RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 USP17L5A8MUK1 530 aa7.38□□□□□ -1.23
HLA-DPA3-207ENST00000454398 BCAR3O75815 825 aa7.38□□□□□ -1.23
HLA-DPA3-207ENST00000454398 ZKSCAN1P17029 563 aaPredicted RBP7.38□□□□□ -1.23
HLA-DPA3-207ENST00000454398 HERVK_113P62684 666 aa7.38□□□□□ -1.23
HLA-DPA3-207ENST00000454398 MDM2Q00987 491 aaPredicted RBP7.38□□□□□ -1.23
HLA-DPA3-207ENST00000454398 WDR78Q5VTH9 848 aa7.38□□□□□ -1.23
HLA-DPA3-207ENST00000454398 SPTY2D1Q68D10 685 aaPredicted RBP7.38□□□□□ -1.23
HLA-DPA3-207ENST00000454398 NAA16Q6N069 864 aaPredicted RBP7.38□□□□□ -1.23
HLA-DPA3-207ENST00000454398 NECAB2Q7Z6G3 386 aa7.38□□□□□ -1.23
HLA-DPA3-207ENST00000454398 SLF2Q8IX21 1173 aa7.38□□□□□ -1.23
HLA-DPA3-207ENST00000454398 P2RX7Q99572 595 aaKnown RBP7.38□□□□□ -1.23
HLA-DPA3-207ENST00000454398 GDF15Q99988 308 aa7.38□□□□□ -1.23
HLA-DPA3-207ENST00000454398 BCL11AQ9H165 835 aa7.38□□□□□ -1.23
HLA-DPA3-207ENST00000454398 C11orf49Q9H6J7 331 aa7.38□□□□□ -1.23
HLA-DPA3-207ENST00000454398 A0A0G2JMZ2 1700 aa7.38□□□□□ -1.23
HLA-DPA3-207ENST00000454398 SMIM22K7EJ46 135 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 CNMDO75829 334 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 GH2P01242 217 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 CYP2E1P05181 493 aaPredicted RBP7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 ZAP70P43403 619 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 GCLCP48506 637 aaPredicted RBP7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 BACE1P56817 501 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 GSTO1P78417 241 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 OS9Q13438 667 aaPredicted RBP7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 MTX1Q13505 466 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 LRRC26Q2I0M4 334 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 Q3C1V9 767 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 TNNI3KQ59H18 835 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 TTC39AQ5SRH9 613 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 MAP3K21Q5TCX8 1036 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 CLEC10AQ8IUN9 316 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 CRACR2BQ8N4Y2 399 aaPredicted RBP7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 TMEM57Q8N5G2 664 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 DEFB123Q8N688 67 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 FAM161BQ96MY7 647 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 FEZ1Q99689 392 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 TRIM34Q9BYJ4 488 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 NBPF3Q9H094 633 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 HMX1Q9NP08 348 aaPredicted RBP7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 TMOD4Q9NZQ9 345 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 FLRT1Q9NZU1 646 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 AKAP2Q9Y2D5 859 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 FPGT-TNNI3KV9GXZ4 949 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 MUC3AQ02505 3323 aa7.37□□□□□ -1.23
HLA-DPA3-207ENST00000454398 RPTORQ8N122 1335 aa7.36□□□□□ -1.23
HLA-DPA3-207ENST00000454398 TBC1D12O60347 775 aa7.36□□□□□ -1.23
HLA-DPA3-207ENST00000454398 IDH1O75874 414 aaKnown RBP7.36□□□□□ -1.23
HLA-DPA3-207ENST00000454398 GNAI2P04899 355 aa7.36□□□□□ -1.23
HLA-DPA3-207ENST00000454398 GNAI3P08754 354 aa7.36□□□□□ -1.23
HLA-DPA3-207ENST00000454398 ATN1P54259 1190 aaPredicted RBP7.36□□□□□ -1.23
HLA-DPA3-207ENST00000454398 ERVK-9P63128 1117 aa7.36□□□□□ -1.23
HLA-DPA3-207ENST00000454398 ERVK-24P63145 666 aa7.36□□□□□ -1.23
HLA-DPA3-207ENST00000454398 CACNB2Q08289 660 aaPredicted RBP7.36□□□□□ -1.23
HLA-DPA3-207ENST00000454398 PDE3AQ14432 1141 aa7.36□□□□□ -1.23
HLA-DPA3-207ENST00000454398 ANO1Q5XXA6 986 aa7.36□□□□□ -1.23
HLA-DPA3-207ENST00000454398 GPR142Q7Z601 462 aa7.36□□□□□ -1.23
HLA-DPA3-207ENST00000454398 ACER1Q8TDN7 264 aa7.36□□□□□ -1.23
HLA-DPA3-207ENST00000454398 USP6NLQ92738 828 aa7.36□□□□□ -1.23
HLA-DPA3-207ENST00000454398 APBA2Q99767 749 aa7.36□□□□□ -1.23
HLA-DPA3-207ENST00000454398 NOL10Q9BSC4 688 aaKnown RBP7.36□□□□□ -1.23
HLA-DPA3-207ENST00000454398 EMILIN3Q9NT22 766 aa7.36□□□□□ -1.23
HLA-DPA3-207ENST00000454398 MORF4L1Q9UBU8 362 aa7.36□□□□□ -1.23
HLA-DPA3-207ENST00000454398 HERC5Q9UII4 1024 aaKnown RBP7.36□□□□□ -1.23
HLA-DPA3-207ENST00000454398 DBNLQ9UJU6 430 aaKnown RBP7.36□□□□□ -1.23
HLA-DPA3-207ENST00000454398 MYH8P13535 1937 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 IGHA2P01877 340 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 MYCNP04198 464 aaPredicted RBP7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 ASNSP08243 561 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 COL6A1P12109 1028 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 RLBP1P12271 317 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 VCAM1P19320 739 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 CYP7A1P22680 504 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 CYP2C19P33261 490 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 G3BP1Q13283 466 aaKnown RBP eCLIP7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 PABPC4Q13310 644 aaKnown RBP eCLIP7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 RAB3GAP1Q15042 981 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 SH3D19Q5HYK7 790 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 LHX8Q68G74 356 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 SAMD1Q6SPF0 538 aaPredicted RBP7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 TDHQ8IZJ6 230 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 MAGEB6Q8N7X4 407 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 SLC44A5Q8NCS7 719 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 GPRC5AQ8NFJ5 357 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 SOCS4Q8WXH5 440 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 NUDT12Q9BQG2 462 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 UBE2OQ9C0C9 1292 aaKnown RBP7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 CCDC8Q9H0W5 538 aaPredicted RBP7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 ANTXR1Q9H6X2 564 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 AS3MTQ9HBK9 375 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 CWC22Q9HCG8 908 aaKnown RBP7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 PI4KBQ9UBF8 816 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 RBPJLQ9UBG7 517 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 OGDHLQ9ULD0 1010 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 RLFQ13129 1914 aa7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 BAZ2AQ9UIF9 1905 aaKnown RBP7.35□□□□□ -1.23
HLA-DPA3-207ENST00000454398 PARP14Q460N5 1801 aa7.34□□□□□ -1.23
HLA-DPA3-207ENST00000454398 A0A1W2PPC1 479 aa7.34□□□□□ -1.23
HLA-DPA3-207ENST00000454398 RBAK-RBAKDNI3L0D1 243 aa7.34□□□□□ -1.23
HLA-DPA3-207ENST00000454398 NPM3O75607 178 aaKnown RBP7.34□□□□□ -1.23
HLA-DPA3-207ENST00000454398 LDHCP07864 332 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms