RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 INHBEP58166 350 aa26.78■■□□□ 1.88
C9orf3-209ENST00000460573 TATDN1Q6P1N9 297 aa26.78■■□□□ 1.88
C9orf3-209ENST00000460573 DNAJC18Q9H819 358 aa26.78■■□□□ 1.88
C9orf3-209ENST00000460573 GINM1Q9NU53 330 aa26.78■■□□□ 1.88
C9orf3-209ENST00000460573 BAZ2AQ9UIF9 1905 aaKnown RBP26.78■■□□□ 1.88
C9orf3-209ENST00000460573 FAM196BA6NMK8 535 aa26.77■■□□□ 1.88
C9orf3-209ENST00000460573 OTUD7BQ6GQQ9 843 aa26.77■■□□□ 1.88
C9orf3-209ENST00000460573 ZKSCAN4Q969J2 545 aaPredicted RBP26.77■■□□□ 1.88
C9orf3-209ENST00000460573 MINDY4BA8MYZ0 360 aa26.76■■□□□ 1.87
C9orf3-209ENST00000460573 FGAP02671 866 aa26.76■■□□□ 1.87
C9orf3-209ENST00000460573 SLURP2P0DP57 97 aa26.76■■□□□ 1.87
C9orf3-209ENST00000460573 CTU1Q7Z7A3 348 aaKnown RBP26.76■■□□□ 1.87
C9orf3-209ENST00000460573 SCYL3Q8IZE3 742 aa26.76■■□□□ 1.87
C9orf3-209ENST00000460573 ELP3Q9H9T3 547 aa26.76■■□□□ 1.87
C9orf3-209ENST00000460573 SNCAIPQ9Y6H5 919 aa26.76■■□□□ 1.87
C9orf3-209ENST00000460573 ROBO3Q96MS0 1386 aa26.75■■□□□ 1.87
C9orf3-209ENST00000460573 CYP2D7A0A087X1C5 515 aa26.75■■□□□ 1.87
C9orf3-209ENST00000460573 SLC3A2P08195 630 aaKnown RBP26.75■■□□□ 1.87
C9orf3-209ENST00000460573 CAP2P40123 477 aa26.75■■□□□ 1.87
C9orf3-209ENST00000460573 C16orf86Q6ZW13 317 aa26.75■■□□□ 1.87
C9orf3-209ENST00000460573 ESYT1Q9BSJ8 1104 aa26.75■■□□□ 1.87
C9orf3-209ENST00000460573 IL25Q9H293 177 aa26.75■■□□□ 1.87
C9orf3-209ENST00000460573 ZNF287Q9HBT7 754 aa26.75■■□□□ 1.87
C9orf3-209ENST00000460573 PICK1Q9NRD5 415 aa26.75■■□□□ 1.87
C9orf3-209ENST00000460573 OTOFQ9HC10 1997 aa26.75■■□□□ 1.87
C9orf3-209ENST00000460573 PPARAQ07869 468 aa26.74■■□□□ 1.87
C9orf3-209ENST00000460573 ERO1BQ86YB8 467 aa26.74■■□□□ 1.87
C9orf3-209ENST00000460573 CTNNA3Q9UI47 895 aa26.74■■□□□ 1.87
C9orf3-209ENST00000460573 SHMT1P34896 483 aa26.73■■□□□ 1.87
C9orf3-209ENST00000460573 CDK8P49336 464 aa26.73■■□□□ 1.87
C9orf3-209ENST00000460573 CERKLQ49MI3 558 aaPredicted RBP26.73■■□□□ 1.87
C9orf3-209ENST00000460573 ZNF296Q8WUU4 475 aaPredicted RBP26.73■■□□□ 1.87
C9orf3-209ENST00000460573 DYNLL2Q96FJ2 89 aa26.73■■□□□ 1.87
C9orf3-209ENST00000460573 ANAPC4Q9UJX5 808 aa26.73■■□□□ 1.87
C9orf3-209ENST00000460573 SPDYE5A6NIY4 337 aa26.72■■□□□ 1.87
C9orf3-209ENST00000460573 GPR25O00155 361 aa26.72■■□□□ 1.87
C9orf3-209ENST00000460573 EVX2Q03828 476 aa26.72■■□□□ 1.87
C9orf3-209ENST00000460573 PPATQ06203 517 aa26.72■■□□□ 1.87
C9orf3-209ENST00000460573 KIAA1211Q6ZU35 1233 aa26.72■■□□□ 1.87
C9orf3-209ENST00000460573 OPTNQ96CV9 577 aa26.72■■□□□ 1.87
C9orf3-209ENST00000460573 ASNSP08243 561 aa26.71■■□□□ 1.87
C9orf3-209ENST00000460573 PDE4BQ07343 736 aa26.71■■□□□ 1.87
C9orf3-209ENST00000460573 IFNL1Q8IU54 200 aa26.71■■□□□ 1.87
C9orf3-209ENST00000460573 CCDC17Q96LX7 622 aa26.71■■□□□ 1.87
C9orf3-209ENST00000460573 TBC1D2Q9BYX2 928 aa26.71■■□□□ 1.87
C9orf3-209ENST00000460573 CABP5Q9NP86 173 aa26.71■■□□□ 1.87
C9orf3-209ENST00000460573 LAMB1P07942 1786 aa26.71■■□□□ 1.87
C9orf3-209ENST00000460573 FKTNO75072 461 aa26.7■■□□□ 1.86
C9orf3-209ENST00000460573 PTPRAP18433 802 aa26.7■■□□□ 1.86
C9orf3-209ENST00000460573 RRP1BQ14684 758 aaKnown RBP26.7■■□□□ 1.86
C9orf3-209ENST00000460573 ABCB5Q2M3G0 1257 aa26.69■■□□□ 1.86
C9orf3-209ENST00000460573 MKNK2Q9HBH9 465 aa26.69■■□□□ 1.86
C9orf3-209ENST00000460573 DOCK1Q14185 1865 aa26.68■■□□□ 1.86
C9orf3-209ENST00000460573 SMIM22K7EJ46 135 aa26.68■■□□□ 1.86
C9orf3-209ENST00000460573 ZNF213O14771 459 aa26.68■■□□□ 1.86
C9orf3-209ENST00000460573 PPIL2Q13356 520 aa26.68■■□□□ 1.86
C9orf3-209ENST00000460573 PKN2Q16513 984 aaKnown RBP26.68■■□□□ 1.86
C9orf3-209ENST00000460573 IMMTQ16891 758 aaKnown RBP26.68■■□□□ 1.86
C9orf3-209ENST00000460573 SLC44A5Q8NCS7 719 aa26.68■■□□□ 1.86
C9orf3-209ENST00000460573 OTUD5Q96G74 571 aa26.68■■□□□ 1.86
C9orf3-209ENST00000460573 U3KPZ7 1027 aaPredicted RBP26.68■■□□□ 1.86
C9orf3-209ENST00000460573 USP17L5A8MUK1 530 aa26.67■■□□□ 1.86
C9orf3-209ENST00000460573 GDF11O95390 407 aa26.67■■□□□ 1.86
C9orf3-209ENST00000460573 PCP11498 1178 aaKnown RBP26.67■■□□□ 1.86
C9orf3-209ENST00000460573 MAP4K1Q92918 833 aa26.67■■□□□ 1.86
C9orf3-209ENST00000460573 AS3MTQ9HBK9 375 aa26.67■■□□□ 1.86
C9orf3-209ENST00000460573 ZBTB21Q9ULJ3 1066 aa26.67■■□□□ 1.86
C9orf3-209ENST00000460573 PTH1RQ03431 593 aa26.66■■□□□ 1.86
C9orf3-209ENST00000460573 NOM1Q5C9Z4 860 aaKnown RBP26.66■■□□□ 1.86
C9orf3-209ENST00000460573 ZNF444Q8N0Y2 327 aaPredicted RBP26.66■■□□□ 1.86
C9orf3-209ENST00000460573 ZHX2Q9Y6X8 837 aa26.66■■□□□ 1.86
C9orf3-209ENST00000460573 GH2P01242 217 aa26.65■■□□□ 1.86
C9orf3-209ENST00000460573 FGRP09769 529 aa26.65■■□□□ 1.86
C9orf3-209ENST00000460573 GJA5P36382 358 aa26.65■■□□□ 1.86
C9orf3-209ENST00000460573 GTF2A2P52657 109 aa26.65■■□□□ 1.86
C9orf3-209ENST00000460573 MLLT1Q03111 559 aaPredicted RBP26.65■■□□□ 1.86
C9orf3-209ENST00000460573 CTDSPL2Q05D32 466 aa26.65■■□□□ 1.86
C9orf3-209ENST00000460573 TMEM179Q6ZVK1 233 aa26.65■■□□□ 1.86
C9orf3-209ENST00000460573 CNKSR2Q8WXI2 1034 aa26.65■■□□□ 1.86
C9orf3-209ENST00000460573 CFHR5Q9BXR6 569 aa26.65■■□□□ 1.86
C9orf3-209ENST00000460573 LSG1Q9H089 658 aaKnown RBP26.65■■□□□ 1.86
C9orf3-209ENST00000460573 RNF41Q9H4P4 317 aaPredicted RBP26.65■■□□□ 1.86
C9orf3-209ENST00000460573 ANO2Q9NQ90 1003 aa26.65■■□□□ 1.86
C9orf3-209ENST00000460573 IGF2BP3O00425 579 aaKnown RBP eCLIP26.64■■□□□ 1.86
C9orf3-209ENST00000460573 CXCL11O14625 94 aa26.64■■□□□ 1.86
C9orf3-209ENST00000460573 RASA1P20936 1047 aa26.64■■□□□ 1.86
C9orf3-209ENST00000460573 NT5C2P49902 561 aa26.64■■□□□ 1.86
C9orf3-209ENST00000460573 STK11IPQ8N1F8 1099 aa26.64■■□□□ 1.86
C9orf3-209ENST00000460573 KCNH4Q9UQ05 1017 aa26.64■■□□□ 1.86
C9orf3-209ENST00000460573 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.64■■□□□ 1.86
C9orf3-209ENST00000460573 AFG3L2Q9Y4W6 797 aa26.64■■□□□ 1.86
C9orf3-209ENST00000460573 ATAD5Q96QE3 1844 aa26.63■■□□□ 1.85
C9orf3-209ENST00000460573 MPHOSPH10O00566 681 aaKnown RBP26.63■■□□□ 1.85
C9orf3-209ENST00000460573 IRF6O14896 467 aa26.63■■□□□ 1.85
C9orf3-209ENST00000460573 ORC4O43929 436 aa26.63■■□□□ 1.85
C9orf3-209ENST00000460573 JAG1P78504 1218 aa26.63■■□□□ 1.85
C9orf3-209ENST00000460573 SNAPC2Q13487 334 aa26.63■■□□□ 1.85
C9orf3-209ENST00000460573 STAG1Q8WVM7 1258 aa26.63■■□□□ 1.85
C9orf3-209ENST00000460573 WDR18Q9BV38 432 aa26.63■■□□□ 1.85
C9orf3-209ENST00000460573 MYH8P13535 1937 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms