RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 PRRT2Q7Z6L0 340 aaPredicted RBP19.34■□□□□ 0.69
CD28-203ENST00000458610 TNS4Q8IZW8 715 aa19.34■□□□□ 0.69
CD28-203ENST00000458610 FAM43AQ8N2R8 423 aa19.34■□□□□ 0.69
CD28-203ENST00000458610 ZBTB21Q9ULJ3 1066 aa19.34■□□□□ 0.69
CD28-203ENST00000458610 FOCADQ5VW36 1801 aa19.33■□□□□ 0.69
CD28-203ENST00000458610 GSG1L2A8MUP6 293 aa19.33■□□□□ 0.68
CD28-203ENST00000458610 C19orf81C9J6K1 198 aa19.33■□□□□ 0.68
CD28-203ENST00000458610 M0R2C6 588 aa19.33■□□□□ 0.68
CD28-203ENST00000458610 HIP1O00291 1037 aa19.33■□□□□ 0.68
CD28-203ENST00000458610 FKTNO75072 461 aa19.33■□□□□ 0.68
CD28-203ENST00000458610 CRHR2Q13324 411 aa19.33■□□□□ 0.68
CD28-203ENST00000458610 RRP1BQ14684 758 aaKnown RBP19.33■□□□□ 0.68
CD28-203ENST00000458610 SBK1Q52WX2 424 aa19.33■□□□□ 0.68
CD28-203ENST00000458610 CTR9Q6PD62 1173 aa19.33■□□□□ 0.68
CD28-203ENST00000458610 CCDC17Q96LX7 622 aa19.33■□□□□ 0.68
CD28-203ENST00000458610 ZNF287Q9HBT7 754 aa19.33■□□□□ 0.68
CD28-203ENST00000458610 PDHXO00330 501 aa19.32■□□□□ 0.68
CD28-203ENST00000458610 GDF11O95390 407 aa19.32■□□□□ 0.68
CD28-203ENST00000458610 TDO2P48775 406 aa19.32■□□□□ 0.68
CD28-203ENST00000458610 PABPC4Q13310 644 aaKnown RBP eCLIP19.32■□□□□ 0.68
CD28-203ENST00000458610 ARHGEF6Q15052 776 aa19.32■□□□□ 0.68
CD28-203ENST00000458610 GADL1Q6ZQY3 521 aa19.32■□□□□ 0.68
CD28-203ENST00000458610 SLC45A1Q9Y2W3 748 aa19.32■□□□□ 0.68
CD28-203ENST00000458610 MYH1P12882 1939 aa19.31■□□□□ 0.68
CD28-203ENST00000458610 MYH7P12883 1935 aa19.31■□□□□ 0.68
CD28-203ENST00000458610 CDK5RAP2Q96SN8 1893 aa19.31■□□□□ 0.68
CD28-203ENST00000458610 USP17L10C9JJH3 530 aa19.31■□□□□ 0.68
CD28-203ENST00000458610 GH2P01242 217 aa19.31■□□□□ 0.68
CD28-203ENST00000458610 CYP2D6P10635 497 aa19.31■□□□□ 0.68
CD28-203ENST00000458610 SHMT1P34896 483 aa19.31■□□□□ 0.68
CD28-203ENST00000458610 MFAP1P55081 439 aaKnown RBP19.31■□□□□ 0.68
CD28-203ENST00000458610 MCMDC2Q4G0Z9 681 aa19.31■□□□□ 0.68
CD28-203ENST00000458610 CENPQQ7L2Z9 268 aaPredicted RBP19.31■□□□□ 0.68
CD28-203ENST00000458610 PROCA1Q8NCQ7 364 aaPredicted RBP19.31■□□□□ 0.68
CD28-203ENST00000458610 ZNF296Q8WUU4 475 aaPredicted RBP19.31■□□□□ 0.68
CD28-203ENST00000458610 TMOD4Q9NZQ9 345 aa19.31■□□□□ 0.68
CD28-203ENST00000458610 SLC3A2P08195 630 aaKnown RBP19.3■□□□□ 0.68
CD28-203ENST00000458610 SDSP20132 328 aa19.3■□□□□ 0.68
CD28-203ENST00000458610 BACE1P56817 501 aa19.3■□□□□ 0.68
CD28-203ENST00000458610 SH3D19Q5HYK7 790 aa19.3■□□□□ 0.68
CD28-203ENST00000458610 IFNL3Q8IZI9 196 aa19.3■□□□□ 0.68
CD28-203ENST00000458610 ERO1AQ96HE7 468 aa19.3■□□□□ 0.68
CD28-203ENST00000458610 SEC62Q99442 399 aaKnown RBP19.3■□□□□ 0.68
CD28-203ENST00000458610 PARK7Q99497 189 aaKnown RBP19.3■□□□□ 0.68
CD28-203ENST00000458610 NAPBQ9H115 298 aa19.3■□□□□ 0.68
CD28-203ENST00000458610 MINDY4BA8MYZ0 360 aa19.29■□□□□ 0.68
CD28-203ENST00000458610 MPHOSPH10O00566 681 aaKnown RBP19.29■□□□□ 0.68
CD28-203ENST00000458610 TLR2O60603 784 aa19.29■□□□□ 0.68
CD28-203ENST00000458610 CDK8P49336 464 aa19.29■□□□□ 0.68
CD28-203ENST00000458610 SP3Q02447 781 aa19.29■□□□□ 0.68
CD28-203ENST00000458610 MOGSQ13724 837 aa19.29■□□□□ 0.68
CD28-203ENST00000458610 RAB3GAP1Q15042 981 aa19.29■□□□□ 0.68
CD28-203ENST00000458610 GPAT2Q6NUI2 795 aa19.29■□□□□ 0.68
CD28-203ENST00000458610 C16orf86Q6ZW13 317 aa19.29■□□□□ 0.68
CD28-203ENST00000458610 CCDC84Q86UT8 332 aaPredicted RBP19.29■□□□□ 0.68
CD28-203ENST00000458610 DYNLL2Q96FJ2 89 aa19.29■□□□□ 0.68
CD28-203ENST00000458610 DIAPH3Q9NSV4 1193 aa19.29■□□□□ 0.68
CD28-203ENST00000458610 PNMA3Q9UL41 463 aa19.29■□□□□ 0.68
CD28-203ENST00000458610 AGTPBP1Q9UPW5 1226 aa19.29■□□□□ 0.68
CD28-203ENST00000458610 DOCK1Q14185 1865 aa19.28■□□□□ 0.68
CD28-203ENST00000458610 OSBPP22059 807 aa19.28■□□□□ 0.68
CD28-203ENST00000458610 PDE4AP27815 886 aa19.28■□□□□ 0.68
CD28-203ENST00000458610 USP14P54578 494 aa19.28■□□□□ 0.68
CD28-203ENST00000458610 PKN2Q16513 984 aaKnown RBP19.28■□□□□ 0.68
CD28-203ENST00000458610 USP17L2Q6R6M4 530 aa19.28■□□□□ 0.68
CD28-203ENST00000458610 TMEM179Q6ZVK1 233 aa19.28■□□□□ 0.68
CD28-203ENST00000458610 CTU1Q7Z7A3 348 aaKnown RBP19.28■□□□□ 0.68
CD28-203ENST00000458610 R3HDMLQ9H3Y0 253 aa19.28■□□□□ 0.68
CD28-203ENST00000458610 MKNK2Q9HBH9 465 aa19.28■□□□□ 0.68
CD28-203ENST00000458610 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.28■□□□□ 0.68
CD28-203ENST00000458610 LAMB1P07942 1786 aa19.28■□□□□ 0.68
CD28-203ENST00000458610 CYP2D7A0A087X1C5 515 aa19.27■□□□□ 0.68
CD28-203ENST00000458610 HMGCS2P54868 508 aa19.27■□□□□ 0.68
CD28-203ENST00000458610 JAG1P78504 1218 aa19.27■□□□□ 0.68
CD28-203ENST00000458610 DGKZQ13574 1117 aa19.27■□□□□ 0.68
CD28-203ENST00000458610 KIF22Q14807 665 aa19.27■□□□□ 0.68
CD28-203ENST00000458610 TTC22Q5TAA0 569 aa19.27■□□□□ 0.68
CD28-203ENST00000458610 CCDC136Q96JN2 1154 aa19.27■□□□□ 0.68
CD28-203ENST00000458610 FEZ1Q99689 392 aa19.27■□□□□ 0.68
CD28-203ENST00000458610 PDE4BQ07343 736 aa19.26■□□□□ 0.67
CD28-203ENST00000458610 NMIQ13287 307 aaPredicted RBP19.26■□□□□ 0.67
CD28-203ENST00000458610 MTMR2Q13614 643 aa19.26■□□□□ 0.67
CD28-203ENST00000458610 FAM227BQ96M60 508 aa19.26■□□□□ 0.67
CD28-203ENST00000458610 SH2D4AQ9H788 454 aa19.26■□□□□ 0.67
CD28-203ENST00000458610 NAV1Q8NEY1 1877 aa19.26■□□□□ 0.67
CD28-203ENST00000458610 ALX1Q15699 326 aa19.25■□□□□ 0.67
CD28-203ENST00000458610 ZNF444Q8N0Y2 327 aaPredicted RBP19.25■□□□□ 0.67
CD28-203ENST00000458610 SLC44A5Q8NCS7 719 aa19.25■□□□□ 0.67
CD28-203ENST00000458610 SMCR8Q8TEV9 937 aaPredicted RBP19.25■□□□□ 0.67
CD28-203ENST00000458610 EPB41L4AQ9HCS5 686 aaPredicted RBP19.25■□□□□ 0.67
CD28-203ENST00000458610 SIPA1L1O43166 1804 aa19.25■□□□□ 0.67
CD28-203ENST00000458610 A0A0D9SFI3 127 aa19.24■□□□□ 0.67
CD28-203ENST00000458610 SEPT2Q15019 361 aa19.24■□□□□ 0.67
CD28-203ENST00000458610 C17orf99Q6UX52 265 aa19.24■□□□□ 0.67
CD28-203ENST00000458610 CCDC129Q6ZRS4 1044 aa19.24■□□□□ 0.67
CD28-203ENST00000458610 KIAA1683Q9H0B3 1180 aa19.24■□□□□ 0.67
CD28-203ENST00000458610 KANSL2Q9H9L4 492 aa19.24■□□□□ 0.67
CD28-203ENST00000458610 ARHGEF10LQ9HCE6 1279 aa19.24■□□□□ 0.67
CD28-203ENST00000458610 CCDC171Q6TFL3 1326 aa19.24■□□□□ 0.67
CD28-203ENST00000458610 HOXA7P31268 230 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms