RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 SNCAIPQ9Y6H5 919 aa12.94□□□□□ -0.34
CCDC12-204ENST00000460035 MPHOSPH10O00566 681 aaKnown RBP12.93□□□□□ -0.34
CCDC12-204ENST00000460035 SGSM2O43147 1006 aa12.93□□□□□ -0.34
CCDC12-204ENST00000460035 GDF11O95390 407 aa12.93□□□□□ -0.34
CCDC12-204ENST00000460035 KIF23Q02241 960 aaPredicted RBP12.93□□□□□ -0.34
CCDC12-204ENST00000460035 PPARAQ07869 468 aa12.93□□□□□ -0.34
CCDC12-204ENST00000460035 TATDN1Q6P1N9 297 aa12.93□□□□□ -0.34
CCDC12-204ENST00000460035 ZIC5Q96T25 663 aa12.93□□□□□ -0.34
CCDC12-204ENST00000460035 IL25Q9H293 177 aa12.93□□□□□ -0.34
CCDC12-204ENST00000460035 CABP5Q9NP86 173 aa12.93□□□□□ -0.34
CCDC12-204ENST00000460035 GINM1Q9NU53 330 aa12.93□□□□□ -0.34
CCDC12-204ENST00000460035 ZHX2Q9Y6X8 837 aa12.93□□□□□ -0.34
CCDC12-204ENST00000460035 CEP350Q5VT06 3117 aa12.92□□□□□ -0.34
CCDC12-204ENST00000460035 SPDYE5A6NIY4 337 aa12.92□□□□□ -0.34
CCDC12-204ENST00000460035 ZBTB48P10074 688 aaPredicted RBP12.92□□□□□ -0.34
CCDC12-204ENST00000460035 PTPRAP18433 802 aa12.92□□□□□ -0.34
CCDC12-204ENST00000460035 SHMT1P34896 483 aa12.92□□□□□ -0.34
CCDC12-204ENST00000460035 MAP2K2P36507 400 aa12.92□□□□□ -0.34
CCDC12-204ENST00000460035 CTDSPL2Q05D32 466 aa12.92□□□□□ -0.34
CCDC12-204ENST00000460035 PPATQ06203 517 aa12.92□□□□□ -0.34
CCDC12-204ENST00000460035 ABCB5Q2M3G0 1257 aa12.92□□□□□ -0.34
CCDC12-204ENST00000460035 C16orf86Q6ZW13 317 aa12.92□□□□□ -0.34
CCDC12-204ENST00000460035 ESYT1Q9BSJ8 1104 aa12.92□□□□□ -0.34
CCDC12-204ENST00000460035 DSCC1Q9BVC3 393 aa12.92□□□□□ -0.34
CCDC12-204ENST00000460035 ZNF287Q9HBT7 754 aa12.92□□□□□ -0.34
CCDC12-204ENST00000460035 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.92□□□□□ -0.34
CCDC12-204ENST00000460035 CTNNA3Q9UI47 895 aa12.92□□□□□ -0.34
CCDC12-204ENST00000460035 PARP14Q460N5 1801 aa12.92□□□□□ -0.34
CCDC12-204ENST00000460035 GH2P01242 217 aa12.91□□□□□ -0.34
CCDC12-204ENST00000460035 ASNSP08243 561 aa12.91□□□□□ -0.34
CCDC12-204ENST00000460035 GJA5P36382 358 aa12.91□□□□□ -0.34
CCDC12-204ENST00000460035 HAND2P61296 217 aa12.91□□□□□ -0.34
CCDC12-204ENST00000460035 JAG1P78504 1218 aa12.91□□□□□ -0.34
CCDC12-204ENST00000460035 PDE4BQ07343 736 aa12.91□□□□□ -0.34
CCDC12-204ENST00000460035 RAB3GAP1Q15042 981 aa12.91□□□□□ -0.34
CCDC12-204ENST00000460035 SHROOM1Q2M3G4 852 aaPredicted RBP12.91□□□□□ -0.34
CCDC12-204ENST00000460035 CCDC84Q86UT8 332 aaPredicted RBP12.91□□□□□ -0.34
CCDC12-204ENST00000460035 ZNF444Q8N0Y2 327 aaPredicted RBP12.91□□□□□ -0.34
CCDC12-204ENST00000460035 TOMM22Q9NS69 142 aa12.91□□□□□ -0.34
CCDC12-204ENST00000460035 ANAPC4Q9UJX5 808 aa12.91□□□□□ -0.34
CCDC12-204ENST00000460035 USP17L5A8MUK1 530 aa12.9□□□□□ -0.34
CCDC12-204ENST00000460035 ZNF213O14771 459 aa12.9□□□□□ -0.34
CCDC12-204ENST00000460035 IRF6O14896 467 aa12.9□□□□□ -0.34
CCDC12-204ENST00000460035 PRDM1O75626 825 aa12.9□□□□□ -0.34
CCDC12-204ENST00000460035 GTF2A2P52657 109 aa12.9□□□□□ -0.34
CCDC12-204ENST00000460035 PTH1RQ03431 593 aa12.9□□□□□ -0.34
CCDC12-204ENST00000460035 PPIL2Q13356 520 aa12.9□□□□□ -0.34
CCDC12-204ENST00000460035 CCDC17Q96LX7 622 aa12.9□□□□□ -0.34
CCDC12-204ENST00000460035 TBC1D2Q9BYX2 928 aa12.9□□□□□ -0.34
CCDC12-204ENST00000460035 INCENPQ9NQS7 918 aa12.9□□□□□ -0.34
CCDC12-204ENST00000460035 ZBTB21Q9ULJ3 1066 aa12.9□□□□□ -0.34
CCDC12-204ENST00000460035 MANSC4A6NHS7 340 aaPredicted RBP12.89□□□□□ -0.35
CCDC12-204ENST00000460035 TRIM75PA6NK02 468 aa12.89□□□□□ -0.35
CCDC12-204ENST00000460035 AKR1B1P15121 316 aa12.89□□□□□ -0.35
CCDC12-204ENST00000460035 SPP2Q13103 211 aa12.89□□□□□ -0.35
CCDC12-204ENST00000460035 SNAPC2Q13487 334 aa12.89□□□□□ -0.35
CCDC12-204ENST00000460035 IMMTQ16891 758 aaKnown RBP12.89□□□□□ -0.35
CCDC12-204ENST00000460035 REM2Q8IYK8 340 aaPredicted RBP12.89□□□□□ -0.35
CCDC12-204ENST00000460035 JMYQ8N9B5 988 aa12.89□□□□□ -0.35
CCDC12-204ENST00000460035 AS3MTQ9HBK9 375 aa12.89□□□□□ -0.35
CCDC12-204ENST00000460035 ANO2Q9NQ90 1003 aa12.89□□□□□ -0.35
CCDC12-204ENST00000460035 U3KPZ7 1027 aaPredicted RBP12.89□□□□□ -0.35
CCDC12-204ENST00000460035 CCL15-CCL14A0A0B4J2E2 113 aa12.88□□□□□ -0.35
CCDC12-204ENST00000460035 CXCL11O14625 94 aa12.88□□□□□ -0.35
CCDC12-204ENST00000460035 RANBP6O60518 1105 aaKnown RBP12.88□□□□□ -0.35
CCDC12-204ENST00000460035 CETPP11597 493 aa12.88□□□□□ -0.35
CCDC12-204ENST00000460035 RASA1P20936 1047 aa12.88□□□□□ -0.35
CCDC12-204ENST00000460035 INHBEP58166 350 aa12.88□□□□□ -0.35
CCDC12-204ENST00000460035 MAP2K1Q02750 393 aaPredicted RBP12.88□□□□□ -0.35
CCDC12-204ENST00000460035 SREBF2Q12772 1141 aa12.88□□□□□ -0.35
CCDC12-204ENST00000460035 SEPT2Q15019 361 aa12.88□□□□□ -0.35
CCDC12-204ENST00000460035 CCL15Q16663 113 aa12.88□□□□□ -0.35
CCDC12-204ENST00000460035 RRP12Q5JTH9 1297 aaKnown RBP12.88□□□□□ -0.35
CCDC12-204ENST00000460035 MFSD6Q6ZSS7 791 aa12.88□□□□□ -0.35
CCDC12-204ENST00000460035 TMEM179Q6ZVK1 233 aa12.88□□□□□ -0.35
CCDC12-204ENST00000460035 ZNF280CQ8ND82 737 aa12.88□□□□□ -0.35
CCDC12-204ENST00000460035 BEGAINQ9BUH8 593 aa12.88□□□□□ -0.35
CCDC12-204ENST00000460035 KCNH4Q9UQ05 1017 aa12.88□□□□□ -0.35
CCDC12-204ENST00000460035 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.88□□□□□ -0.35
CCDC12-204ENST00000460035 AFG3L2Q9Y4W6 797 aa12.88□□□□□ -0.35
CCDC12-204ENST00000460035 RLFQ13129 1914 aa12.88□□□□□ -0.35
CCDC12-204ENST00000460035 PLIN4Q96Q06 1357 aa12.87□□□□□ -0.35
CCDC12-204ENST00000460035 ORC4O43929 436 aa12.87□□□□□ -0.35
CCDC12-204ENST00000460035 FGRP09769 529 aa12.87□□□□□ -0.35
CCDC12-204ENST00000460035 TSPY3P0CV98 308 aa12.87□□□□□ -0.35
CCDC12-204ENST00000460035 TSPY8P0CW00 308 aa12.87□□□□□ -0.35
CCDC12-204ENST00000460035 PCP11498 1178 aaKnown RBP12.87□□□□□ -0.35
CCDC12-204ENST00000460035 TM4SF4P48230 202 aa12.87□□□□□ -0.35
CCDC12-204ENST00000460035 TFAP4Q01664 338 aa12.87□□□□□ -0.35
CCDC12-204ENST00000460035 ATP2B2Q01814 1243 aa12.87□□□□□ -0.35
CCDC12-204ENST00000460035 FAM47AQ5JRC9 791 aa12.87□□□□□ -0.35
CCDC12-204ENST00000460035 AKNAD1Q5T1N1 836 aa12.87□□□□□ -0.35
CCDC12-204ENST00000460035 GADL1Q6ZQY3 521 aa12.87□□□□□ -0.35
CCDC12-204ENST00000460035 MAP4K1Q92918 833 aa12.87□□□□□ -0.35
CCDC12-204ENST00000460035 MS4A4AQ96JQ5 239 aa12.87□□□□□ -0.35
CCDC12-204ENST00000460035 WDR18Q9BV38 432 aa12.87□□□□□ -0.35
CCDC12-204ENST00000460035 NBPF3Q9H094 633 aa12.87□□□□□ -0.35
CCDC12-204ENST00000460035 RNF41Q9H4P4 317 aaPredicted RBP12.87□□□□□ -0.35
CCDC12-204ENST00000460035 CASP8AP2Q9UKL3 1982 aa12.87□□□□□ -0.35
CCDC12-204ENST00000460035 TESPA1A2RU30 521 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms