RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 HAUS7Q99871 368 aa20.56■□□□□ 0.88
PRPF40A-204ENST00000450303 AS3MTQ9HBK9 375 aa20.56■□□□□ 0.88
PRPF40A-204ENST00000450303 AGTPBP1Q9UPW5 1226 aa20.56■□□□□ 0.88
PRPF40A-204ENST00000450303 BCRP11274 1271 aa20.55■□□□□ 0.88
PRPF40A-204ENST00000450303 LCORLQ8N3X6 602 aa20.55■□□□□ 0.88
PRPF40A-204ENST00000450303 TRIM47Q96LD4 638 aa20.55■□□□□ 0.88
PRPF40A-204ENST00000450303 SLC45A1Q9Y2W3 748 aa20.55■□□□□ 0.88
PRPF40A-204ENST00000450303 NAV1Q8NEY1 1877 aa20.54■□□□□ 0.88
PRPF40A-204ENST00000450303 MYCP01106 439 aaPredicted RBP20.54■□□□□ 0.88
PRPF40A-204ENST00000450303 ASNSP08243 561 aa20.54■□□□□ 0.88
PRPF40A-204ENST00000450303 PLCD1P51178 756 aa20.54■□□□□ 0.88
PRPF40A-204ENST00000450303 TTC6Q86TZ1 520 aa20.54■□□□□ 0.88
PRPF40A-204ENST00000450303 SDR42E1Q8WUS8 393 aa20.54■□□□□ 0.88
PRPF40A-204ENST00000450303 TBC1D2Q9BYX2 928 aa20.54■□□□□ 0.88
PRPF40A-204ENST00000450303 CRNKL1Q9BZJ0 848 aaKnown RBP20.54■□□□□ 0.88
PRPF40A-204ENST00000450303 ARMT1Q9H993 441 aa20.54■□□□□ 0.88
PRPF40A-204ENST00000450303 ZBTB21Q9ULJ3 1066 aa20.54■□□□□ 0.88
PRPF40A-204ENST00000450303 MGAMO43451 1857 aa20.54■□□□□ 0.88
PRPF40A-204ENST00000450303 POTEFA5A3E0 1075 aa20.53■□□□□ 0.88
PRPF40A-204ENST00000450303 POLR3DP05423 398 aaPredicted RBP20.53■□□□□ 0.88
PRPF40A-204ENST00000450303 OSBPP22059 807 aa20.53■□□□□ 0.88
PRPF40A-204ENST00000450303 ADD2P35612 726 aa20.53■□□□□ 0.88
PRPF40A-204ENST00000450303 EVX2Q03828 476 aa20.53■□□□□ 0.88
PRPF40A-204ENST00000450303 MTMR2Q13614 643 aa20.53■□□□□ 0.88
PRPF40A-204ENST00000450303 SLC9C1Q4G0N8 1177 aa20.53■□□□□ 0.88
PRPF40A-204ENST00000450303 PROCA1Q8NCQ7 364 aaPredicted RBP20.53■□□□□ 0.88
PRPF40A-204ENST00000450303 SMCR8Q8TEV9 937 aaPredicted RBP20.53■□□□□ 0.88
PRPF40A-204ENST00000450303 SH3TC2Q8TF17 1288 aa20.53■□□□□ 0.88
PRPF40A-204ENST00000450303 ARMC5Q96C12 935 aa20.53■□□□□ 0.88
PRPF40A-204ENST00000450303 GPATCH3Q96I76 525 aa20.53■□□□□ 0.88
PRPF40A-204ENST00000450303 WDR18Q9BV38 432 aa20.53■□□□□ 0.88
PRPF40A-204ENST00000450303 SERPINB13Q9UIV8 391 aa20.53■□□□□ 0.88
PRPF40A-204ENST00000450303 LOC285556D6RIA3 1793 aa20.53■□□□□ 0.88
PRPF40A-204ENST00000450303 MYH7P12883 1935 aa20.53■□□□□ 0.88
PRPF40A-204ENST00000450303 GH2P01242 217 aa20.52■□□□□ 0.88
PRPF40A-204ENST00000450303 TSHZ3Q63HK5 1081 aa20.52■□□□□ 0.88
PRPF40A-204ENST00000450303 ECHDC1Q9NTX5 307 aa20.52■□□□□ 0.88
PRPF40A-204ENST00000450303 MCM9Q9NXL9 1143 aa20.52■□□□□ 0.88
PRPF40A-204ENST00000450303 PRKAB2O43741 272 aa20.51■□□□□ 0.87
PRPF40A-204ENST00000450303 MBD4O95243 580 aa20.51■□□□□ 0.87
PRPF40A-204ENST00000450303 GNRH1P01148 92 aa20.51■□□□□ 0.87
PRPF40A-204ENST00000450303 BACE1P56817 501 aa20.51■□□□□ 0.87
PRPF40A-204ENST00000450303 SH3D19Q5HYK7 790 aa20.51■□□□□ 0.87
PRPF40A-204ENST00000450303 TATDN1Q6P1N9 297 aa20.51■□□□□ 0.87
PRPF40A-204ENST00000450303 ANKRD13CQ8N6S4 541 aa20.51■□□□□ 0.87
PRPF40A-204ENST00000450303 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.51■□□□□ 0.872e-8■□□□□ 8.2
PRPF40A-204ENST00000450303 EHD4Q9H223 541 aa20.51■□□□□ 0.87
PRPF40A-204ENST00000450303 SRRDQ9UH36 339 aa20.51■□□□□ 0.87
PRPF40A-204ENST00000450303 DDX60LQ5H9U9 1706 aaKnown RBP20.5■□□□□ 0.87
PRPF40A-204ENST00000450303 HTTP42858 3142 aa20.5■□□□□ 0.87
PRPF40A-204ENST00000450303 USP17L10C9JJH3 530 aa20.5■□□□□ 0.87
PRPF40A-204ENST00000450303 CYP2D6P10635 497 aa20.5■□□□□ 0.87
PRPF40A-204ENST00000450303 HOXD10P28358 340 aa20.5■□□□□ 0.87
PRPF40A-204ENST00000450303 FCGRTP55899 365 aa20.5■□□□□ 0.87
PRPF40A-204ENST00000450303 CERKLQ49MI3 558 aaPredicted RBP20.5■□□□□ 0.87
PRPF40A-204ENST00000450303 NBPF11Q86T75 865 aa20.5■□□□□ 0.87
PRPF40A-204ENST00000450303 ZNF333Q96JL9 665 aa20.5■□□□□ 0.87
PRPF40A-204ENST00000450303 GINM1Q9NU53 330 aa20.5■□□□□ 0.87
PRPF40A-204ENST00000450303 TMOD4Q9NZQ9 345 aa20.5■□□□□ 0.87
PRPF40A-204ENST00000450303 PNMA3Q9UL41 463 aa20.5■□□□□ 0.87
PRPF40A-204ENST00000450303 MYPNQ86TC9 1320 aa20.5■□□□□ 0.87
PRPF40A-204ENST00000450303 BAZ2AQ9UIF9 1905 aaKnown RBP20.49■□□□□ 0.87
PRPF40A-204ENST00000450303 SHMT1P34896 483 aa20.49■□□□□ 0.87
PRPF40A-204ENST00000450303 PRMT2P55345 433 aa20.49■□□□□ 0.87
PRPF40A-204ENST00000450303 PABPC4Q13310 644 aaKnown RBP eCLIP20.49■□□□□ 0.87
PRPF40A-204ENST00000450303 RAET1EQ8TD07 263 aa20.49■□□□□ 0.87
PRPF40A-204ENST00000450303 ASCC2Q9H1I8 757 aaPredicted RBP20.49■□□□□ 0.87
PRPF40A-204ENST00000450303 DCP1AQ9NPI6 582 aaPredicted RBP20.49■□□□□ 0.87
PRPF40A-204ENST00000450303 GABRQQ9UN88 632 aa20.49■□□□□ 0.87
PRPF40A-204ENST00000450303 KIAA0100Q14667 2235 aaKnown RBP20.49■□□□□ 0.87
PRPF40A-204ENST00000450303 TNRC18O15417 2968 aaPredicted RBP20.49■□□□□ 0.87
PRPF40A-204ENST00000450303 EN2P19622 333 aaPredicted RBP20.48■□□□□ 0.87
PRPF40A-204ENST00000450303 MX1P20591 662 aa20.48■□□□□ 0.87
PRPF40A-204ENST00000450303 PRKCZQ05513 592 aa20.48■□□□□ 0.87
PRPF40A-204ENST00000450303 RAB3GAP1Q15042 981 aa20.48■□□□□ 0.87
PRPF40A-204ENST00000450303 ZYXQ15942 572 aaKnown RBP20.48■□□□□ 0.87
PRPF40A-204ENST00000450303 ABCB5Q2M3G0 1257 aa20.48■□□□□ 0.87
PRPF40A-204ENST00000450303 TTC41PQ6P2S7 1318 aa20.48■□□□□ 0.87
PRPF40A-204ENST00000450303 DOCK3Q8IZD9 2030 aa20.48■□□□□ 0.87
PRPF40A-204ENST00000450303 C19orf81C9J6K1 198 aa20.47■□□□□ 0.87
PRPF40A-204ENST00000450303 ERC2O15083 957 aa20.47■□□□□ 0.87
PRPF40A-204ENST00000450303 UBE3CQ15386 1083 aa20.47■□□□□ 0.87
PRPF40A-204ENST00000450303 TMEM106CQ9BVX2 250 aa20.47■□□□□ 0.87
PRPF40A-204ENST00000450303 PUS7LQ9H0K6 701 aaKnown RBP20.47■□□□□ 0.87
PRPF40A-204ENST00000450303 PEX10O60683 326 aa20.46■□□□□ 0.87
PRPF40A-204ENST00000450303 GABPAQ06546 454 aa20.46■□□□□ 0.87
PRPF40A-204ENST00000450303 ZSCAN25Q6NSZ9 544 aa20.46■□□□□ 0.87
PRPF40A-204ENST00000450303 SLC44A5Q8NCS7 719 aa20.46■□□□□ 0.87
PRPF40A-204ENST00000450303 OTUD7AQ8TE49 926 aaPredicted RBP20.46■□□□□ 0.87
PRPF40A-204ENST00000450303 DYNLL2Q96FJ2 89 aa20.46■□□□□ 0.87
PRPF40A-204ENST00000450303 P2RX7Q99572 595 aaKnown RBP20.46■□□□□ 0.87
PRPF40A-204ENST00000450303 CABP5Q9NP86 173 aa20.46■□□□□ 0.87
PRPF40A-204ENST00000450303 EMILIN3Q9NT22 766 aa20.46■□□□□ 0.87
PRPF40A-204ENST00000450303 RBBP6Q7Z6E9 1792 aaKnown RBP20.45■□□□□ 0.86
PRPF40A-204ENST00000450303 CYP2D7A0A087X1C5 515 aa20.45■□□□□ 0.86
PRPF40A-204ENST00000450303 SMIM22K7EJ46 135 aa20.45■□□□□ 0.86
PRPF40A-204ENST00000450303 TNPO2O14787 897 aaKnown RBP20.45■□□□□ 0.86
PRPF40A-204ENST00000450303 PDE4AP27815 886 aa20.45■□□□□ 0.86
PRPF40A-204ENST00000450303 IRX3P78415 501 aaPredicted RBP20.45■□□□□ 0.86
PRPF40A-204ENST00000450303 USP17L2Q6R6M4 530 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms