RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 ZNF287Q9HBT7 754 aa13.78□□□□□ -0.2
LINC00408-201ENST00000447784 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.78□□□□□ -0.2
LINC00408-201ENST00000447784 SERPINB13Q9UIV8 391 aa13.78□□□□□ -0.2
LINC00408-201ENST00000447784 ZNF213O14771 459 aa13.77□□□□□ -0.21
LINC00408-201ENST00000447784 TBC1D12O60347 775 aa13.77□□□□□ -0.21
LINC00408-201ENST00000447784 TBC1D8O95759 1140 aa13.77□□□□□ -0.21
LINC00408-201ENST00000447784 COL2A1P02458 1487 aaPredicted RBP13.77□□□□□ -0.21
LINC00408-201ENST00000447784 CYP2D6P10635 497 aa13.77□□□□□ -0.21
LINC00408-201ENST00000447784 INPP5BP32019 993 aa13.77□□□□□ -0.21
LINC00408-201ENST00000447784 PPATQ06203 517 aa13.77□□□□□ -0.21
LINC00408-201ENST00000447784 C12orf60Q5U649 245 aa13.77□□□□□ -0.21
LINC00408-201ENST00000447784 OTUD5Q96G74 571 aa13.77□□□□□ -0.21
LINC00408-201ENST00000447784 EHD4Q9H223 541 aa13.77□□□□□ -0.21
LINC00408-201ENST00000447784 IL25Q9H293 177 aa13.77□□□□□ -0.21
LINC00408-201ENST00000447784 EPB41L4AQ9HCS5 686 aaPredicted RBP13.77□□□□□ -0.21
LINC00408-201ENST00000447784 HERC5Q9UII4 1024 aaKnown RBP13.77□□□□□ -0.21
LINC00408-201ENST00000447784 TAOK2Q9UL54 1235 aa13.77□□□□□ -0.21
LINC00408-201ENST00000447784 CYP2D7A0A087X1C5 515 aa13.76□□□□□ -0.21
LINC00408-201ENST00000447784 PHF20L1A8MW92 1017 aa13.76□□□□□ -0.21
LINC00408-201ENST00000447784 GPR25O00155 361 aa13.76□□□□□ -0.21
LINC00408-201ENST00000447784 IGF2BP3O00425 579 aaKnown RBP eCLIP13.76□□□□□ -0.21
LINC00408-201ENST00000447784 PLCD1P51178 756 aa13.76□□□□□ -0.21
LINC00408-201ENST00000447784 PTH1RQ03431 593 aa13.76□□□□□ -0.21
LINC00408-201ENST00000447784 PPARAQ07869 468 aa13.76□□□□□ -0.21
LINC00408-201ENST00000447784 PPIL2Q13356 520 aa13.76□□□□□ -0.21
LINC00408-201ENST00000447784 RNF20Q5VTR2 975 aa13.76□□□□□ -0.21
LINC00408-201ENST00000447784 MAP4K1Q92918 833 aa13.76□□□□□ -0.21
LINC00408-201ENST00000447784 PTPN18Q99952 460 aa13.76□□□□□ -0.21
LINC00408-201ENST00000447784 MKNK2Q9HBH9 465 aa13.76□□□□□ -0.21
LINC00408-201ENST00000447784 SWAP70Q9UH65 585 aa13.76□□□□□ -0.21
LINC00408-201ENST00000447784 ZMYM6O95789 1325 aa13.75□□□□□ -0.21
LINC00408-201ENST00000447784 IRF6O14896 467 aa13.75□□□□□ -0.21
LINC00408-201ENST00000447784 CETPP11597 493 aa13.75□□□□□ -0.21
LINC00408-201ENST00000447784 MCCP23508 829 aa13.75□□□□□ -0.21
LINC00408-201ENST00000447784 PDE4BQ07343 736 aa13.75□□□□□ -0.21
LINC00408-201ENST00000447784 SNAPC2Q13487 334 aa13.75□□□□□ -0.21
LINC00408-201ENST00000447784 STK11IPQ8N1F8 1099 aa13.75□□□□□ -0.21
LINC00408-201ENST00000447784 BRI3BPQ8WY22 251 aa13.75□□□□□ -0.21
LINC00408-201ENST00000447784 LSG1Q9H089 658 aaKnown RBP13.75□□□□□ -0.21
LINC00408-201ENST00000447784 RNF41Q9H4P4 317 aaPredicted RBP13.75□□□□□ -0.21
LINC00408-201ENST00000447784 ZCCHC17Q9NP64 241 aaKnown RBP13.75□□□□□ -0.21
LINC00408-201ENST00000447784 TOMM22Q9NS69 142 aa13.75□□□□□ -0.21
LINC00408-201ENST00000447784 RBM8AQ9Y5S9 174 aaKnown RBP13.75□□□□□ -0.21
LINC00408-201ENST00000447784 MAST2Q6P0Q8 1798 aa13.75□□□□□ -0.21
LINC00408-201ENST00000447784 CCL15-CCL14A0A0B4J2E2 113 aa13.74□□□□□ -0.21
LINC00408-201ENST00000447784 FOXP2O15409 715 aa13.74□□□□□ -0.21
LINC00408-201ENST00000447784 CTNND1O60716 968 aaKnown RBP13.74□□□□□ -0.21
LINC00408-201ENST00000447784 ZKSCAN1P17029 563 aaPredicted RBP13.74□□□□□ -0.21
LINC00408-201ENST00000447784 HAND2P61296 217 aa13.74□□□□□ -0.21
LINC00408-201ENST00000447784 CCL15Q16663 113 aa13.74□□□□□ -0.21
LINC00408-201ENST00000447784 SCYL3Q8IZE3 742 aa13.74□□□□□ -0.21
LINC00408-201ENST00000447784 ZNF444Q8N0Y2 327 aaPredicted RBP13.74□□□□□ -0.21
LINC00408-201ENST00000447784 ZNF296Q8WUU4 475 aaPredicted RBP13.74□□□□□ -0.21
LINC00408-201ENST00000447784 DYNLL2Q96FJ2 89 aa13.74□□□□□ -0.21
LINC00408-201ENST00000447784 UPF2Q9HAU5 1272 aaKnown RBP13.74□□□□□ -0.21
LINC00408-201ENST00000447784 KCNH4Q9UQ05 1017 aa13.74□□□□□ -0.21
LINC00408-201ENST00000447784 MYH2Q9UKX2 1941 aa13.73□□□□□ -0.21
LINC00408-201ENST00000447784 EPB41L2O43491 1005 aaKnown RBP13.73□□□□□ -0.21
LINC00408-201ENST00000447784 PCP11498 1178 aaKnown RBP13.73□□□□□ -0.21
LINC00408-201ENST00000447784 DSG3P32926 999 aa13.73□□□□□ -0.21
LINC00408-201ENST00000447784 DGKZQ13574 1117 aa13.73□□□□□ -0.21
LINC00408-201ENST00000447784 MFSD6Q6ZSS7 791 aa13.73□□□□□ -0.21
LINC00408-201ENST00000447784 MCOLN1Q9GZU1 580 aa13.73□□□□□ -0.21
LINC00408-201ENST00000447784 ANAPC4Q9UJX5 808 aa13.73□□□□□ -0.21
LINC00408-201ENST00000447784 FAM196BA6NMK8 535 aa13.72□□□□□ -0.21
LINC00408-201ENST00000447784 CXCL11O14625 94 aa13.72□□□□□ -0.21
LINC00408-201ENST00000447784 FKTNO75072 461 aa13.72□□□□□ -0.21
LINC00408-201ENST00000447784 CDK8P49336 464 aa13.72□□□□□ -0.21
LINC00408-201ENST00000447784 CTDSPL2Q05D32 466 aa13.72□□□□□ -0.21
LINC00408-201ENST00000447784 TRDNQ13061 729 aa13.72□□□□□ -0.21
LINC00408-201ENST00000447784 C8orf34Q49A92 452 aa13.72□□□□□ -0.21
LINC00408-201ENST00000447784 CERKLQ49MI3 558 aaPredicted RBP13.72□□□□□ -0.21
LINC00408-201ENST00000447784 C16orf86Q6ZW13 317 aa13.72□□□□□ -0.21
LINC00408-201ENST00000447784 CTU1Q7Z7A3 348 aaKnown RBP13.72□□□□□ -0.21
LINC00408-201ENST00000447784 METTL16Q86W50 562 aaKnown RBP13.72□□□□□ -0.21
LINC00408-201ENST00000447784 ABHD8Q96I13 439 aa13.72□□□□□ -0.21
LINC00408-201ENST00000447784 CCDC17Q96LX7 622 aa13.72□□□□□ -0.21
LINC00408-201ENST00000447784 R3HDMLQ9H3Y0 253 aa13.72□□□□□ -0.21
LINC00408-201ENST00000447784 CABP5Q9NP86 173 aa13.72□□□□□ -0.21
LINC00408-201ENST00000447784 PICK1Q9NRD5 415 aa13.72□□□□□ -0.21
LINC00408-201ENST00000447784 DOCK2Q92608 1830 aa13.71□□□□□ -0.21
LINC00408-201ENST00000447784 MPHOSPH10O00566 681 aaKnown RBP13.71□□□□□ -0.21
LINC00408-201ENST00000447784 PTPRAP18433 802 aa13.71□□□□□ -0.21
LINC00408-201ENST00000447784 GABPAQ06546 454 aa13.71□□□□□ -0.21
LINC00408-201ENST00000447784 CRHR2Q13324 411 aa13.71□□□□□ -0.21
LINC00408-201ENST00000447784 PKN2Q16513 984 aaKnown RBP13.71□□□□□ -0.21
LINC00408-201ENST00000447784 RRP12Q5JTH9 1297 aaKnown RBP13.71□□□□□ -0.21
LINC00408-201ENST00000447784 AKNAD1Q5T1N1 836 aa13.71□□□□□ -0.21
LINC00408-201ENST00000447784 TATDN1Q6P1N9 297 aa13.71□□□□□ -0.21
LINC00408-201ENST00000447784 FAM43AQ8N2R8 423 aa13.71□□□□□ -0.21
LINC00408-201ENST00000447784 SLC44A5Q8NCS7 719 aa13.71□□□□□ -0.21
LINC00408-201ENST00000447784 CNNM2Q9H8M5 875 aa13.71□□□□□ -0.21
LINC00408-201ENST00000447784 ZFYVE28Q9HCC9 887 aa13.71□□□□□ -0.21
LINC00408-201ENST00000447784 OTOFQ9HC10 1997 aa13.71□□□□□ -0.22
LINC00408-201ENST00000447784 BTBD19C9JJ37 291 aa13.7□□□□□ -0.22
LINC00408-201ENST00000447784 SLC27A2O14975 620 aa13.7□□□□□ -0.22
LINC00408-201ENST00000447784 RANBP6O60518 1105 aaKnown RBP13.7□□□□□ -0.22
LINC00408-201ENST00000447784 PRDM1O75626 825 aa13.7□□□□□ -0.22
LINC00408-201ENST00000447784 MYCNP04198 464 aaPredicted RBP13.7□□□□□ -0.22
LINC00408-201ENST00000447784 SLURP2P0DP57 97 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms