RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 ASNSP08243 561 aa13.21□□□□□ -0.3
APTX-209ENST00000460940 SLURP2P0DP57 97 aa13.21□□□□□ -0.3
APTX-209ENST00000460940 CHMLP26374 656 aa13.21□□□□□ -0.3
APTX-209ENST00000460940 GJA5P36382 358 aa13.21□□□□□ -0.3
APTX-209ENST00000460940 ALX1Q15699 326 aa13.21□□□□□ -0.3
APTX-209ENST00000460940 C16orf86Q6ZW13 317 aa13.21□□□□□ -0.3
APTX-209ENST00000460940 ZNF589Q86UQ0 364 aaPredicted RBP13.21□□□□□ -0.3
APTX-209ENST00000460940 BACH2Q9BYV9 841 aa13.21□□□□□ -0.3
APTX-209ENST00000460940 BAZ2AQ9UIF9 1905 aaKnown RBP13.21□□□□□ -0.3
APTX-209ENST00000460940 FOXP2O15409 715 aa13.2□□□□□ -0.3
APTX-209ENST00000460940 PTPRAP18433 802 aa13.2□□□□□ -0.3
APTX-209ENST00000460940 SHMT1P34896 483 aa13.2□□□□□ -0.3
APTX-209ENST00000460940 GTF2A2P52657 109 aa13.2□□□□□ -0.3
APTX-209ENST00000460940 INHBEP58166 350 aa13.2□□□□□ -0.3
APTX-209ENST00000460940 SKAP1Q86WV1 359 aa13.2□□□□□ -0.3
APTX-209ENST00000460940 CYP2D7A0A087X1C5 515 aa13.19□□□□□ -0.3
APTX-209ENST00000460940 CA12O43570 354 aa13.19□□□□□ -0.3
APTX-209ENST00000460940 SLC3A2P08195 630 aaKnown RBP13.19□□□□□ -0.3
APTX-209ENST00000460940 HSPD1P10809 573 aaKnown RBP13.19□□□□□ -0.3
APTX-209ENST00000460940 MKRN3Q13064 507 aaKnown RBP13.19□□□□□ -0.3
APTX-209ENST00000460940 SNAPC2Q13487 334 aa13.19□□□□□ -0.3
APTX-209ENST00000460940 CERKLQ49MI3 558 aaPredicted RBP13.19□□□□□ -0.3
APTX-209ENST00000460940 VPS53Q5VIR6 699 aa13.19□□□□□ -0.3
APTX-209ENST00000460940 CNKSR2Q8WXI2 1034 aa13.19□□□□□ -0.3
APTX-209ENST00000460940 ZIC5Q96T25 663 aa13.19□□□□□ -0.3
APTX-209ENST00000460940 ZNF287Q9HBT7 754 aa13.19□□□□□ -0.3
APTX-209ENST00000460940 ZBTB21Q9ULJ3 1066 aa13.19□□□□□ -0.3
APTX-209ENST00000460940 KCNH4Q9UQ05 1017 aa13.19□□□□□ -0.3
APTX-209ENST00000460940 CXCL11O14625 94 aa13.19□□□□□ -0.3
APTX-209ENST00000460940 PDIA4P13667 645 aaKnown RBP13.19□□□□□ -0.3
APTX-209ENST00000460940 TM4SF4P48230 202 aa13.19□□□□□ -0.3
APTX-209ENST00000460940 RRP1BQ14684 758 aaKnown RBP13.19□□□□□ -0.3
APTX-209ENST00000460940 BEGAINQ9BUH8 593 aa13.19□□□□□ -0.3
APTX-209ENST00000460940 AS3MTQ9HBK9 375 aa13.19□□□□□ -0.3
APTX-209ENST00000460940 WBP1LQ9NX94 342 aa13.19□□□□□ -0.3
APTX-209ENST00000460940 TESPA1A2RU30 521 aaPredicted RBP13.18□□□□□ -0.3
APTX-209ENST00000460940 USP17L5A8MUK1 530 aa13.18□□□□□ -0.3
APTX-209ENST00000460940 MINDY4BA8MYZ0 360 aa13.18□□□□□ -0.3
APTX-209ENST00000460940 IRF6O14896 467 aa13.18□□□□□ -0.3
APTX-209ENST00000460940 GDF11O95390 407 aa13.18□□□□□ -0.3
APTX-209ENST00000460940 CETPP11597 493 aa13.18□□□□□ -0.3
APTX-209ENST00000460940 CDK8P49336 464 aa13.18□□□□□ -0.3
APTX-209ENST00000460940 EVX2Q03828 476 aa13.18□□□□□ -0.3
APTX-209ENST00000460940 ABCB5Q2M3G0 1257 aa13.18□□□□□ -0.3
APTX-209ENST00000460940 DYNLL2Q96FJ2 89 aa13.18□□□□□ -0.3
APTX-209ENST00000460940 CCDC17Q96LX7 622 aa13.18□□□□□ -0.3
APTX-209ENST00000460940 ATAD5Q96QE3 1844 aa13.18□□□□□ -0.3
APTX-209ENST00000460940 DSCC1Q9BVC3 393 aa13.18□□□□□ -0.3
APTX-209ENST00000460940 CABP5Q9NP86 173 aa13.18□□□□□ -0.3
APTX-209ENST00000460940 SAGE1Q9NXZ1 904 aa13.18□□□□□ -0.3
APTX-209ENST00000460940 ZHX2Q9Y6X8 837 aa13.18□□□□□ -0.3
APTX-209ENST00000460940 PPARAQ07869 468 aa13.17□□□□□ -0.3
APTX-209ENST00000460940 NFKBIBQ15653 356 aa13.17□□□□□ -0.3
APTX-209ENST00000460940 SLC44A5Q8NCS7 719 aa13.17□□□□□ -0.3
APTX-209ENST00000460940 MS4A4AQ96JQ5 239 aa13.17□□□□□ -0.3
APTX-209ENST00000460940 WDR18Q9BV38 432 aa13.17□□□□□ -0.3
APTX-209ENST00000460940 ANAPC4Q9UJX5 808 aa13.17□□□□□ -0.3
APTX-209ENST00000460940 AFG3L2Q9Y4W6 797 aa13.17□□□□□ -0.3
APTX-209ENST00000460940 CCL15-CCL14A0A0B4J2E2 113 aa13.16□□□□□ -0.3
APTX-209ENST00000460940 SGSM2O43147 1006 aa13.16□□□□□ -0.3
APTX-209ENST00000460940 ALDH1A1P00352 501 aa13.16□□□□□ -0.3
APTX-209ENST00000460940 GH2P01242 217 aa13.16□□□□□ -0.3
APTX-209ENST00000460940 PDE4BQ07343 736 aa13.16□□□□□ -0.3
APTX-209ENST00000460940 CCL15Q16663 113 aa13.16□□□□□ -0.3
APTX-209ENST00000460940 OTUD7BQ6GQQ9 843 aa13.16□□□□□ -0.3
APTX-209ENST00000460940 CASC1Q6TDU7 716 aa13.16□□□□□ -0.3
APTX-209ENST00000460940 TMEM179Q6ZVK1 233 aa13.16□□□□□ -0.3
APTX-209ENST00000460940 ZNF280CQ8ND82 737 aa13.16□□□□□ -0.3
APTX-209ENST00000460940 CDC45O75419 566 aa13.16□□□□□ -0.3
APTX-209ENST00000460940 FGAP02671 866 aa13.16□□□□□ -0.3
APTX-209ENST00000460940 BRI3BPQ8WY22 251 aa13.16□□□□□ -0.3
APTX-209ENST00000460940 MKNK2Q9HBH9 465 aa13.16□□□□□ -0.3
APTX-209ENST00000460940 ZCCHC17Q9NP64 241 aaKnown RBP13.16□□□□□ -0.3
APTX-209ENST00000460940 CTNNA3Q9UI47 895 aa13.16□□□□□ -0.3
APTX-209ENST00000460940 PHIPQ8WWQ0 1821 aa13.15□□□□□ -0.3
APTX-209ENST00000460940 MYH8P13535 1937 aa13.15□□□□□ -0.3
APTX-209ENST00000460940 A0A0G2JLL6 359 aaPredicted RBP13.15□□□□□ -0.3
APTX-209ENST00000460940 HSPA1AP0DMV8 641 aaKnown RBP13.15□□□□□ -0.3
APTX-209ENST00000460940 HSPA1BP0DMV9 641 aaKnown RBP13.15□□□□□ -0.3
APTX-209ENST00000460940 JAG1P78504 1218 aa13.15□□□□□ -0.3
APTX-209ENST00000460940 PDE4CQ08493 712 aa13.15□□□□□ -0.3
APTX-209ENST00000460940 PRRT2Q7Z6L0 340 aaPredicted RBP13.15□□□□□ -0.3
APTX-209ENST00000460940 IFNL1Q8IU54 200 aa13.15□□□□□ -0.3
APTX-209ENST00000460940 TRIM75PA6NK02 468 aa13.14□□□□□ -0.31
APTX-209ENST00000460940 SMIM22K7EJ46 135 aa13.14□□□□□ -0.31
APTX-209ENST00000460940 MPHOSPH10O00566 681 aaKnown RBP13.14□□□□□ -0.31
APTX-209ENST00000460940 PCP11498 1178 aaKnown RBP13.14□□□□□ -0.31
APTX-209ENST00000460940 NT5C2P49902 561 aa13.14□□□□□ -0.31
APTX-209ENST00000460940 RAB3GAP1Q15042 981 aa13.14□□□□□ -0.31
APTX-209ENST00000460940 FASTKD5Q7L8L6 764 aaKnown RBP13.14□□□□□ -0.31
APTX-209ENST00000460940 IL25Q9H293 177 aa13.14□□□□□ -0.31
APTX-209ENST00000460940 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.14□□□□□ -0.31
APTX-209ENST00000460940 PLIN4Q96Q06 1357 aa13.14□□□□□ -0.31
APTX-209ENST00000460940 AKR1B1P15121 316 aa13.14□□□□□ -0.31
APTX-209ENST00000460940 RASA1P20936 1047 aa13.14□□□□□ -0.31
APTX-209ENST00000460940 SPP2Q13103 211 aa13.14□□□□□ -0.31
APTX-209ENST00000460940 SHROOM1Q2M3G4 852 aaPredicted RBP13.14□□□□□ -0.31
APTX-209ENST00000460940 CCDC84Q86UT8 332 aaPredicted RBP13.14□□□□□ -0.31
APTX-209ENST00000460940 ESYT1Q9BSJ8 1104 aa13.14□□□□□ -0.31
APTX-209ENST00000460940 CFHR5Q9BXR6 569 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms