RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 FSBPO95073 299 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 UBTFL1P0CB47 393 aaPredicted RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 GCLCP48506 637 aaPredicted RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 POLE2P56282 527 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 ZC3H6P61129 1189 aaKnown RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 CASP8Q14790 479 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 IQCB1Q15051 598 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 ANKRD20A4Q4UJ75 823 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 ANKRD20A8PQ5CZ79 823 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 CFAP157Q5JU67 520 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 ANKRD20A2Q5SQ80 823 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 C20orf194Q5TEA3 1177 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 ANKRD20A1Q5TYW2 823 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 DAB2IPQ5VWQ8 1189 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 TSHZ1Q6ZSZ6 1077 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 PLA2G4DQ86XP0 818 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 MAP7D3Q8IWC1 876 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 FNBP4Q8N3X1 1017 aaPredicted RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 MPNDQ8N594 471 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 FBXW7Q969H0 707 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 HVCN1Q96D96 273 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 CATSPER2Q96P56 530 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 SPZ1Q9BXG8 430 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 BCL2L13Q9BXK5 485 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 YIPF3Q9GZM5 350 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 ZC4H2Q9NQZ6 224 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 IFNKQ9P0W0 207 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 PUF60Q9UHX1 559 aaKnown RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 MCM8Q9UJA3 840 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 ADGRL3Q9HAR2 1447 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 SOS1Q07889 1333 aaPredicted RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 MED14O60244 1454 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 SHANK2Q9UPX8 1470 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 EIF3HO15372 352 aaKnown RBP eCLIP2.45□□□□□ -2.02
USP53-202ENST00000450251 DIAPH2O60879 1101 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 DDX58O95786 925 aaKnown RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 VDRP11473 427 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 TCP1P17987 556 aaKnown RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 SERPINB8P50452 374 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 GSCP56915 257 aaPredicted RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 ESRRGP62508 458 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 KPNB1Q14974 876 aaKnown RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 TMEM259Q4ZIN3 620 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 NAIF1Q69YI7 327 aaPredicted RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 SPATA21Q7Z572 469 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 MCF2L2Q86YR7 1114 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 TRIML1Q8N9V2 468 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 CATSPER1Q8NEC5 780 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 RAB3IL1Q8TBN0 382 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.45□□□□□ -2.02
USP53-202ENST00000450251 SNRNP27Q8WVK2 155 aaKnown RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 TRIM63Q969Q1 353 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 EPSTI1Q96J88 318 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 MS4A4AQ96JQ5 239 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 CAPZA3Q96KX2 299 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 ESYT1Q9BSJ8 1104 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 CCDC113Q9H0I3 377 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 KIAA0556O60303 1618 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 TDRD9Q8NDG6 1382 aaKnown RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 IPO5O00410 1097 aaKnown RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 AREL1O15033 823 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 LSM1O15116 133 aaKnown RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 CYTH3O43739 400 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 ATP2C2O75185 946 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 TBCAO75347 108 aaKnown RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 SERPINI2O75830 405 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 H2AFXP16104 143 aaPredicted RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 ACADSP16219 412 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 ATP2A2P16615 1042 aaKnown RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 S100A1P23297 94 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 COG7P83436 770 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 KLC1Q07866 573 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 TUBA3CQ13748 450 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 TNIP1Q15025 636 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 Q4G0T1 1027 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 CFAP221Q4G0U5 840 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 VWA3BQ502W6 1294 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 ZBTB41Q5SVQ8 909 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 PPP4R3AQ6IN85 833 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 KLC3Q6P597 504 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 LRIG3Q6UXM1 1119 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 HEATR3Q7Z4Q2 680 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.45□□□□□ -2.02
USP53-202ENST00000450251 ZC3H15Q8WU90 426 aaKnown RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 CACTINQ8WUQ7 758 aaKnown RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 TEKT4Q8WW24 435 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 FSD1Q9BTV5 496 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 OSBPL5Q9H0X9 879 aaPredicted RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 EPN3Q9H201 632 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 TMCO1Q9UM00 188 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 AKAP2Q9Y2D5 859 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 UTP11Q9Y3A2 253 aaKnown RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 RPAP1Q9BWH6 1393 aaPredicted RBP2.44□□□□□ -2.02
USP53-202ENST00000450251 ZFYVE9O95405 1425 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 GOLGA8QA0A0J9YX86 632 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 BICDL2A1A5D9 508 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 GOLGA8OA6NCC3 632 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 FAM177BA6PVY3 158 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 GOLGA8NF8WBI6 632 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 TBC1D12O60347 775 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms