RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 CYP7A1P22680 504 aa17.97■□□□□ 0.47
SMPD4-216ENST00000461187 FXR1P51114 621 aaKnown RBP eCLIP17.97■□□□□ 0.47
SMPD4-216ENST00000461187 BACE1P56817 501 aa17.97■□□□□ 0.47
SMPD4-216ENST00000461187 MTMR2Q13614 643 aa17.97■□□□□ 0.47
SMPD4-216ENST00000461187 DPF3Q92784 378 aa17.97■□□□□ 0.47
SMPD4-216ENST00000461187 FRMPD3Q5JV73 1810 aa17.96■□□□□ 0.47
SMPD4-216ENST00000461187 SZT2Q5T011 3432 aa17.96■□□□□ 0.47
SMPD4-216ENST00000461187 CRACR2BQ8N4Y2 399 aaPredicted RBP17.96■□□□□ 0.47
SMPD4-216ENST00000461187 GINM1Q9NU53 330 aa17.96■□□□□ 0.47
SMPD4-216ENST00000461187 SAP30BPQ9UHR5 308 aaKnown RBP17.96■□□□□ 0.47
SMPD4-216ENST00000461187 TAOK2Q9UL54 1235 aa17.96■□□□□ 0.47
SMPD4-216ENST00000461187 NDUFB9Q9Y6M9 179 aa17.96■□□□□ 0.47
SMPD4-216ENST00000461187 IDH1O75874 414 aaKnown RBP17.95■□□□□ 0.46
SMPD4-216ENST00000461187 FARP2O94887 1054 aaPredicted RBP17.95■□□□□ 0.46
SMPD4-216ENST00000461187 GDF11O95390 407 aa17.95■□□□□ 0.46
SMPD4-216ENST00000461187 HOXA7P31268 230 aaPredicted RBP17.95■□□□□ 0.46
SMPD4-216ENST00000461187 HTATIP2Q9BUP3 242 aa17.95■□□□□ 0.46
SMPD4-216ENST00000461187 TRIM34Q9BYJ4 488 aa17.95■□□□□ 0.46
SMPD4-216ENST00000461187 PAK6Q9NQU5 681 aaPredicted RBP17.95■□□□□ 0.46
SMPD4-216ENST00000461187 MORF4L1Q9UBU8 362 aa17.95■□□□□ 0.46
SMPD4-216ENST00000461187 GJD2Q9UKL4 321 aa17.95■□□□□ 0.46
SMPD4-216ENST00000461187 ZBTB21Q9ULJ3 1066 aa17.95■□□□□ 0.46
SMPD4-216ENST00000461187 EXOC6BQ9Y2D4 811 aa17.95■□□□□ 0.46
SMPD4-216ENST00000461187 ZNFX1Q9P2E3 1918 aaKnown RBP17.94■□□□□ 0.46
SMPD4-216ENST00000461187 C19orf81C9J6K1 198 aa17.94■□□□□ 0.46
SMPD4-216ENST00000461187 HLA-DOAP06340 250 aa17.94■□□□□ 0.46
SMPD4-216ENST00000461187 MIGA1Q8NAN2 632 aa17.94■□□□□ 0.46
SMPD4-216ENST00000461187 PANK1Q8TE04 598 aa17.94■□□□□ 0.46
SMPD4-216ENST00000461187 DEFB118Q96PH6 123 aa17.94■□□□□ 0.46
SMPD4-216ENST00000461187 ANTXR1Q9H6X2 564 aa17.94■□□□□ 0.46
SMPD4-216ENST00000461187 TMOD4Q9NZQ9 345 aa17.94■□□□□ 0.46
SMPD4-216ENST00000461187 USP17L10C9JJH3 530 aa17.93■□□□□ 0.46
SMPD4-216ENST00000461187 CAPN2P17655 700 aa17.93■□□□□ 0.46
SMPD4-216ENST00000461187 IRX3P78415 501 aaPredicted RBP17.93■□□□□ 0.46
SMPD4-216ENST00000461187 MAGEB6Q8N7X4 407 aa17.93■□□□□ 0.46
SMPD4-216ENST00000461187 P2RX7Q99572 595 aaKnown RBP17.93■□□□□ 0.46
SMPD4-216ENST00000461187 CRISPLD2Q9H0B8 497 aa17.93■□□□□ 0.46
SMPD4-216ENST00000461187 ZBED9Q6R2W3 1325 aa17.93■□□□□ 0.46
SMPD4-216ENST00000461187 RLFQ13129 1914 aa17.92■□□□□ 0.46
SMPD4-216ENST00000461187 PEX10O60683 326 aa17.92■□□□□ 0.46
SMPD4-216ENST00000461187 TFRCP02786 760 aaKnown RBP17.92■□□□□ 0.46
SMPD4-216ENST00000461187 HERVK_113P62684 666 aa17.92■□□□□ 0.46
SMPD4-216ENST00000461187 DIEXFQ68CQ4 756 aaKnown RBP17.92■□□□□ 0.46
SMPD4-216ENST00000461187 CHRDL2Q6WN34 429 aa17.92■□□□□ 0.46
SMPD4-216ENST00000461187 AACSQ86V21 672 aa17.92■□□□□ 0.46
SMPD4-216ENST00000461187 CERS3Q8IU89 383 aa17.92■□□□□ 0.46
SMPD4-216ENST00000461187 ERC1Q8IUD2 1116 aa17.92■□□□□ 0.46
SMPD4-216ENST00000461187 TXNRD2Q9NNW7 524 aa17.92■□□□□ 0.46
SMPD4-216ENST00000461187 PARP14Q460N5 1801 aa17.91■□□□□ 0.46
SMPD4-216ENST00000461187 HMGCRP04035 888 aa17.91■□□□□ 0.46
SMPD4-216ENST00000461187 USP5P45974 858 aa17.91■□□□□ 0.46
SMPD4-216ENST00000461187 MAP3K12Q12852 859 aa17.91■□□□□ 0.46
SMPD4-216ENST00000461187 TATDN1Q6P1N9 297 aa17.91■□□□□ 0.46
SMPD4-216ENST00000461187 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.91■□□□□ 0.46
SMPD4-216ENST00000461187 EMILIN3Q9NT22 766 aa17.91■□□□□ 0.46
SMPD4-216ENST00000461187 GH2P01242 217 aa17.9■□□□□ 0.46
SMPD4-216ENST00000461187 TRIM32Q13049 653 aa17.9■□□□□ 0.46
SMPD4-216ENST00000461187 TMED8Q6PL24 325 aaPredicted RBP17.9■□□□□ 0.46
SMPD4-216ENST00000461187 EHD4Q9H223 541 aa17.9■□□□□ 0.46
SMPD4-216ENST00000461187 IL1RAPL2Q9NP60 686 aa17.9■□□□□ 0.46
SMPD4-216ENST00000461187 RBPJLQ9UBG7 517 aa17.9■□□□□ 0.46
SMPD4-216ENST00000461187 SERPINB13Q9UIV8 391 aa17.9■□□□□ 0.46
SMPD4-216ENST00000461187 Q3C1V9 767 aa17.89■□□□□ 0.45
SMPD4-216ENST00000461187 HSP90AB4PQ58FF6 505 aa17.89■□□□□ 0.45
SMPD4-216ENST00000461187 USP17L2Q6R6M4 530 aa17.89■□□□□ 0.45
SMPD4-216ENST00000461187 POTEEQ6S8J3 1075 aa17.89■□□□□ 0.45
SMPD4-216ENST00000461187 GPRC5AQ8NFJ5 357 aa17.89■□□□□ 0.45
SMPD4-216ENST00000461187 RHPN1Q8TCX5 695 aa17.89■□□□□ 0.45
SMPD4-216ENST00000461187 RIOK1Q9BRS2 568 aaKnown RBP17.89■□□□□ 0.45
SMPD4-216ENST00000461187 RBM27Q9P2N5 1060 aaKnown RBP17.89■□□□□ 0.45
SMPD4-216ENST00000461187 NR2E3Q9Y5X4 410 aa17.89■□□□□ 0.45
SMPD4-216ENST00000461187 TRIB2Q92519 343 aa17.88■□□□□ 0.45
SMPD4-216ENST00000461187 PAWRQ96IZ0 340 aaKnown RBP17.88■□□□□ 0.45
SMPD4-216ENST00000461187 PRO3102Q9H379 93 aa17.88■□□□□ 0.45
SMPD4-216ENST00000461187 RPTORQ8N122 1335 aa17.88■□□□□ 0.45
SMPD4-216ENST00000461187 COL11A1P12107 1806 aaPredicted RBP17.88■□□□□ 0.45
SMPD4-216ENST00000461187 CYP2B6P20813 491 aa17.87■□□□□ 0.45
SMPD4-216ENST00000461187 PLCD1P51178 756 aa17.87■□□□□ 0.45
SMPD4-216ENST00000461187 ERVK-9P63128 1117 aa17.87■□□□□ 0.45
SMPD4-216ENST00000461187 ERVK-24P63145 666 aa17.87■□□□□ 0.45
SMPD4-216ENST00000461187 TTC6Q86TZ1 520 aa17.87■□□□□ 0.45
SMPD4-216ENST00000461187 DIS3LQ8TF46 1054 aaKnown RBP17.87■□□□□ 0.45
SMPD4-216ENST00000461187 C12orf42Q96LP6 360 aa17.87■□□□□ 0.45
SMPD4-216ENST00000461187 NUDT12Q9BQG2 462 aa17.87■□□□□ 0.45
SMPD4-216ENST00000461187 HMX1Q9NP08 348 aaPredicted RBP17.87■□□□□ 0.45
SMPD4-216ENST00000461187 EVI5O60447 810 aa17.86■□□□□ 0.45
SMPD4-216ENST00000461187 MS4A1P11836 297 aa17.86■□□□□ 0.45
SMPD4-216ENST00000461187 XRCC5P13010 732 aaKnown RBP17.86■□□□□ 0.45
SMPD4-216ENST00000461187 PDE6AP16499 860 aa17.86■□□□□ 0.45
SMPD4-216ENST00000461187 MAPK4P31152 587 aa17.86■□□□□ 0.45
SMPD4-216ENST00000461187 TTF1Q15361 905 aaPredicted RBP17.86■□□□□ 0.45
SMPD4-216ENST00000461187 CERKLQ49MI3 558 aaPredicted RBP17.86■□□□□ 0.45
SMPD4-216ENST00000461187 ANKLE1Q8NAG6 615 aa17.86■□□□□ 0.45
SMPD4-216ENST00000461187 GTF3C2Q8WUA4 911 aaPredicted RBP17.86■□□□□ 0.45
SMPD4-216ENST00000461187 SOCS4Q8WXH5 440 aa17.86■□□□□ 0.45
SMPD4-216ENST00000461187 PORCNQ9H237 461 aa17.86■□□□□ 0.45
SMPD4-216ENST00000461187 A0A0G2JMZ2 1700 aa17.85■□□□□ 0.45
SMPD4-216ENST00000461187 MAGEB6P1A0A0J9YX57 407 aa17.85■□□□□ 0.45
SMPD4-216ENST00000461187 SHMT1P34896 483 aa17.85■□□□□ 0.45
SMPD4-216ENST00000461187 RAB3GAP1Q15042 981 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms