RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 PRUNE2Q8WUY3 3088 aa16.93■□□□□ 0.3
CPSF7-207ENST00000449811 A0A1B0GUL7 405 aa16.93■□□□□ 0.3
CPSF7-207ENST00000449811 C19orf81C9J6K1 198 aa16.93■□□□□ 0.3
CPSF7-207ENST00000449811 MVPQ14764 893 aaKnown RBP16.93■□□□□ 0.3
CPSF7-207ENST00000449811 Q3C1V9 767 aa16.93■□□□□ 0.3
CPSF7-207ENST00000449811 PLEKHH3Q7Z736 793 aa16.93■□□□□ 0.3
CPSF7-207ENST00000449811 TEX11Q8IYF3 940 aa16.93■□□□□ 0.3
CPSF7-207ENST00000449811 GTF3C2Q8WUA4 911 aaPredicted RBP16.93■□□□□ 0.3
CPSF7-207ENST00000449811 PAGR1Q9BTK6 254 aa16.93■□□□□ 0.3
CPSF7-207ENST00000449811 PI4KBQ9UBF8 816 aa16.93■□□□□ 0.3
CPSF7-207ENST00000449811 CDX2Q99626 313 aaPredicted RBP16.92■□□□□ 0.3
CPSF7-207ENST00000449811 CWC22Q9HCG8 908 aaKnown RBP16.92■□□□□ 0.3
CPSF7-207ENST00000449811 RAI14Q9P0K7 980 aa16.92■□□□□ 0.3
CPSF7-207ENST00000449811 PRKAG2Q9UGJ0 569 aa16.92■□□□□ 0.3
CPSF7-207ENST00000449811 AKAP2Q9Y2D5 859 aa16.92■□□□□ 0.3
CPSF7-207ENST00000449811 USP17L10C9JJH3 530 aa16.91■□□□□ 0.3
CPSF7-207ENST00000449811 ATN1P54259 1190 aaPredicted RBP16.91■□□□□ 0.3
CPSF7-207ENST00000449811 JAG1P78504 1218 aa16.91■□□□□ 0.3
CPSF7-207ENST00000449811 MAP2K5Q13163 448 aa16.91■□□□□ 0.3
CPSF7-207ENST00000449811 PI16Q6UXB8 463 aa16.91■□□□□ 0.3
CPSF7-207ENST00000449811 TBC1D9Q6ZT07 1266 aa16.91■□□□□ 0.3
CPSF7-207ENST00000449811 MAFAQ8NHW3 353 aaPredicted RBP16.91■□□□□ 0.3
CPSF7-207ENST00000449811 DHX36Q9H2U1 1008 aaKnown RBP16.91■□□□□ 0.3
CPSF7-207ENST00000449811 PRDM6Q9NQX0 595 aa16.91■□□□□ 0.3
CPSF7-207ENST00000449811 HMG20BQ9P0W2 317 aa16.91■□□□□ 0.3
CPSF7-207ENST00000449811 MAST2Q6P0Q8 1798 aa16.91■□□□□ 0.3
CPSF7-207ENST00000449811 ZNF521Q96K83 1311 aa16.91■□□□□ 0.3
CPSF7-207ENST00000449811 CDH23Q9H251 3354 aa16.9■□□□□ 0.3
CPSF7-207ENST00000449811 MFSD14CQ5VZR4 134 aa16.9■□□□□ 0.3
CPSF7-207ENST00000449811 SPATA5Q8NB90 893 aa16.9■□□□□ 0.3
CPSF7-207ENST00000449811 SH3RF3Q8TEJ3 882 aaPredicted RBP16.9■□□□□ 0.3
CPSF7-207ENST00000449811 EDC3Q96F86 508 aaKnown RBP16.9■□□□□ 0.3
CPSF7-207ENST00000449811 NOL10Q9BSC4 688 aaKnown RBP16.9■□□□□ 0.3
CPSF7-207ENST00000449811 DDX20Q9UHI6 824 aaKnown RBP16.9■□□□□ 0.3
CPSF7-207ENST00000449811 HDAC5Q9UQL6 1122 aa16.9■□□□□ 0.3
CPSF7-207ENST00000449811 MSCO60682 206 aa16.89■□□□□ 0.29
CPSF7-207ENST00000449811 GDF11O95390 407 aa16.89■□□□□ 0.29
CPSF7-207ENST00000449811 RTP1P59025 263 aa16.89■□□□□ 0.29
CPSF7-207ENST00000449811 TFCP2Q12800 502 aa16.89■□□□□ 0.29
CPSF7-207ENST00000449811 POTEEQ6S8J3 1075 aa16.89■□□□□ 0.29
CPSF7-207ENST00000449811 FAM9BQ8IZU0 186 aa16.89■□□□□ 0.29
CPSF7-207ENST00000449811 CRACR2BQ8N4Y2 399 aaPredicted RBP16.89■□□□□ 0.29
CPSF7-207ENST00000449811 LPAR1Q92633 364 aa16.89■□□□□ 0.29
CPSF7-207ENST00000449811 NEUROD6Q96NK8 337 aa16.89■□□□□ 0.29
CPSF7-207ENST00000449811 TRIM34Q9BYJ4 488 aa16.89■□□□□ 0.29
CPSF7-207ENST00000449811 SEMA6BQ9H3T3 888 aa16.89■□□□□ 0.29
CPSF7-207ENST00000449811 DNAJC18Q9H819 358 aa16.89■□□□□ 0.29
CPSF7-207ENST00000449811 GINM1Q9NU53 330 aa16.89■□□□□ 0.29
CPSF7-207ENST00000449811 FRMPD3Q5JV73 1810 aa16.89■□□□□ 0.29
CPSF7-207ENST00000449811 DNM1LO00429 736 aa16.88■□□□□ 0.29
CPSF7-207ENST00000449811 GLRX3O76003 335 aaKnown RBP16.88■□□□□ 0.29
CPSF7-207ENST00000449811 CNGA1P29973 690 aa16.88■□□□□ 0.29
CPSF7-207ENST00000449811 SHHQ15465 462 aa16.88■□□□□ 0.29
CPSF7-207ENST00000449811 SHROOM1Q2M3G4 852 aaPredicted RBP16.88■□□□□ 0.29
CPSF7-207ENST00000449811 ALDH1L2Q3SY69 923 aa16.88■□□□□ 0.29
CPSF7-207ENST00000449811 EMILIN3Q9NT22 766 aa16.88■□□□□ 0.29
CPSF7-207ENST00000449811 FLRT1Q9NZU1 646 aa16.88■□□□□ 0.29
CPSF7-207ENST00000449811 ZBTB21Q9ULJ3 1066 aa16.88■□□□□ 0.29
CPSF7-207ENST00000449811 SIPA1L1O43166 1804 aa16.87■□□□□ 0.29
CPSF7-207ENST00000449811 ANP32CO43423 234 aa16.87■□□□□ 0.29
CPSF7-207ENST00000449811 CCNA1P78396 465 aa16.87■□□□□ 0.29
CPSF7-207ENST00000449811 GORABQ5T7V8 394 aa16.87■□□□□ 0.29
CPSF7-207ENST00000449811 WDR78Q5VTH9 848 aa16.87■□□□□ 0.29
CPSF7-207ENST00000449811 USP17L2Q6R6M4 530 aa16.87■□□□□ 0.29
CPSF7-207ENST00000449811 METTL16Q86W50 562 aaKnown RBP16.87■□□□□ 0.29
CPSF7-207ENST00000449811 FOXP4Q8IVH2 680 aaPredicted RBP16.87■□□□□ 0.29
CPSF7-207ENST00000449811 TGFBRAP1Q8WUH2 860 aa16.87■□□□□ 0.29
CPSF7-207ENST00000449811 SMC4Q9NTJ3 1288 aa16.87■□□□□ 0.29
CPSF7-207ENST00000449811 AATFQ9NY61 560 aaKnown RBP eCLIP16.87■□□□□ 0.29
CPSF7-207ENST00000449811 LRP2BPQ9P2M1 347 aa16.87■□□□□ 0.29
CPSF7-207ENST00000449811 ATP11BQ9Y2G3 1177 aa16.87■□□□□ 0.29
CPSF7-207ENST00000449811 RABGAP1Q9Y3P9 1069 aa16.87■□□□□ 0.29
CPSF7-207ENST00000449811 NDUFB9Q9Y6M9 179 aa16.87■□□□□ 0.29
CPSF7-207ENST00000449811 CNMDO75829 334 aa16.86■□□□□ 0.29
CPSF7-207ENST00000449811 BAG3O95817 575 aa16.86■□□□□ 0.29
CPSF7-207ENST00000449811 PLCG2P16885 1265 aa16.86■□□□□ 0.29
CPSF7-207ENST00000449811 ARID4AP29374 1257 aaPredicted RBP16.86■□□□□ 0.29
CPSF7-207ENST00000449811 ATP2B2Q01814 1243 aa16.86■□□□□ 0.29
CPSF7-207ENST00000449811 C9orf50Q5SZB4 431 aa16.86■□□□□ 0.29
CPSF7-207ENST00000449811 MAPKAPK5Q8IW41 473 aa16.86■□□□□ 0.29
CPSF7-207ENST00000449811 MYLIPQ8WY64 445 aa16.86■□□□□ 0.29
CPSF7-207ENST00000449811 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.86■□□□□ 0.29
CPSF7-207ENST00000449811 LTBP2Q14767 1821 aa16.86■□□□□ 0.29
CPSF7-207ENST00000449811 SLC15A5A6NIM6 579 aa16.85■□□□□ 0.29
CPSF7-207ENST00000449811 E9PSI1 815 aa16.85■□□□□ 0.29
CPSF7-207ENST00000449811 SRGAP3O43295 1099 aa16.85■□□□□ 0.29
CPSF7-207ENST00000449811 PTPREP23469 700 aa16.85■□□□□ 0.29
CPSF7-207ENST00000449811 MCAMP43121 646 aa16.85■□□□□ 0.29
CPSF7-207ENST00000449811 NAA16Q6N069 864 aaPredicted RBP16.85■□□□□ 0.29
CPSF7-207ENST00000449811 MEIS3Q99687 375 aa16.85■□□□□ 0.29
CPSF7-207ENST00000449811 PRDM5Q9NQX1 630 aaPredicted RBP16.85■□□□□ 0.29
CPSF7-207ENST00000449811 PALD1Q9ULE6 856 aa16.85■□□□□ 0.29
CPSF7-207ENST00000449811 IVNS1ABPQ9Y6Y0 642 aa16.85■□□□□ 0.29
CPSF7-207ENST00000449811 FLT1P17948 1338 aa16.85■□□□□ 0.29
CPSF7-207ENST00000449811 USP17L15C9J2P7 530 aa16.84■□□□□ 0.29
CPSF7-207ENST00000449811 USP17L13C9JLJ4 530 aa16.84■□□□□ 0.29
CPSF7-207ENST00000449811 USP17L11C9JVI0 530 aa16.84■□□□□ 0.29
CPSF7-207ENST00000449811 USP17L18D6R9N7 530 aa16.84■□□□□ 0.29
CPSF7-207ENST00000449811 USP17L22D6RA61 530 aa16.84■□□□□ 0.29
CPSF7-207ENST00000449811 USP17L17D6RBQ6 530 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms