RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 M0R2C6 588 aa23.94■■□□□ 1.42
COL9A3-202ENST00000452372 GPAA1O43292 621 aa23.94■■□□□ 1.42
COL9A3-202ENST00000452372 PLCD1P51178 756 aa23.94■■□□□ 1.42
COL9A3-202ENST00000452372 MOGSQ13724 837 aa23.94■■□□□ 1.42
COL9A3-202ENST00000452372 RILPL2Q969X0 211 aa23.94■■□□□ 1.42
COL9A3-202ENST00000452372 SEC62Q99442 399 aaKnown RBP23.94■■□□□ 1.42
COL9A3-202ENST00000452372 DNAJC18Q9H819 358 aa23.94■■□□□ 1.42
COL9A3-202ENST00000452372 SERPINB13Q9UIV8 391 aa23.94■■□□□ 1.42
COL9A3-202ENST00000452372 KCNH4Q9UQ05 1017 aa23.94■■□□□ 1.42
COL9A3-202ENST00000452372 MKI67P46013 3256 aaKnown RBP23.93■■□□□ 1.42
COL9A3-202ENST00000452372 TLR2O60603 784 aa23.93■■□□□ 1.42
COL9A3-202ENST00000452372 DDRGK1Q96HY6 314 aa23.93■■□□□ 1.42
COL9A3-202ENST00000452372 ZCCHC17Q9NP64 241 aaKnown RBP23.93■■□□□ 1.42
COL9A3-202ENST00000452372 PICK1Q9NRD5 415 aa23.93■■□□□ 1.42
COL9A3-202ENST00000452372 BAZ2AQ9UIF9 1905 aaKnown RBP23.92■■□□□ 1.42
COL9A3-202ENST00000452372 GSG1L2A8MUP6 293 aa23.92■■□□□ 1.42
COL9A3-202ENST00000452372 GNAT2P19087 354 aa23.92■■□□□ 1.42
COL9A3-202ENST00000452372 CAP2P40123 477 aa23.92■■□□□ 1.42
COL9A3-202ENST00000452372 RRP1BQ14684 758 aaKnown RBP23.92■■□□□ 1.42
COL9A3-202ENST00000452372 DOCK1Q14185 1865 aa23.92■■□□□ 1.42
COL9A3-202ENST00000452372 BRCA2P51587 3418 aa23.91■■□□□ 1.42
COL9A3-202ENST00000452372 PTPRAP18433 802 aa23.91■■□□□ 1.42
COL9A3-202ENST00000452372 GIMAP6Q6P9H5 292 aa23.91■■□□□ 1.42
COL9A3-202ENST00000452372 ARMC5Q96C12 935 aa23.91■■□□□ 1.42
COL9A3-202ENST00000452372 CCDC136Q96JN2 1154 aa23.91■■□□□ 1.42
COL9A3-202ENST00000452372 HELLSQ9NRZ9 838 aa23.91■■□□□ 1.42
COL9A3-202ENST00000452372 ZSWIM8A7E2V4 1837 aa23.9■■□□□ 1.42
COL9A3-202ENST00000452372 POTEFA5A3E0 1075 aa23.9■■□□□ 1.42
COL9A3-202ENST00000452372 USP17L12C9JPN9 530 aa23.9■■□□□ 1.42
COL9A3-202ENST00000452372 USP17L21D6R901 530 aa23.9■■□□□ 1.42
COL9A3-202ENST00000452372 GABPAQ06546 454 aa23.9■■□□□ 1.42
COL9A3-202ENST00000452372 TATDN1Q6P1N9 297 aa23.9■■□□□ 1.42
COL9A3-202ENST00000452372 ARHGAP39Q9C0H5 1083 aa23.9■■□□□ 1.42
COL9A3-202ENST00000452372 TAOK2Q9UL54 1235 aa23.9■■□□□ 1.42
COL9A3-202ENST00000452372 ZHX2Q9Y6X8 837 aa23.9■■□□□ 1.42
COL9A3-202ENST00000452372 PATL2C9JE40 543 aaKnown RBP23.89■■□□□ 1.41
COL9A3-202ENST00000452372 CYP2D6P10635 497 aa23.89■■□□□ 1.41
COL9A3-202ENST00000452372 SDSP20132 328 aa23.89■■□□□ 1.41
COL9A3-202ENST00000452372 TTC22Q5TAA0 569 aa23.89■■□□□ 1.41
COL9A3-202ENST00000452372 C12orf60Q5U649 245 aa23.89■■□□□ 1.41
COL9A3-202ENST00000452372 ERICH6BQ5W0A0 696 aa23.89■■□□□ 1.41
COL9A3-202ENST00000452372 C17orf99Q6UX52 265 aa23.89■■□□□ 1.41
COL9A3-202ENST00000452372 AMOTL1Q8IY63 956 aa23.89■■□□□ 1.41
COL9A3-202ENST00000452372 GINM1Q9NU53 330 aa23.89■■□□□ 1.41
COL9A3-202ENST00000452372 EVX2Q03828 476 aa23.88■■□□□ 1.41
COL9A3-202ENST00000452372 CTR9Q6PD62 1173 aa23.88■■□□□ 1.41
COL9A3-202ENST00000452372 ANKRD23Q86SG2 305 aa23.88■■□□□ 1.41
COL9A3-202ENST00000452372 FAM227BQ96M60 508 aa23.88■■□□□ 1.41
COL9A3-202ENST00000452372 AFG3L2Q9Y4W6 797 aa23.88■■□□□ 1.41
COL9A3-202ENST00000452372 ATAD5Q96QE3 1844 aa23.88■■□□□ 1.41
COL9A3-202ENST00000452372 CXCL11O14625 94 aa23.87■■□□□ 1.41
COL9A3-202ENST00000452372 GSPT1P15170 499 aaKnown RBP23.87■■□□□ 1.41
COL9A3-202ENST00000452372 CTGFP29279 349 aa23.87■■□□□ 1.41
COL9A3-202ENST00000452372 MCMDC2Q4G0Z9 681 aa23.87■■□□□ 1.41
COL9A3-202ENST00000452372 SBK1Q52WX2 424 aa23.87■■□□□ 1.41
COL9A3-202ENST00000452372 GPAT2Q6NUI2 795 aa23.87■■□□□ 1.41
COL9A3-202ENST00000452372 ARPP21Q9UBL0 812 aaPredicted RBP23.87■■□□□ 1.41
COL9A3-202ENST00000452372 PTCH2Q9Y6C5 1203 aa23.87■■□□□ 1.41
COL9A3-202ENST00000452372 PHIPQ8WWQ0 1821 aa23.87■■□□□ 1.41
COL9A3-202ENST00000452372 ADGRA2Q96PE1 1338 aa23.86■■□□□ 1.41
COL9A3-202ENST00000452372 CYP2D7A0A087X1C5 515 aa23.86■■□□□ 1.41
COL9A3-202ENST00000452372 A0A0D9SFI3 127 aa23.86■■□□□ 1.41
COL9A3-202ENST00000452372 PDHXO00330 501 aa23.86■■□□□ 1.41
COL9A3-202ENST00000452372 APPP05067 770 aa23.86■■□□□ 1.41
COL9A3-202ENST00000452372 ASNSP08243 561 aa23.86■■□□□ 1.41
COL9A3-202ENST00000452372 SHMT1P34896 483 aa23.86■■□□□ 1.41
COL9A3-202ENST00000452372 JAG1P78504 1218 aa23.86■■□□□ 1.41
COL9A3-202ENST00000452372 LACTBP83111 547 aaPredicted RBP23.86■■□□□ 1.41
COL9A3-202ENST00000452372 NMIQ13287 307 aaPredicted RBP23.86■■□□□ 1.41
COL9A3-202ENST00000452372 CCDC129Q6ZRS4 1044 aa23.86■■□□□ 1.41
COL9A3-202ENST00000452372 IFNL3Q8IZI9 196 aa23.86■■□□□ 1.41
COL9A3-202ENST00000452372 TBC1D2Q9BYX2 928 aa23.86■■□□□ 1.41
COL9A3-202ENST00000452372 EPB41L4AQ9HCS5 686 aaPredicted RBP23.86■■□□□ 1.41
COL9A3-202ENST00000452372 SWAP70Q9UH65 585 aa23.86■■□□□ 1.41
COL9A3-202ENST00000452372 USP17L5A8MUK1 530 aa23.85■■□□□ 1.41
COL9A3-202ENST00000452372 HIP1O00291 1037 aa23.85■■□□□ 1.41
COL9A3-202ENST00000452372 GDF11O95390 407 aa23.85■■□□□ 1.41
COL9A3-202ENST00000452372 CERKLQ49MI3 558 aaPredicted RBP23.85■■□□□ 1.41
COL9A3-202ENST00000452372 NACAP1Q9BZK3 213 aa23.85■■□□□ 1.41
COL9A3-202ENST00000452372 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.85■■□□□ 1.41
COL9A3-202ENST00000452372 RBBP6Q7Z6E9 1792 aaKnown RBP23.84■■□□□ 1.41
COL9A3-202ENST00000452372 TDO2P48775 406 aa23.84■■□□□ 1.41
COL9A3-202ENST00000452372 CCDC84Q86UT8 332 aaPredicted RBP23.84■■□□□ 1.41
COL9A3-202ENST00000452372 DYNLL2Q96FJ2 89 aa23.84■■□□□ 1.41
COL9A3-202ENST00000452372 ZNF333Q96JL9 665 aa23.84■■□□□ 1.41
COL9A3-202ENST00000452372 CPA4Q9UI42 421 aa23.84■■□□□ 1.41
COL9A3-202ENST00000452372 ZBTB21Q9ULJ3 1066 aa23.84■■□□□ 1.41
COL9A3-202ENST00000452372 SMIM22K7EJ46 135 aa23.83■■□□□ 1.41
COL9A3-202ENST00000452372 ARHGEF6Q15052 776 aa23.83■■□□□ 1.41
COL9A3-202ENST00000452372 SHROOM1Q2M3G4 852 aaPredicted RBP23.83■■□□□ 1.41
COL9A3-202ENST00000452372 ZNF280CQ8ND82 737 aa23.83■■□□□ 1.41
COL9A3-202ENST00000452372 AS3MTQ9HBK9 375 aa23.83■■□□□ 1.41
COL9A3-202ENST00000452372 SLC34A2O95436 690 aa23.82■■□□□ 1.4
COL9A3-202ENST00000452372 GH2P01242 217 aa23.82■■□□□ 1.4
COL9A3-202ENST00000452372 EN2P19622 333 aaPredicted RBP23.82■■□□□ 1.4
COL9A3-202ENST00000452372 CDK8P49336 464 aa23.82■■□□□ 1.4
COL9A3-202ENST00000452372 ABCB5Q2M3G0 1257 aa23.82■■□□□ 1.4
COL9A3-202ENST00000452372 C16orf86Q6ZW13 317 aa23.82■■□□□ 1.4
COL9A3-202ENST00000452372 SLC44A5Q8NCS7 719 aa23.82■■□□□ 1.4
COL9A3-202ENST00000452372 WDR18Q9BV38 432 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms