RNA–Protein interactions for RNA: ENST00000455939.1

LINC00161-202, long intergenic non-protein coding RNA 161, humanhuman

TSL 2

Gene LINC00161, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00161-202ENST00000455939 OGFOD3Q6PK18 319 aa7.99□□□□□ -1.13
LINC00161-202ENST00000455939 ARMCX6Q7L4S7 300 aa7.99□□□□□ -1.13
LINC00161-202ENST00000455939 METTL16Q86W50 562 aaKnown RBP7.99□□□□□ -1.13
LINC00161-202ENST00000455939 XAGE3Q8WTP9 111 aa7.99□□□□□ -1.13
LINC00161-202ENST00000455939 LRRC4CQ9HCJ2 640 aa7.99□□□□□ -1.13
LINC00161-202ENST00000455939 KCNQ5Q9NR82 932 aa7.99□□□□□ -1.13
LINC00161-202ENST00000455939 DDX41Q9UJV9 622 aaKnown RBP7.99□□□□□ -1.13
LINC00161-202ENST00000455939 SCO2A0A1W2PP80 73 aa7.98□□□□□ -1.13
LINC00161-202ENST00000455939 E9PSI1 815 aa7.98□□□□□ -1.13
LINC00161-202ENST00000455939 GREM1O60565 184 aa7.98□□□□□ -1.13
LINC00161-202ENST00000455939 LEFTY1O75610 366 aa7.98□□□□□ -1.13
LINC00161-202ENST00000455939 LRIG2O94898 1065 aa7.98□□□□□ -1.13
LINC00161-202ENST00000455939 MCM4P33991 863 aa7.98□□□□□ -1.13
LINC00161-202ENST00000455939 GRIK1P39086 918 aa7.98□□□□□ -1.13
LINC00161-202ENST00000455939 CRKP46108 304 aa7.98□□□□□ -1.13
LINC00161-202ENST00000455939 RACK1P63244 317 aaKnown RBP7.98□□□□□ -1.13
LINC00161-202ENST00000455939 CYP27C1Q4G0S4 372 aa7.98□□□□□ -1.13
LINC00161-202ENST00000455939 ZNF654Q8IZM8 581 aa7.98□□□□□ -1.13
LINC00161-202ENST00000455939 DPH2Q9BQC3 489 aaPredicted RBP7.98□□□□□ -1.13
LINC00161-202ENST00000455939 DUSP23Q9BVJ7 150 aa7.98□□□□□ -1.13
LINC00161-202ENST00000455939 FOXQ1Q9C009 403 aa7.98□□□□□ -1.13
LINC00161-202ENST00000455939 PIM2Q9P1W9 311 aa7.98□□□□□ -1.13
LINC00161-202ENST00000455939 RNF112Q9ULX5 631 aa7.98□□□□□ -1.13
LINC00161-202ENST00000455939 ROBO2Q9HCK4 1378 aa7.97□□□□□ -1.13
LINC00161-202ENST00000455939 CYP26A1O43174 497 aa7.97□□□□□ -1.13
LINC00161-202ENST00000455939 SLBPQ14493 270 aaKnown RBP eCLIP7.97□□□□□ -1.13
LINC00161-202ENST00000455939 PRAMEF13Q5VWM6 474 aa7.97□□□□□ -1.13
LINC00161-202ENST00000455939 NKD1Q969G9 470 aa7.97□□□□□ -1.13
LINC00161-202ENST00000455939 TMEM87BQ96K49 555 aa7.97□□□□□ -1.13
LINC00161-202ENST00000455939 BRMS1Q9HCU9 246 aa7.97□□□□□ -1.13
LINC00161-202ENST00000455939 PRDM10Q9NQV6 1147 aa7.97□□□□□ -1.13
LINC00161-202ENST00000455939 TJP2Q9UDY2 1190 aa7.97□□□□□ -1.13
LINC00161-202ENST00000455939 POLR3KQ9Y2Y1 108 aaPredicted RBP7.97□□□□□ -1.13
LINC00161-202ENST00000455939 PRR19A6NJB7 356 aa7.96□□□□□ -1.14
LINC00161-202ENST00000455939 TCF3P15923 654 aa7.96□□□□□ -1.14
LINC00161-202ENST00000455939 SSTR4P31391 388 aa7.96□□□□□ -1.14
LINC00161-202ENST00000455939 CPSF6Q16630 551 aaKnown RBP eCLIP7.96□□□□□ -1.14
LINC00161-202ENST00000455939 ARHGAP27Q6ZUM4 889 aa7.96□□□□□ -1.14
LINC00161-202ENST00000455939 FAM13CQ8NE31 585 aa7.96□□□□□ -1.14
LINC00161-202ENST00000455939 ACSF2Q96CM8 615 aaPredicted RBP7.96□□□□□ -1.14
LINC00161-202ENST00000455939 EAF1Q96JC9 268 aaPredicted RBP7.96□□□□□ -1.14
LINC00161-202ENST00000455939 PSMG3-AS1Q96PY0 264 aa7.96□□□□□ -1.14
LINC00161-202ENST00000455939 MIPEPQ99797 713 aa7.96□□□□□ -1.14
LINC00161-202ENST00000455939 NT5C1AQ9BXI3 368 aa7.96□□□□□ -1.14
LINC00161-202ENST00000455939 REV1Q9UBZ9 1251 aa7.96□□□□□ -1.14
LINC00161-202ENST00000455939 KLHL3Q9UH77 587 aa7.96□□□□□ -1.14
LINC00161-202ENST00000455939 ADAM30Q9UKF2 790 aa7.96□□□□□ -1.14
LINC00161-202ENST00000455939 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.96□□□□□ -1.14
LINC00161-202ENST00000455939 HTR3BO95264 441 aa7.95□□□□□ -1.14
LINC00161-202ENST00000455939 SLC6A19Q695T7 634 aa7.95□□□□□ -1.14
LINC00161-202ENST00000455939 GK5Q6ZS86 529 aa7.95□□□□□ -1.14
LINC00161-202ENST00000455939 MRPL41Q8IXM3 137 aaKnown RBP7.95□□□□□ -1.14
LINC00161-202ENST00000455939 MFSD2AQ8NA29 543 aa7.95□□□□□ -1.14
LINC00161-202ENST00000455939 LRRC3Q9BY71 257 aa7.95□□□□□ -1.14
LINC00161-202ENST00000455939 PCDHB14Q9Y5E9 798 aa7.95□□□□□ -1.14
LINC00161-202ENST00000455939 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.94□□□□□ -1.14
LINC00161-202ENST00000455939 COBLO75128 1261 aa7.94□□□□□ -1.14
LINC00161-202ENST00000455939 CST3P01034 146 aaPredicted RBP7.94□□□□□ -1.14
LINC00161-202ENST00000455939 ERCC5P28715 1186 aaPredicted RBP7.94□□□□□ -1.14
LINC00161-202ENST00000455939 YARSP54577 528 aaKnown RBP7.94□□□□□ -1.14
LINC00161-202ENST00000455939 PAK2Q13177 524 aa7.94□□□□□ -1.14
LINC00161-202ENST00000455939 MLECQ14165 292 aa7.94□□□□□ -1.14
LINC00161-202ENST00000455939 MCATQ8IVS2 390 aaKnown RBP7.94□□□□□ -1.14
LINC00161-202ENST00000455939 CCSER2Q9H7U1 834 aa7.94□□□□□ -1.14
LINC00161-202ENST00000455939 TPX2Q9ULW0 747 aaKnown RBP7.94□□□□□ -1.14
LINC00161-202ENST00000455939 UPK3BL1B0FP48 263 aa7.93□□□□□ -1.14
LINC00161-202ENST00000455939 UPK3BL2E5RIL1 263 aa7.93□□□□□ -1.14
LINC00161-202ENST00000455939 FOSL1P15407 271 aa7.93□□□□□ -1.14
LINC00161-202ENST00000455939 HOXA10P31260 410 aaPredicted RBP7.93□□□□□ -1.14
LINC00161-202ENST00000455939 CAP2P40123 477 aa7.93□□□□□ -1.14
LINC00161-202ENST00000455939 ZNF165P49910 485 aa7.93□□□□□ -1.14
LINC00161-202ENST00000455939 FAM181AQ8N9Y4 354 aa7.93□□□□□ -1.14
LINC00161-202ENST00000455939 SLITRK5O94991 958 aa7.92□□□□□ -1.14
LINC00161-202ENST00000455939 LETMD1Q6P1Q0 360 aa7.92□□□□□ -1.14
LINC00161-202ENST00000455939 INTS5Q6P9B9 1019 aaKnown RBP7.92□□□□□ -1.14
LINC00161-202ENST00000455939 KRTAP9-2Q9BYQ4 174 aa7.92□□□□□ -1.14
LINC00161-202ENST00000455939 TGIF2Q9GZN2 237 aa7.92□□□□□ -1.14
LINC00161-202ENST00000455939 ACBD3Q9H3P7 528 aa7.92□□□□□ -1.14
LINC00161-202ENST00000455939 PRDM5Q9NQX1 630 aaPredicted RBP7.92□□□□□ -1.14
LINC00161-202ENST00000455939 PCMTD2Q9NV79 361 aa7.92□□□□□ -1.14
LINC00161-202ENST00000455939 GTF2IRD1Q9UHL9 959 aa7.92□□□□□ -1.14
LINC00161-202ENST00000455939 PRR36Q9H6K5 1346 aa7.92□□□□□ -1.14
LINC00161-202ENST00000455939 ITIH2P19823 946 aa7.91□□□□□ -1.14
LINC00161-202ENST00000455939 CLCQ05315 142 aa7.91□□□□□ -1.14
LINC00161-202ENST00000455939 TMEM201Q5SNT2 666 aa7.91□□□□□ -1.14
LINC00161-202ENST00000455939 SLITRK4Q8IW52 837 aa7.91□□□□□ -1.14
LINC00161-202ENST00000455939 PHACTR4Q8IZ21 702 aa7.91□□□□□ -1.14
LINC00161-202ENST00000455939 INPP5FQ9Y2H2 1132 aa7.91□□□□□ -1.14
LINC00161-202ENST00000455939 CHURC1-FNTBB4DL54 471 aa7.9□□□□□ -1.14
LINC00161-202ENST00000455939 EOMESO95936 686 aa7.9□□□□□ -1.14
LINC00161-202ENST00000455939 TNNI2P48788 182 aa7.9□□□□□ -1.14
LINC00161-202ENST00000455939 LRP8Q14114 963 aa7.9□□□□□ -1.14
LINC00161-202ENST00000455939 FBXW10Q5XX13 1052 aa7.9□□□□□ -1.14
LINC00161-202ENST00000455939 CDH24Q86UP0 819 aa7.9□□□□□ -1.14
LINC00161-202ENST00000455939 RIN3Q8TB24 985 aa7.9□□□□□ -1.14
LINC00161-202ENST00000455939 GPRASP2Q96D09 838 aa7.9□□□□□ -1.14
LINC00161-202ENST00000455939 FERD3LQ96RJ6 166 aa7.9□□□□□ -1.14
LINC00161-202ENST00000455939 ZC3H7BQ9UGR2 993 aaKnown RBP7.9□□□□□ -1.14
LINC00161-202ENST00000455939 KRTAP9-6A0A140TA67 174 aa7.89□□□□□ -1.15
LINC00161-202ENST00000455939 GNAT3A8MTJ3 354 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms