLSTN2Q9H4D0 955 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 GOLGA8CPA6NN73 597 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 RGS16O15492 202 aaPredicted RBP9.95□□□□□ -0.82
BRCA1-205ENST00000461221 PRPF6O94906 941 aaKnown RBP9.95□□□□□ -0.82
BRCA1-205ENST00000461221 GNA14O95837 355 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 NLRP12P59046 1061 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 KRT71Q3SY84 523 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 PALM2Q8IXS6 379 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 TEKT1Q969V4 418 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 AZI2Q9H6S1 392 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 CD2APQ9Y5K6 639 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 CCDC84Q86UT8 332 aaPredicted RBP9.95□□□□□ -0.82
BRCA1-205ENST00000461221 RSAD2Q8WXG1 361 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 RIC8AQ9NPQ8 531 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 HOMER3Q9NSC5 361 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 LARSQ9P2J5 1176 aaKnown RBP9.95□□□□□ -0.82
BRCA1-205ENST00000461221 BAIAP2L1Q9UHR4 511 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 GOLGA8QA0A0J9YX86 632 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 GOLGA8OA6NCC3 632 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 ARHGAP42A6NI28 874 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 GOLGA8NF8WBI6 632 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 IRS4O14654 1257 aaPredicted RBP9.95□□□□□ -0.82
BRCA1-205ENST00000461221 HIP1RO75146 1068 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 HAUS1Q96CS2 278 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 KRT12Q99456 494 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 DNM3Q9UQ16 869 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 LUC7L3O95232 432 aaKnown RBP9.94□□□□□ -0.82
BRCA1-205ENST00000461221 NCAPH2Q6IBW4 605 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 PIK3AP1Q6ZUJ8 805 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 SND1Q7KZF4 910 aaKnown RBP eCLIP9.94□□□□□ -0.82
BRCA1-205ENST00000461221 TEX11Q8IYF3 940 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 GPCPD1Q9NPB8 672 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 GOLGA8KD6RF30 607 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 CD19P15391 556 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 PPP2R5BQ15173 497 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 TTC38Q5R3I4 469 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 PDZD4Q76G19 769 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-205ENST00000461221 CADPS2Q86UW7 1296 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 LZTS2Q9BRK4 669 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 SUDS3Q9H7L9 328 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-205ENST00000461221 TRPC6Q9Y210 931 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 HGSO14964 777 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-205ENST00000461221 EXOC3O60645 756 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 OPHN1O60890 802 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 RPS6KB1P23443 525 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 PDCD2Q16342 344 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-205ENST00000461221 CCDC51Q96ER9 411 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 AMFRQ9UKV5 643 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 MBD4O95243 580 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 SLC8A1P32418 973 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 ADCY7P51828 1080 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 LONRF2Q1L5Z9 754 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 BEND3Q5T5X7 828 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 TRIM56Q9BRZ2 755 aaKnown RBP9.94□□□□□ -0.82
BRCA1-205ENST00000461221 IVNS1ABPQ9Y6Y0 642 aa9.94□□□□□ -0.82
BRCA1-205ENST00000461221 OAS2P29728 719 aaKnown RBP9.93□□□□□ -0.82
BRCA1-205ENST00000461221 MAP2K2P36507 400 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 ZNF75DP51815 510 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 TFCP2Q12800 502 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 NONOQ15233 471 aaKnown RBP eCLIP9.93□□□□□ -0.82
BRCA1-205ENST00000461221 HSP90AA5PQ58FG0 334 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 RAB20Q9NX57 234 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 FAF1Q9UNN5 650 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-205ENST00000461221 NSFL1CQ9UNZ2 370 aaKnown RBP9.93□□□□□ -0.82
BRCA1-205ENST00000461221 SOS1Q07889 1333 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-205ENST00000461221 SPECC1L-ADORA2AF8WAN1 911 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 RXRAP19793 462 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 CTAGE3PQ8IX95 158 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 SNX29Q8TEQ0 813 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 ZBTB9Q96C00 473 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 ZNF277Q9NRM2 450 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-205ENST00000461221 RTCBQ9Y3I0 505 aaKnown RBP9.93□□□□□ -0.82
BRCA1-205ENST00000461221 ABCC5O15440 1437 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 NXNQ6DKJ4 435 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 JADE1Q6IE81 842 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 ANKRD42Q8N9B4 389 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 IWS1Q96ST2 819 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 LRWD1Q9UFC0 647 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 STK38LQ9Y2H1 464 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 IFT140Q96RY7 1462 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 ACEP12821 1306 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 GARSP41250 739 aaKnown RBP9.93□□□□□ -0.82
BRCA1-205ENST00000461221 TXKP42681 527 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 CCDC13Q8IYE1 715 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 MYCT1Q8N699 235 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 ZBED4O75132 1171 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 TTC4O95801 387 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 OATP04181 439 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 BRD3Q15059 726 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 ELF2Q15723 593 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 HADHQ16836 314 aaKnown RBP9.93□□□□□ -0.82
BRCA1-205ENST00000461221 EIF2AQ9BY44 585 aaKnown RBP9.93□□□□□ -0.82
BRCA1-205ENST00000461221 MIS12Q9H081 205 aa9.93□□□□□ -0.82
BRCA1-205ENST00000461221 TYW1Q9NV66 732 aaKnown RBP9.93□□□□□ -0.82
BRCA1-205ENST00000461221 PA2G4Q9UQ80 394 aaKnown RBP9.93□□□□□ -0.82
BRCA1-205ENST00000461221 IGSF3O75054 1194 aa9.92□□□□□ -0.82
BRCA1-205ENST00000461221 KRT19P08727 400 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms