RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 LRP5O75197 1615 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 LRP6O75581 1613 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 ITIH6Q6UXX5 1313 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 MAGEB6P1A0A0J9YX57 407 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 A0A1B0GTH6 734 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 CTAGE15A4D2H0 777 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 CTAGE9A4FU28 777 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 CCDC151A5D8V7 595 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 VWA3AA6NCI4 1184 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 RANBP6O60518 1105 aaKnown RBP3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 DDAH1O94760 285 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 SLFN14P0C7P3 912 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 CTAGE8P0CG41 777 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 RXRAP19793 462 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 ATP2B1P20020 1258 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 GPTP24298 496 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 CALML3P27482 149 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 CDC27P30260 824 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 PHKA1P46020 1223 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 TRAPPC10P48553 1259 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 CHMP4BP1P59074 171 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 CTDSPL2Q05D32 466 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 CKAP4Q07065 602 aaKnown RBP3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 TBX2Q13207 712 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 SEMA3FQ13275 785 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 SCARF1Q14162 830 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 WHAMMP3Q1A5X7 153 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 KIF4BQ2VIQ3 1234 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 MAP9Q49MG5 647 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 PARP10Q53GL7 1025 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 CCDC178Q5BJE1 867 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 NOM1Q5C9Z4 860 aaKnown RBP3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 CC2D1AQ6P1N0 951 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 CYP26C1Q6V0L0 522 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 LEKR1Q6ZMV7 388 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 HDXQ7Z353 690 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 SRGAP1Q7Z6B7 1085 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 CTAGE6Q86UF2 777 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 NLRP10Q86W26 655 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 TMTC1Q8IUR5 882 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 FAM114A1Q8IWE2 563 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 REXO1L1PQ8IX06 675 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 CTAGE4Q8IX94 777 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 DNAJC10Q8IXB1 793 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 AMOTL1Q8IY63 956 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 ZNF654Q8IZM8 581 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 FAM177A1Q8N128 213 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 STK11IPQ8N1F8 1099 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 CRACR2BQ8N4Y2 399 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 IGSF22Q8N9C0 903 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 IQUBQ8NA54 791 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 FANCBQ8NB91 859 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 TTLL11Q8NHH1 800 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 RASSF8Q8NHQ8 419 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 CTCFLQ8NI51 663 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 IGDCC4Q8TDY8 1250 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 NOC3LQ8WTT2 800 aaKnown RBP3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 DPF2Q92785 391 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 DHX58Q96C10 678 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 GSDMAQ96QA5 445 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 NAPGQ99747 312 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 STRN4Q9NRL3 753 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 FAM53CQ9NYF3 392 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 LRP2BPQ9P2M1 347 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 MAGEC2Q9UBF1 373 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 FBXO2Q9UK22 296 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 WWC3Q9ULE0 1092 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 FHOD1Q9Y613 1164 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 PARP3Q9Y6F1 533 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 DOCK2Q92608 1830 aa3.78□□□□□ -1.8
HMGN1P18-201ENST00000457642 PLCH1Q4KWH8 1693 aa3.78□□□□□ -1.81
HMGN1P18-201ENST00000457642 MYH6P13533 1939 aa3.78□□□□□ -1.81
HMGN1P18-201ENST00000457642 AKAP11Q9UKA4 1901 aa3.78□□□□□ -1.81
HMGN1P18-201ENST00000457642 COL22A1Q8NFW1 1626 aaPredicted RBP3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 TNKSO95271 1327 aa3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 A0A0U1RQG5 324 aaPredicted RBP3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 TCRBV5S4A2TA0A5A2 114 aa3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 ERICH4A6NGS2 130 aa3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 BTBD18B2RXH4 712 aa3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 TMEM232C9JQI7 657 aa3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 N4BP3O15049 544 aa3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 POLR3GO15318 223 aaPredicted RBP3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 FOXP2O15409 715 aa3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 PRPF3O43395 683 aaKnown RBP3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 ACTN4O43707 911 aaKnown RBP3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 GTPBP6O43824 516 aaPredicted RBP3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 MFAP3LO75121 409 aa3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 ZRANB2O95218 330 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 MYL1P05976 194 aa3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 IVLP07476 585 aa3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 ZNF18P17022 549 aa3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 FGFR2P21802 821 aa3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 CYP7A1P22680 504 aa3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 GTF2E1P29083 439 aaPredicted RBP3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 OAS2P29728 719 aaKnown RBP3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 KIF5BP33176 963 aa3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 CYP2C19P33261 490 aa3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 IL6STP40189 918 aaPredicted RBP3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 PPP1R2P41236 205 aa3.77□□□□□ -1.81
HMGN1P18-201ENST00000457642 MAP3K9P80192 1104 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms