RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 IRX3P78415 501 aaPredicted RBP17.9■□□□□ 0.46
NCK1-202ENST00000460960 GSTO1P78417 241 aa17.9■□□□□ 0.46
NCK1-202ENST00000460960 HSP90AB4PQ58FF6 505 aa17.9■□□□□ 0.46
NCK1-202ENST00000460960 PI16Q6UXB8 463 aa17.9■□□□□ 0.46
NCK1-202ENST00000460960 AACSQ86V21 672 aa17.9■□□□□ 0.46
NCK1-202ENST00000460960 ANKLE1Q8NAG6 615 aa17.9■□□□□ 0.46
NCK1-202ENST00000460960 KIF1BPQ96EK5 621 aa17.9■□□□□ 0.46
NCK1-202ENST00000460960 PDS5AQ29RF7 1337 aaKnown RBP17.9■□□□□ 0.46
NCK1-202ENST00000460960 RPTORQ8N122 1335 aa17.9■□□□□ 0.46
NCK1-202ENST00000460960 USP17L5A8MUK1 530 aa17.89■□□□□ 0.45
NCK1-202ENST00000460960 LDHCP07864 332 aa17.89■□□□□ 0.45
NCK1-202ENST00000460960 CYP2B6P20813 491 aa17.89■□□□□ 0.45
NCK1-202ENST00000460960 AAMPQ13685 434 aa17.89■□□□□ 0.45
NCK1-202ENST00000460960 TBC1D9Q6ZT07 1266 aa17.89■□□□□ 0.45
NCK1-202ENST00000460960 TEX11Q8IYF3 940 aa17.89■□□□□ 0.45
NCK1-202ENST00000460960 GDF15Q99988 308 aa17.89■□□□□ 0.45
NCK1-202ENST00000460960 C11orf49Q9H6J7 331 aa17.89■□□□□ 0.45
NCK1-202ENST00000460960 AS3MTQ9HBK9 375 aa17.89■□□□□ 0.45
NCK1-202ENST00000460960 MYO5AQ9Y4I1 1855 aaKnown RBP17.88■□□□□ 0.45
NCK1-202ENST00000460960 CAP2P40123 477 aa17.88■□□□□ 0.45
NCK1-202ENST00000460960 Q7L0L9 218 aa17.88■□□□□ 0.45
NCK1-202ENST00000460960 DEFB123Q8N688 67 aa17.88■□□□□ 0.45
NCK1-202ENST00000460960 NOL10Q9BSC4 688 aaKnown RBP17.88■□□□□ 0.45
NCK1-202ENST00000460960 TBC1D2Q9BYX2 928 aa17.88■□□□□ 0.45
NCK1-202ENST00000460960 LRRCC1Q9C099 1032 aa17.88■□□□□ 0.45
NCK1-202ENST00000460960 MAGEA10P43363 369 aaPredicted RBP17.87■□□□□ 0.45
NCK1-202ENST00000460960 MTMR2Q13614 643 aa17.87■□□□□ 0.45
NCK1-202ENST00000460960 CCAR1Q8IX12 1150 aaKnown RBP17.87■□□□□ 0.45
NCK1-202ENST00000460960 ZNF384Q8TF68 577 aa17.87■□□□□ 0.45
NCK1-202ENST00000460960 TRIB2Q92519 343 aa17.87■□□□□ 0.45
NCK1-202ENST00000460960 TMOD4Q9NZQ9 345 aa17.87■□□□□ 0.45
NCK1-202ENST00000460960 HMG20BQ9P0W2 317 aa17.87■□□□□ 0.45
NCK1-202ENST00000460960 GJD2Q9UKL4 321 aa17.87■□□□□ 0.45
NCK1-202ENST00000460960 PEX10O60683 326 aa17.86■□□□□ 0.45
NCK1-202ENST00000460960 NPM3O75607 178 aaKnown RBP17.86■□□□□ 0.45
NCK1-202ENST00000460960 PRKAR2AP13861 404 aaKnown RBP17.86■□□□□ 0.45
NCK1-202ENST00000460960 BMP8BP34820 402 aa17.86■□□□□ 0.45
NCK1-202ENST00000460960 MCAMP43121 646 aa17.86■□□□□ 0.45
NCK1-202ENST00000460960 RRP1BQ14684 758 aaKnown RBP17.86■□□□□ 0.45
NCK1-202ENST00000460960 SPATA5Q8NB90 893 aa17.86■□□□□ 0.45
NCK1-202ENST00000460960 OTUD7AQ8TE49 926 aaPredicted RBP17.86■□□□□ 0.45
NCK1-202ENST00000460960 NSUN4Q96CB9 384 aaKnown RBP17.86■□□□□ 0.45
NCK1-202ENST00000460960 TRIM34Q9BYJ4 488 aa17.86■□□□□ 0.45
NCK1-202ENST00000460960 UBE2OQ9C0C9 1292 aaKnown RBP17.86■□□□□ 0.45
NCK1-202ENST00000460960 LRP2BPQ9P2M1 347 aa17.86■□□□□ 0.45
NCK1-202ENST00000460960 NDUFB9Q9Y6M9 179 aa17.86■□□□□ 0.45
NCK1-202ENST00000460960 PLXNB2O15031 1838 aa17.85■□□□□ 0.45
NCK1-202ENST00000460960 ZBTB22O15209 634 aa17.85■□□□□ 0.45
NCK1-202ENST00000460960 ARID4AP29374 1257 aaPredicted RBP17.85■□□□□ 0.45
NCK1-202ENST00000460960 CLASRPQ8N2M8 674 aaKnown RBP17.85■□□□□ 0.45
NCK1-202ENST00000460960 SH3RF3Q8TEJ3 882 aaPredicted RBP17.85■□□□□ 0.45
NCK1-202ENST00000460960 NUDT12Q9BQG2 462 aa17.85■□□□□ 0.45
NCK1-202ENST00000460960 CWC22Q9HCG8 908 aaKnown RBP17.85■□□□□ 0.45
NCK1-202ENST00000460960 SNRKQ9NRH2 765 aa17.85■□□□□ 0.45
NCK1-202ENST00000460960 HERC5Q9UII4 1024 aaKnown RBP17.85■□□□□ 0.45
NCK1-202ENST00000460960 LAMA3Q16787 3333 aa17.85■□□□□ 0.45
NCK1-202ENST00000460960 COL2A1P02458 1487 aaPredicted RBP17.84■□□□□ 0.45
NCK1-202ENST00000460960 MAP4K4O95819 1239 aaPredicted RBP17.84■□□□□ 0.45
NCK1-202ENST00000460960 ZKSCAN1P17029 563 aaPredicted RBP17.84■□□□□ 0.45
NCK1-202ENST00000460960 SH3D19Q5HYK7 790 aa17.84■□□□□ 0.45
NCK1-202ENST00000460960 TSHZ3Q63HK5 1081 aa17.84■□□□□ 0.45
NCK1-202ENST00000460960 SMC5Q8IY18 1101 aa17.84■□□□□ 0.45
NCK1-202ENST00000460960 TDHQ8IZJ6 230 aa17.84■□□□□ 0.45
NCK1-202ENST00000460960 CRACR2BQ8N4Y2 399 aaPredicted RBP17.84■□□□□ 0.45
NCK1-202ENST00000460960 P2RX7Q99572 595 aaKnown RBP17.84■□□□□ 0.45
NCK1-202ENST00000460960 RWDD1Q9H446 243 aaPredicted RBP17.84■□□□□ 0.45
NCK1-202ENST00000460960 MORF4L1Q9UBU8 362 aa17.84■□□□□ 0.45
NCK1-202ENST00000460960 OGDHLQ9ULD0 1010 aa17.84■□□□□ 0.45
NCK1-202ENST00000460960 COL6A3P12111 3177 aa17.83■□□□□ 0.45
NCK1-202ENST00000460960 MNX1P50219 401 aaPredicted RBP17.83■□□□□ 0.44
NCK1-202ENST00000460960 BACE1P56817 501 aa17.83■□□□□ 0.44
NCK1-202ENST00000460960 TTC39AQ5SRH9 613 aa17.83■□□□□ 0.44
NCK1-202ENST00000460960 ANKRD45Q5TZF3 282 aa17.83■□□□□ 0.44
NCK1-202ENST00000460960 B4GALNT3Q6L9W6 998 aa17.83■□□□□ 0.44
NCK1-202ENST00000460960 GPRC5AQ8NFJ5 357 aa17.83■□□□□ 0.44
NCK1-202ENST00000460960 SOCS4Q8WXH5 440 aa17.83■□□□□ 0.44
NCK1-202ENST00000460960 PAGR1Q9BTK6 254 aa17.83■□□□□ 0.44
NCK1-202ENST00000460960 AATFQ9NY61 560 aaKnown RBP eCLIP17.83■□□□□ 0.44
NCK1-202ENST00000460960 PI4KBQ9UBF8 816 aa17.83■□□□□ 0.44
NCK1-202ENST00000460960 GDF11O95390 407 aa17.82■□□□□ 0.44
NCK1-202ENST00000460960 ASNSP08243 561 aa17.82■□□□□ 0.44
NCK1-202ENST00000460960 IFIT2P09913 472 aaKnown RBP17.82■□□□□ 0.44
NCK1-202ENST00000460960 HERVK_113P62684 666 aa17.82■□□□□ 0.44
NCK1-202ENST00000460960 MAPKAPK5Q8IW41 473 aa17.82■□□□□ 0.44
NCK1-202ENST00000460960 TXNRD2Q9NNW7 524 aa17.82■□□□□ 0.44
NCK1-202ENST00000460960 PFASO15067 1338 aa17.81■□□□□ 0.44
NCK1-202ENST00000460960 BAG3O95817 575 aa17.81■□□□□ 0.44
NCK1-202ENST00000460960 SHROOM1Q2M3G4 852 aaPredicted RBP17.81■□□□□ 0.44
NCK1-202ENST00000460960 LRIT3Q3SXY7 679 aa17.81■□□□□ 0.44
NCK1-202ENST00000460960 NAA16Q6N069 864 aaPredicted RBP17.81■□□□□ 0.44
NCK1-202ENST00000460960 GPR153Q6NV75 609 aa17.81■□□□□ 0.44
NCK1-202ENST00000460960 TGFBRAP1Q8WUH2 860 aa17.81■□□□□ 0.44
NCK1-202ENST00000460960 WDR18Q9BV38 432 aa17.81■□□□□ 0.44
NCK1-202ENST00000460960 DHX36Q9H2U1 1008 aaKnown RBP17.81■□□□□ 0.44
NCK1-202ENST00000460960 SIPA1L1O43166 1804 aa17.8■□□□□ 0.44
NCK1-202ENST00000460960 UQCRFS1P1P0C7P4 283 aa17.8■□□□□ 0.44
NCK1-202ENST00000460960 MAPK4P31152 587 aa17.8■□□□□ 0.44
NCK1-202ENST00000460960 ZAP70P43403 619 aa17.8■□□□□ 0.44
NCK1-202ENST00000460960 MDM2Q00987 491 aaPredicted RBP17.8■□□□□ 0.44
NCK1-202ENST00000460960 CACNB2Q08289 660 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms