RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 PCDHA7Q9UN72 937 aa18.66■□□□□ 0.58
AP000253.1-201ENST00000449339 GOLGB1Q14789 3259 aaKnown RBP18.66■□□□□ 0.58
AP000253.1-201ENST00000449339 STK36Q9NRP7 1315 aa18.66■□□□□ 0.58
AP000253.1-201ENST00000449339 GPR75-ASB3A0A0A6YYF3 556 aa18.66■□□□□ 0.58
AP000253.1-201ENST00000449339 ORC4O43929 436 aa18.66■□□□□ 0.58
AP000253.1-201ENST00000449339 YEATS4O95619 227 aa18.66■□□□□ 0.58
AP000253.1-201ENST00000449339 SSRP1Q08945 709 aaKnown RBP18.66■□□□□ 0.58
AP000253.1-201ENST00000449339 SNW1Q13573 536 aaKnown RBP18.66■□□□□ 0.58
AP000253.1-201ENST00000449339 STK38Q15208 465 aa18.66■□□□□ 0.58
AP000253.1-201ENST00000449339 C12orf60Q5U649 245 aa18.66■□□□□ 0.58
AP000253.1-201ENST00000449339 FAM200AQ8TCP9 573 aa18.66■□□□□ 0.58
AP000253.1-201ENST00000449339 KCNG4Q8TDN1 519 aa18.66■□□□□ 0.58
AP000253.1-201ENST00000449339 IGSF3O75054 1194 aa18.65■□□□□ 0.58
AP000253.1-201ENST00000449339 FMNL1O95466 1100 aaPredicted RBP18.65■□□□□ 0.58
AP000253.1-201ENST00000449339 RCAN1P53805 252 aa18.65■□□□□ 0.58
AP000253.1-201ENST00000449339 FAM160A1Q05DH4 1040 aa18.65■□□□□ 0.58
AP000253.1-201ENST00000449339 TRIM29Q14134 588 aa18.65■□□□□ 0.58
AP000253.1-201ENST00000449339 SF3A1Q15459 793 aaKnown RBP18.65■□□□□ 0.58
AP000253.1-201ENST00000449339 ADALQ6DHV7 355 aa18.65■□□□□ 0.58
AP000253.1-201ENST00000449339 TMX4Q9H1E5 349 aaPredicted RBP18.65■□□□□ 0.58
AP000253.1-201ENST00000449339 SLC3A2P08195 630 aaKnown RBP18.65■□□□□ 0.58
AP000253.1-201ENST00000449339 PCP11498 1178 aaKnown RBP18.65■□□□□ 0.58
AP000253.1-201ENST00000449339 GUCY1A2P33402 732 aa18.65■□□□□ 0.58
AP000253.1-201ENST00000449339 IFIT1BQ5T764 474 aaKnown RBP18.65■□□□□ 0.58
AP000253.1-201ENST00000449339 STYK1Q6J9G0 422 aa18.65■□□□□ 0.58
AP000253.1-201ENST00000449339 IQCA1Q86XH1 822 aa18.65■□□□□ 0.58
AP000253.1-201ENST00000449339 TEX11Q8IYF3 940 aa18.65■□□□□ 0.58
AP000253.1-201ENST00000449339 FSIP1Q8NA03 581 aa18.65■□□□□ 0.58
AP000253.1-201ENST00000449339 ENGASEQ8NFI3 743 aa18.65■□□□□ 0.58
AP000253.1-201ENST00000449339 KCNQ5Q9NR82 932 aa18.65■□□□□ 0.58
AP000253.1-201ENST00000449339 CCDC39Q9UFE4 941 aa18.65■□□□□ 0.58
AP000253.1-201ENST00000449339 NOL7Q9UMY1 257 aaKnown RBP18.65■□□□□ 0.58
AP000253.1-201ENST00000449339 DLEC1Q9Y238 1755 aa18.65■□□□□ 0.58
AP000253.1-201ENST00000449339 QSER1Q2KHR3 1735 aa18.64■□□□□ 0.58
AP000253.1-201ENST00000449339 CCDC196A0A1B0GTZ2 297 aa18.64■□□□□ 0.57
AP000253.1-201ENST00000449339 ADCY5O95622 1261 aa18.64■□□□□ 0.57
AP000253.1-201ENST00000449339 MSNP26038 577 aaKnown RBP18.64■□□□□ 0.57
AP000253.1-201ENST00000449339 PLCD1P51178 756 aa18.64■□□□□ 0.57
AP000253.1-201ENST00000449339 SASS6Q6UVJ0 657 aa18.64■□□□□ 0.57
AP000253.1-201ENST00000449339 FANCBQ8NB91 859 aa18.64■□□□□ 0.57
AP000253.1-201ENST00000449339 UBE2Q2Q8WVN8 375 aa18.64■□□□□ 0.57
AP000253.1-201ENST00000449339 DBNDD1Q9H9R9 158 aa18.64■□□□□ 0.57
AP000253.1-201ENST00000449339 SPTLC2O15270 562 aa18.64■□□□□ 0.57
AP000253.1-201ENST00000449339 KINO60870 393 aaKnown RBP18.64■□□□□ 0.57
AP000253.1-201ENST00000449339 RHBDL3P58872 404 aa18.64■□□□□ 0.57
AP000253.1-201ENST00000449339 PDE4BQ07343 736 aa18.64■□□□□ 0.57
AP000253.1-201ENST00000449339 GNL2Q13823 731 aaKnown RBP18.64■□□□□ 0.57
AP000253.1-201ENST00000449339 ANO6Q4KMQ2 910 aa18.64■□□□□ 0.57
AP000253.1-201ENST00000449339 ANO1Q5XXA6 986 aa18.64■□□□□ 0.57
AP000253.1-201ENST00000449339 SLC44A5Q8NCS7 719 aa18.64■□□□□ 0.57
AP000253.1-201ENST00000449339 MRPS27Q92552 414 aaKnown RBP18.64■□□□□ 0.57
AP000253.1-201ENST00000449339 WASF1Q92558 559 aa18.64■□□□□ 0.57
AP000253.1-201ENST00000449339 DAGLAQ9Y4D2 1042 aa18.64■□□□□ 0.57
AP000253.1-201ENST00000449339 GAKO14976 1311 aa18.63■□□□□ 0.57
AP000253.1-201ENST00000449339 A0A1W2PQ27 194 aa18.63■□□□□ 0.57
AP000253.1-201ENST00000449339 A0A1W2PQ64 194 aa18.63■□□□□ 0.57
AP000253.1-201ENST00000449339 A0A1W2PQD8 194 aa18.63■□□□□ 0.57
AP000253.1-201ENST00000449339 G3V3G9 751 aa18.63■□□□□ 0.57
AP000253.1-201ENST00000449339 CTAGE5O15320 804 aa18.63■□□□□ 0.57
AP000253.1-201ENST00000449339 DCAF8Q5TAQ9 597 aa18.63■□□□□ 0.57
AP000253.1-201ENST00000449339 TRIM22Q8IYM9 498 aa18.63■□□□□ 0.57
AP000253.1-201ENST00000449339 ADAMTSL1Q8N6G6 1762 aa18.63■□□□□ 0.57
AP000253.1-201ENST00000449339 SF3B2Q13435 895 aaKnown RBP18.62■□□□□ 0.57
AP000253.1-201ENST00000449339 NBPF11Q86T75 865 aa18.62■□□□□ 0.57
AP000253.1-201ENST00000449339 TSPY2A6NKD2 308 aa18.62■□□□□ 0.57
AP000253.1-201ENST00000449339 PTMAP06454 111 aaKnown RBP18.62■□□□□ 0.57
AP000253.1-201ENST00000449339 U2AF2P26368 475 aaKnown RBP eCLIP18.62■□□□□ 0.57
AP000253.1-201ENST00000449339 BAG6P46379 1132 aa18.62■□□□□ 0.57
AP000253.1-201ENST00000449339 FAM163AQ96GL9 167 aaPredicted RBP18.62■□□□□ 0.57
AP000253.1-201ENST00000449339 SCNN1DP51172 638 aa18.61■□□□□ 0.57
AP000253.1-201ENST00000449339 PLCB2Q00722 1185 aa18.61■□□□□ 0.57
AP000253.1-201ENST00000449339 CRACR2BQ8N4Y2 399 aaPredicted RBP18.61■□□□□ 0.57
AP000253.1-201ENST00000449339 EYA3Q99504 573 aa18.61■□□□□ 0.57
AP000253.1-201ENST00000449339 TTF2Q9UNY4 1162 aaKnown RBP18.61■□□□□ 0.57
AP000253.1-201ENST00000449339 FLT1P17948 1338 aa18.61■□□□□ 0.57
AP000253.1-201ENST00000449339 MYH1P12882 1939 aa18.61■□□□□ 0.57
AP000253.1-201ENST00000449339 A0A1B0GVL5 298 aa18.61■□□□□ 0.57
AP000253.1-201ENST00000449339 TFAP4Q01664 338 aa18.61■□□□□ 0.57
AP000253.1-201ENST00000449339 CATIPQ7Z7H3 387 aa18.61■□□□□ 0.57
AP000253.1-201ENST00000449339 SLF2Q8IX21 1173 aa18.61■□□□□ 0.57
AP000253.1-201ENST00000449339 FMR1NBQ8N0W7 255 aaPredicted RBP18.61■□□□□ 0.57
AP000253.1-201ENST00000449339 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.61■□□□□ 0.57
AP000253.1-201ENST00000449339 MYH6P13533 1939 aa18.61■□□□□ 0.57
AP000253.1-201ENST00000449339 SLC39A14Q15043 492 aa18.6■□□□□ 0.57
AP000253.1-201ENST00000449339 PPP2R5BQ15173 497 aa18.6■□□□□ 0.57
AP000253.1-201ENST00000449339 LUZP1Q86V48 1076 aa18.6■□□□□ 0.57
AP000253.1-201ENST00000449339 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.6■□□□□ 0.57
AP000253.1-201ENST00000449339 ZKSCAN5Q9Y2L8 839 aa18.6■□□□□ 0.57
AP000253.1-201ENST00000449339 DDX60LQ5H9U9 1706 aaKnown RBP18.6■□□□□ 0.57
AP000253.1-201ENST00000449339 ROBO3Q96MS0 1386 aa18.6■□□□□ 0.57
AP000253.1-201ENST00000449339 SCN9AQ15858 1988 aa18.6■□□□□ 0.57
AP000253.1-201ENST00000449339 AP5Z1O43299 807 aa18.59■□□□□ 0.57
AP000253.1-201ENST00000449339 PLEKHA8P1O95397 391 aa18.59■□□□□ 0.57
AP000253.1-201ENST00000449339 DEXIO95424 95 aa18.59■□□□□ 0.57
AP000253.1-201ENST00000449339 TROAPQ12815 778 aa18.59■□□□□ 0.57
AP000253.1-201ENST00000449339 AMOTL1Q8IY63 956 aa18.59■□□□□ 0.57
AP000253.1-201ENST00000449339 CNKSR1Q969H4 720 aa18.59■□□□□ 0.57
AP000253.1-201ENST00000449339 MKNK2Q9HBH9 465 aa18.59■□□□□ 0.57
AP000253.1-201ENST00000449339 CBX8Q9HC52 389 aa18.59■□□□□ 0.57
AP000253.1-201ENST00000449339 IL17RBQ9NRM6 502 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms