RNA–Protein interactions for RNA: ENST00000460801.5

PTPRN-210, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 2

Gene PTPRN, Length 2,239 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-210ENST00000460801 TAOK2Q9UL54 1235 aa16.1■□□□□ 0.17
PTPRN-210ENST00000460801 MARCKSP29966 332 aaPredicted RBP16.1■□□□□ 0.17
PTPRN-210ENST00000460801 PLCB2Q00722 1185 aa16.1■□□□□ 0.17
PTPRN-210ENST00000460801 PDE4BQ07343 736 aa16.1■□□□□ 0.17
PTPRN-210ENST00000460801 RBM28Q9NW13 759 aaKnown RBP16.1■□□□□ 0.17
PTPRN-210ENST00000460801 MCM9Q9NXL9 1143 aa16.1■□□□□ 0.17
PTPRN-210ENST00000460801 KCNJ14Q9UNX9 436 aa16.1■□□□□ 0.17
PTPRN-210ENST00000460801 LDHCP07864 332 aa16.09■□□□□ 0.17
PTPRN-210ENST00000460801 NT5C2P49902 561 aa16.09■□□□□ 0.17
PTPRN-210ENST00000460801 C12orf60Q5U649 245 aa16.09■□□□□ 0.17
PTPRN-210ENST00000460801 SDF4Q9BRK5 362 aa16.09■□□□□ 0.17
PTPRN-210ENST00000460801 PRPF3O43395 683 aaKnown RBP16.09■□□□□ 0.17
PTPRN-210ENST00000460801 BAG3O95817 575 aa16.09■□□□□ 0.17
PTPRN-210ENST00000460801 USP17L8P0C7I0 530 aa16.09■□□□□ 0.17
PTPRN-210ENST00000460801 PFKFB1P16118 471 aa16.09■□□□□ 0.17
PTPRN-210ENST00000460801 IQCB1Q15051 598 aa16.09■□□□□ 0.17
PTPRN-210ENST00000460801 DIXDC1Q155Q3 683 aa16.09■□□□□ 0.17
PTPRN-210ENST00000460801 PKN1Q16512 942 aa16.09■□□□□ 0.17
PTPRN-210ENST00000460801 SH3RF3Q8TEJ3 882 aaPredicted RBP16.09■□□□□ 0.17
PTPRN-210ENST00000460801 FAM237AA0A1B0GTK4 181 aa16.08■□□□□ 0.16
PTPRN-210ENST00000460801 ZNF202O95125 648 aa16.08■□□□□ 0.16
PTPRN-210ENST00000460801 USP5P45974 858 aa16.08■□□□□ 0.16
PTPRN-210ENST00000460801 TOB1P50616 345 aaPredicted RBP16.08■□□□□ 0.16
PTPRN-210ENST00000460801 FAM47AQ5JRC9 791 aa16.08■□□□□ 0.16
PTPRN-210ENST00000460801 C11orf57Q6ZUT1 292 aaPredicted RBP16.08■□□□□ 0.16
PTPRN-210ENST00000460801 POLLQ9UGP5 575 aa16.08■□□□□ 0.16
PTPRN-210ENST00000460801 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.08■□□□□ 0.16
PTPRN-210ENST00000460801 MROH7-TTC4A0A0A0MT08 1334 aa16.08■□□□□ 0.16
PTPRN-210ENST00000460801 NMT2O60551 498 aa16.07■□□□□ 0.16
PTPRN-210ENST00000460801 TBC1D16Q8TBP0 767 aa16.07■□□□□ 0.16
PTPRN-210ENST00000460801 ANO10Q9NW15 660 aa16.07■□□□□ 0.16
PTPRN-210ENST00000460801 HPSEQ9Y251 543 aa16.07■□□□□ 0.16
PTPRN-210ENST00000460801 LRRC37AA6NMS7 1700 aa16.07■□□□□ 0.16
PTPRN-210ENST00000460801 ROBO3Q96MS0 1386 aa16.07■□□□□ 0.16
PTPRN-210ENST00000460801 PLEKHA8P1O95397 391 aa16.07■□□□□ 0.16
PTPRN-210ENST00000460801 AKAP17AQ02040 695 aaKnown RBP16.07■□□□□ 0.16
PTPRN-210ENST00000460801 RILPL1Q5EBL4 403 aa16.07■□□□□ 0.16
PTPRN-210ENST00000460801 SHC4Q6S5L8 630 aa16.07■□□□□ 0.16
PTPRN-210ENST00000460801 TMTC3Q6ZXV5 915 aa16.07■□□□□ 0.16
PTPRN-210ENST00000460801 TMC4Q7Z404 712 aa16.07■□□□□ 0.16
PTPRN-210ENST00000460801 SHISA4Q96DD7 197 aa16.07■□□□□ 0.16
PTPRN-210ENST00000460801 TIGD1Q96MW7 591 aa16.07■□□□□ 0.16
PTPRN-210ENST00000460801 RTFDC1Q9BY42 306 aaPredicted RBP16.07■□□□□ 0.16
PTPRN-210ENST00000460801 KIAA1468Q9P260 1216 aa16.07■□□□□ 0.16
PTPRN-210ENST00000460801 LTBP1Q14766 1721 aa16.07■□□□□ 0.16
PTPRN-210ENST00000460801 CUTAO60888 179 aa16.06■□□□□ 0.16
PTPRN-210ENST00000460801 RCSD1Q6JBY9 416 aa16.06■□□□□ 0.16
PTPRN-210ENST00000460801 CERS3Q8IU89 383 aa16.06■□□□□ 0.16
PTPRN-210ENST00000460801 NOL10Q9BSC4 688 aaKnown RBP16.06■□□□□ 0.16
PTPRN-210ENST00000460801 TSPY2A6NKD2 308 aa16.06■□□□□ 0.16
PTPRN-210ENST00000460801 XBP1P17861 261 aa16.06■□□□□ 0.16
PTPRN-210ENST00000460801 NR5A1Q13285 461 aa16.06■□□□□ 0.16
PTPRN-210ENST00000460801 RESP18Q5W5W9 173 aa16.06■□□□□ 0.16
PTPRN-210ENST00000460801 PHF20Q9BVI0 1012 aa16.06■□□□□ 0.16
PTPRN-210ENST00000460801 V9GY48 417 aaPredicted RBP16.06■□□□□ 0.16
PTPRN-210ENST00000460801 ANKRD31Q8N7Z5 1873 aa16.05■□□□□ 0.16
PTPRN-210ENST00000460801 PLSCR1O15162 318 aa16.05■□□□□ 0.16
PTPRN-210ENST00000460801 SP8Q8IXZ3 490 aa16.05■□□□□ 0.16
PTPRN-210ENST00000460801 OXER1Q8TDS5 423 aa16.05■□□□□ 0.16
PTPRN-210ENST00000460801 ERCC4Q92889 916 aaPredicted RBP16.05■□□□□ 0.16
PTPRN-210ENST00000460801 NAV1Q8NEY1 1877 aa16.05■□□□□ 0.16
PTPRN-210ENST00000460801 GPR75-ASB3A0A0A6YYF3 556 aa16.04■□□□□ 0.16
PTPRN-210ENST00000460801 ZNF827Q17R98 1081 aa16.04■□□□□ 0.16
PTPRN-210ENST00000460801 PLA2G4DQ86XP0 818 aa16.04■□□□□ 0.16
PTPRN-210ENST00000460801 DGKHQ86XP1 1220 aa16.04■□□□□ 0.16
PTPRN-210ENST00000460801 MPNDQ8N594 471 aa16.04■□□□□ 0.16
PTPRN-210ENST00000460801 CTCFLQ8NI51 663 aaPredicted RBP16.04■□□□□ 0.16
PTPRN-210ENST00000460801 ANKS1AQ92625 1134 aa16.04■□□□□ 0.16
PTPRN-210ENST00000460801 AKT1S1Q96B36 256 aa16.04■□□□□ 0.16
PTPRN-210ENST00000460801 FAM163AQ96GL9 167 aaPredicted RBP16.04■□□□□ 0.16
PTPRN-210ENST00000460801 CLIC6Q96NY7 704 aa16.04■□□□□ 0.16
PTPRN-210ENST00000460801 CDK5RAP2Q96SN8 1893 aa16.04■□□□□ 0.16
PTPRN-210ENST00000460801 CNTNAP5Q8WYK1 1306 aa16.04■□□□□ 0.16
PTPRN-210ENST00000460801 NRXN2Q9P2S2 1712 aa16.04■□□□□ 0.16
PTPRN-210ENST00000460801 SYKP43405 635 aa16.04■□□□□ 0.16
PTPRN-210ENST00000460801 TFAP4Q01664 338 aa16.04■□□□□ 0.16
PTPRN-210ENST00000460801 NLGN1Q8N2Q7 840 aa16.04■□□□□ 0.16
PTPRN-210ENST00000460801 SRBD1Q8N5C6 995 aaKnown RBP16.04■□□□□ 0.16
PTPRN-210ENST00000460801 KRI1Q8N9T8 703 aaKnown RBP16.04■□□□□ 0.16
PTPRN-210ENST00000460801 TGFBRAP1Q8WUH2 860 aa16.04■□□□□ 0.16
PTPRN-210ENST00000460801 DYNLL2Q96FJ2 89 aa16.04■□□□□ 0.16
PTPRN-210ENST00000460801 VPS54Q9P1Q0 977 aa16.04■□□□□ 0.16
PTPRN-210ENST00000460801 A0A087WWV3 80 aa16.03■□□□□ 0.16
PTPRN-210ENST00000460801 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.03■□□□□ 0.16
PTPRN-210ENST00000460801 PPEF1O14829 653 aaPredicted RBP16.03■□□□□ 0.16
PTPRN-210ENST00000460801 OFD1O75665 1012 aa16.03■□□□□ 0.16
PTPRN-210ENST00000460801 BTDP43251 543 aa16.03■□□□□ 0.16
PTPRN-210ENST00000460801 ZNF75DP51815 510 aa16.03■□□□□ 0.16
PTPRN-210ENST00000460801 RBM6P78332 1123 aaKnown RBP16.03■□□□□ 0.16
PTPRN-210ENST00000460801 SLC4A8Q2Y0W8 1093 aa16.03■□□□□ 0.16
PTPRN-210ENST00000460801 COL23A1Q86Y22 540 aaPredicted RBP16.03■□□□□ 0.16
PTPRN-210ENST00000460801 AMOTL1Q8IY63 956 aa16.03■□□□□ 0.16
PTPRN-210ENST00000460801 CEP57L1Q8IYX8 460 aa16.03■□□□□ 0.16
PTPRN-210ENST00000460801 TBC1D22AQ8WUA7 517 aa16.03■□□□□ 0.16
PTPRN-210ENST00000460801 IL17RBQ9NRM6 502 aa16.03■□□□□ 0.16
PTPRN-210ENST00000460801 FAM205AQ6ZU69 1335 aa16.03■□□□□ 0.16
PTPRN-210ENST00000460801 hCG_1642624A0A1W2PR95 340 aa16.03■□□□□ 0.16
PTPRN-210ENST00000460801 C6orf229H3BNL8 230 aa16.03■□□□□ 0.16
PTPRN-210ENST00000460801 TPM3P06753 285 aa16.03■□□□□ 0.16
PTPRN-210ENST00000460801 PTPREP23469 700 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms