RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 PCDHAC2Q9Y5I4 1007 aa7.13□□□□□ -1.27
VPS8-214ENST00000458721 SNCAIPQ9Y6H5 919 aa7.13□□□□□ -1.27
VPS8-214ENST00000458721 AOX1Q06278 1338 aa7.12□□□□□ -1.27
VPS8-214ENST00000458721 ADGRA2Q96PE1 1338 aa7.12□□□□□ -1.27
VPS8-214ENST00000458721 SNAP23O00161 211 aa7.12□□□□□ -1.27
VPS8-214ENST00000458721 TNFRSF10AO00220 468 aa7.12□□□□□ -1.27
VPS8-214ENST00000458721 VAMP4O75379 141 aa7.12□□□□□ -1.27
VPS8-214ENST00000458721 HOXD10P28358 340 aa7.12□□□□□ -1.27
VPS8-214ENST00000458721 MMP16P51512 607 aa7.12□□□□□ -1.27
VPS8-214ENST00000458721 AMHR2Q16671 573 aa7.12□□□□□ -1.27
VPS8-214ENST00000458721 RABL6Q3YEC7 729 aaPredicted RBP7.12□□□□□ -1.27
VPS8-214ENST00000458721 HHIPL2Q6UWX4 724 aa7.12□□□□□ -1.27
VPS8-214ENST00000458721 FBXO33Q7Z6M2 555 aa7.12□□□□□ -1.27
VPS8-214ENST00000458721 ANKRD23Q86SG2 305 aa7.12□□□□□ -1.27
VPS8-214ENST00000458721 VPS37DQ86XT2 251 aa7.12□□□□□ -1.27
VPS8-214ENST00000458721 HLA-CQ95604 372 aa7.12□□□□□ -1.27
VPS8-214ENST00000458721 FAM84BQ96KN1 310 aaPredicted RBP7.12□□□□□ -1.27
VPS8-214ENST00000458721 WRNIP1Q96S55 665 aa7.12□□□□□ -1.27
VPS8-214ENST00000458721 HTATIP2Q9BUP3 242 aa7.12□□□□□ -1.27
VPS8-214ENST00000458721 TDRD3Q9H7E2 651 aaKnown RBP7.12□□□□□ -1.27
VPS8-214ENST00000458721 C9orf78Q9NZ63 289 aaPredicted RBP7.12□□□□□ -1.27
VPS8-214ENST00000458721 LOC285556D6RIA3 1793 aa7.11□□□□□ -1.27
VPS8-214ENST00000458721 SZT2Q5T011 3432 aa7.11□□□□□ -1.27
VPS8-214ENST00000458721 TCP10L2B9ZVM9 353 aa7.11□□□□□ -1.27
VPS8-214ENST00000458721 ZBTB24O43167 697 aaPredicted RBP7.11□□□□□ -1.27
VPS8-214ENST00000458721 DGAT1O75907 488 aa7.11□□□□□ -1.27
VPS8-214ENST00000458721 SSTR3P32745 418 aaPredicted RBP7.11□□□□□ -1.27
VPS8-214ENST00000458721 CAP1Q01518 475 aa7.11□□□□□ -1.27
VPS8-214ENST00000458721 NOL9Q5SY16 702 aaKnown RBP7.11□□□□□ -1.27
VPS8-214ENST00000458721 C17orf99Q6UX52 265 aa7.11□□□□□ -1.27
VPS8-214ENST00000458721 PARK7Q99497 189 aaKnown RBP7.11□□□□□ -1.27
VPS8-214ENST00000458721 REPIN1Q9BWE0 567 aaKnown RBP7.11□□□□□ -1.27
VPS8-214ENST00000458721 ZNF341Q9BYN7 854 aa7.11□□□□□ -1.27
VPS8-214ENST00000458721 SRCIN1Q9C0H9 1055 aa7.11□□□□□ -1.27
VPS8-214ENST00000458721 SRRDQ9UH36 339 aa7.11□□□□□ -1.27
VPS8-214ENST00000458721 KCNH4Q9UQ05 1017 aa7.11□□□□□ -1.27
VPS8-214ENST00000458721 RIPOR2Q9Y4F9 1068 aa7.11□□□□□ -1.27
VPS8-214ENST00000458721 AK9Q5TCS8 1911 aa7.11□□□□□ -1.27
VPS8-214ENST00000458721 BTBD19C9JJ37 291 aa7.1□□□□□ -1.27
VPS8-214ENST00000458721 FRAT2O75474 233 aaPredicted RBP7.1□□□□□ -1.27
VPS8-214ENST00000458721 DXOO77932 396 aaKnown RBP7.1□□□□□ -1.27
VPS8-214ENST00000458721 PDE8BO95263 885 aa7.1□□□□□ -1.27
VPS8-214ENST00000458721 GJB1P08034 283 aa7.1□□□□□ -1.27
VPS8-214ENST00000458721 GRK4P32298 578 aa7.1□□□□□ -1.27
VPS8-214ENST00000458721 GYG1P46976 350 aa7.1□□□□□ -1.27
VPS8-214ENST00000458721 GJA8P48165 433 aa7.1□□□□□ -1.27
VPS8-214ENST00000458721 UBXN2AP68543 259 aa7.1□□□□□ -1.27
VPS8-214ENST00000458721 PUM3Q15397 648 aaKnown RBP7.1□□□□□ -1.27
VPS8-214ENST00000458721 EPHA10Q5JZY3 1008 aa7.1□□□□□ -1.27
VPS8-214ENST00000458721 UBE2Q1Q7Z7E8 422 aa7.1□□□□□ -1.27
VPS8-214ENST00000458721 VGLL2Q8N8G2 317 aa7.1□□□□□ -1.27
VPS8-214ENST00000458721 WDR66Q8TBY9 1149 aa7.1□□□□□ -1.27
VPS8-214ENST00000458721 SHISA4Q96DD7 197 aa7.1□□□□□ -1.27
VPS8-214ENST00000458721 ZNF594Q96JF6 807 aaPredicted RBP7.1□□□□□ -1.27
VPS8-214ENST00000458721 PKD2L1Q9P0L9 805 aa7.1□□□□□ -1.27
VPS8-214ENST00000458721 ZNF112Q9UJU3 913 aa7.1□□□□□ -1.27
VPS8-214ENST00000458721 SLC45A1Q9Y2W3 748 aa7.1□□□□□ -1.27
VPS8-214ENST00000458721 NR2E3Q9Y5X4 410 aa7.1□□□□□ -1.27
VPS8-214ENST00000458721 PHIPQ8WWQ0 1821 aa7.1□□□□□ -1.27
VPS8-214ENST00000458721 CUL9Q8IWT3 2517 aa7.09□□□□□ -1.27
VPS8-214ENST00000458721 MYH2Q9UKX2 1941 aa7.09□□□□□ -1.27
VPS8-214ENST00000458721 PTPRCP08575 1304 aa7.09□□□□□ -1.27
VPS8-214ENST00000458721 MYPNQ86TC9 1320 aa7.09□□□□□ -1.27
VPS8-214ENST00000458721 SALL1Q9NSC2 1324 aa7.09□□□□□ -1.27
VPS8-214ENST00000458721 FAM187AA6NFU0 413 aa7.09□□□□□ -1.27
VPS8-214ENST00000458721 F6X3S4 739 aa7.09□□□□□ -1.27
VPS8-214ENST00000458721 H0YGN5 161 aa7.09□□□□□ -1.27
VPS8-214ENST00000458721 PLIN1O60240 522 aa7.09□□□□□ -1.27
VPS8-214ENST00000458721 IFIT1P09914 478 aaKnown RBP7.09□□□□□ -1.27
VPS8-214ENST00000458721 FCGRTP55899 365 aa7.09□□□□□ -1.27
VPS8-214ENST00000458721 GUCA2AQ02747 115 aa7.09□□□□□ -1.27
VPS8-214ENST00000458721 EXOSC9Q06265 439 aaKnown RBP7.09□□□□□ -1.27
VPS8-214ENST00000458721 FOXC1Q12948 553 aa7.09□□□□□ -1.27
VPS8-214ENST00000458721 METTL24Q5JXM2 366 aa7.09□□□□□ -1.27
VPS8-214ENST00000458721 APOBEC3HQ6NTF7 200 aaKnown RBP7.09□□□□□ -1.27
VPS8-214ENST00000458721 RAET1EQ8TD07 263 aa7.09□□□□□ -1.27
VPS8-214ENST00000458721 SH3TC2Q8TF17 1288 aa7.09□□□□□ -1.27
VPS8-214ENST00000458721 FAM151AQ8WW52 585 aa7.09□□□□□ -1.27
VPS8-214ENST00000458721 TRIM47Q96LD4 638 aa7.09□□□□□ -1.27
VPS8-214ENST00000458721 PRO3102Q9H379 93 aa7.09□□□□□ -1.27
VPS8-214ENST00000458721 JAG2Q9Y219 1238 aa7.09□□□□□ -1.27
VPS8-214ENST00000458721 COL2A1P02458 1487 aaPredicted RBP7.09□□□□□ -1.27
VPS8-214ENST00000458721 RFX7Q2KHR2 1363 aa7.08□□□□□ -1.28
VPS8-214ENST00000458721 ATRNL1Q5VV63 1379 aa7.08□□□□□ -1.28
VPS8-214ENST00000458721 ATAD5Q96QE3 1844 aa7.08□□□□□ -1.28
VPS8-214ENST00000458721 MAST2Q6P0Q8 1798 aa7.08□□□□□ -1.28
VPS8-214ENST00000458721 PDS5AQ29RF7 1337 aaKnown RBP7.08□□□□□ -1.28
VPS8-214ENST00000458721 ALPK3Q96L96 1907 aa7.08□□□□□ -1.28
VPS8-214ENST00000458721 PDHXO00330 501 aa7.08□□□□□ -1.28
VPS8-214ENST00000458721 CXCL11O14625 94 aa7.08□□□□□ -1.28
VPS8-214ENST00000458721 BCRP11274 1271 aa7.08□□□□□ -1.28
VPS8-214ENST00000458721 PSMC4P43686 418 aa7.08□□□□□ -1.28
VPS8-214ENST00000458721 FASTKD5Q7L8L6 764 aaKnown RBP7.08□□□□□ -1.28
VPS8-214ENST00000458721 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.08□□□□□ -1.28
VPS8-214ENST00000458721 LPIN2Q92539 896 aa7.08□□□□□ -1.28
VPS8-214ENST00000458721 ZKSCAN4Q969J2 545 aaPredicted RBP7.08□□□□□ -1.28
VPS8-214ENST00000458721 KAZALD1Q96I82 304 aa7.08□□□□□ -1.28
VPS8-214ENST00000458721 SUCLG2Q96I99 432 aa7.08□□□□□ -1.28
VPS8-214ENST00000458721 ARHGAP39Q9C0H5 1083 aa7.08□□□□□ -1.28
VPS8-214ENST00000458721 BICC1Q9H694 974 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms