RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 PTCD1O75127 700 aaKnown RBP18.13■□□□□ 0.49
CNOT3-204ENST00000447684 IFIT1P09914 478 aaKnown RBP18.13■□□□□ 0.49
CNOT3-204ENST00000447684 AFMP43652 599 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 METAP2P50579 478 aaKnown RBP eCLIP18.13■□□□□ 0.49
CNOT3-204ENST00000447684 MDM2Q00987 491 aaPredicted RBP18.13■□□□□ 0.49
CNOT3-204ENST00000447684 PDIA6Q15084 440 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 C1orf141Q5JVX7 400 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 CNGA4Q8IV77 575 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 OSBP2Q969R2 916 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 SEC31BQ9NQW1 1179 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 TFR2Q9UP52 801 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 GYPCP04921 128 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 CASP1P29466 404 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 PLCD1P51178 756 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 ERVK-24P63145 666 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 MORC3Q14149 939 aa18.13■□□□□ 0.49
CNOT3-204ENST00000447684 LRRC59Q96AG4 307 aaKnown RBP18.13■□□□□ 0.49
CNOT3-204ENST00000447684 MYO1FO00160 1098 aa18.12■□□□□ 0.49
CNOT3-204ENST00000447684 GBP6Q6ZN66 633 aa18.12■□□□□ 0.49
CNOT3-204ENST00000447684 COPS6Q7L5N1 327 aa18.12■□□□□ 0.49
CNOT3-204ENST00000447684 SELENOOQ9BVL4 669 aa18.12■□□□□ 0.49
CNOT3-204ENST00000447684 MYBL2P10244 700 aa18.12■□□□□ 0.49
CNOT3-204ENST00000447684 ANTXR2P58335 489 aa18.12■□□□□ 0.49
CNOT3-204ENST00000447684 NCOA7Q8NI08 942 aa18.12■□□□□ 0.49
CNOT3-204ENST00000447684 DONSONQ9NYP3 566 aa18.12■□□□□ 0.49
CNOT3-204ENST00000447684 SYNRGQ9UMZ2 1314 aa18.11■□□□□ 0.49
CNOT3-204ENST00000447684 FGAP02671 866 aa18.11■□□□□ 0.49
CNOT3-204ENST00000447684 ARHGAP25P42331 645 aa18.11■□□□□ 0.49
CNOT3-204ENST00000447684 AMOTQ4VCS5 1084 aa18.11■□□□□ 0.49
CNOT3-204ENST00000447684 POTEDQ86YR6 584 aa18.11■□□□□ 0.49
CNOT3-204ENST00000447684 MYL10Q9BUA6 226 aa18.11■□□□□ 0.49
CNOT3-204ENST00000447684 DENND2AQ9ULE3 1009 aa18.11■□□□□ 0.49
CNOT3-204ENST00000447684 SIPA1L3O60292 1781 aaPredicted RBP18.11■□□□□ 0.49
CNOT3-204ENST00000447684 FKBP15Q5T1M5 1219 aa18.11■□□□□ 0.49
CNOT3-204ENST00000447684 CPLX2Q6PUV4 134 aaKnown RBP18.11■□□□□ 0.49
CNOT3-204ENST00000447684 POLD4Q9HCU8 107 aa18.11■□□□□ 0.49
CNOT3-204ENST00000447684 KIAA0754O94854 1291 aa18.1■□□□□ 0.49
CNOT3-204ENST00000447684 MCM3P25205 808 aa18.1■□□□□ 0.49
CNOT3-204ENST00000447684 AMPD2Q01433 879 aa18.1■□□□□ 0.49
CNOT3-204ENST00000447684 PLPPR3Q6T4P5 718 aa18.1■□□□□ 0.49
CNOT3-204ENST00000447684 TMTC1Q8IUR5 882 aa18.1■□□□□ 0.49
CNOT3-204ENST00000447684 GIMAP7Q8NHV1 300 aa18.1■□□□□ 0.49
CNOT3-204ENST00000447684 NBPF3Q9H094 633 aa18.1■□□□□ 0.49
CNOT3-204ENST00000447684 VPS16Q9H269 839 aa18.1■□□□□ 0.49
CNOT3-204ENST00000447684 ADD3Q9UEY8 706 aaKnown RBP18.1■□□□□ 0.49
CNOT3-204ENST00000447684 NFAT5O94916 1531 aa18.1■□□□□ 0.49
CNOT3-204ENST00000447684 CCDC196A0A1B0GTZ2 297 aa18.1■□□□□ 0.49
CNOT3-204ENST00000447684 NDUFAB1O14561 156 aa18.1■□□□□ 0.49
CNOT3-204ENST00000447684 N4BP3O15049 544 aa18.1■□□□□ 0.49
CNOT3-204ENST00000447684 MRPS25P82663 173 aaKnown RBP18.1■□□□□ 0.49
CNOT3-204ENST00000447684 SLC39A6Q13433 755 aa18.1■□□□□ 0.49
CNOT3-204ENST00000447684 NFXL1Q6ZNB6 911 aa18.1■□□□□ 0.49
CNOT3-204ENST00000447684 USP49Q70CQ1 688 aa18.1■□□□□ 0.49
CNOT3-204ENST00000447684 MB21D2Q8IYB1 491 aaPredicted RBP18.1■□□□□ 0.49
CNOT3-204ENST00000447684 AGPSO00116 658 aa18.09■□□□□ 0.49
CNOT3-204ENST00000447684 PES1O00541 588 aaKnown RBP18.09■□□□□ 0.49
CNOT3-204ENST00000447684 A1BGP04217 495 aa18.09■□□□□ 0.49
CNOT3-204ENST00000447684 ATP1A1P05023 1023 aaKnown RBP18.09■□□□□ 0.49
CNOT3-204ENST00000447684 PPFIA1Q13136 1202 aa18.09■□□□□ 0.49
CNOT3-204ENST00000447684 LMBR1LQ6UX01 489 aa18.09■□□□□ 0.49
CNOT3-204ENST00000447684 METTL22Q9BUU2 404 aaPredicted RBP18.09■□□□□ 0.49
CNOT3-204ENST00000447684 CENPHQ9H3R5 247 aa18.09■□□□□ 0.49
CNOT3-204ENST00000447684 SETD1BQ9UPS6 1966 aaKnown RBP18.09■□□□□ 0.49
CNOT3-204ENST00000447684 A0A087WZG4 1122 aa18.09■□□□□ 0.49
CNOT3-204ENST00000447684 FAM237AA0A1B0GTK4 181 aa18.09■□□□□ 0.49
CNOT3-204ENST00000447684 ZNF213O14771 459 aa18.09■□□□□ 0.49
CNOT3-204ENST00000447684 SHOX2O60902 331 aaPredicted RBP18.09■□□□□ 0.49
CNOT3-204ENST00000447684 CYP26C1Q6V0L0 522 aa18.09■□□□□ 0.49
CNOT3-204ENST00000447684 TICAM2Q86XR7 235 aa18.09■□□□□ 0.49
CNOT3-204ENST00000447684 OTUD6BQ8N6M0 293 aa18.09■□□□□ 0.49
CNOT3-204ENST00000447684 SAR1BQ9Y6B6 198 aa18.09■□□□□ 0.49
CNOT3-204ENST00000447684 ZC3H4Q9UPT8 1303 aaKnown RBP18.09■□□□□ 0.49
CNOT3-204ENST00000447684 RNF225M0QZC1 329 aaPredicted RBP18.08■□□□□ 0.49
CNOT3-204ENST00000447684 KRT9P35527 623 aa18.08■□□□□ 0.49
CNOT3-204ENST00000447684 IARSP41252 1262 aaKnown RBP18.08■□□□□ 0.49
CNOT3-204ENST00000447684 TDO2P48775 406 aa18.08■□□□□ 0.49
CNOT3-204ENST00000447684 RABL6Q3YEC7 729 aaPredicted RBP18.08■□□□□ 0.49
CNOT3-204ENST00000447684 SPATA1Q5VX52 437 aa18.08■□□□□ 0.49
CNOT3-204ENST00000447684 SND1Q7KZF4 910 aaKnown RBP eCLIP18.08■□□□□ 0.49
CNOT3-204ENST00000447684 APTXQ7Z2E3 356 aaKnown RBP18.08■□□□□ 0.49
CNOT3-204ENST00000447684 CCDC82Q8N4S0 544 aa18.08■□□□□ 0.49
CNOT3-204ENST00000447684 CHP1Q99653 195 aa18.08■□□□□ 0.49
CNOT3-204ENST00000447684 SLC26A6Q9BXS9 759 aa18.08■□□□□ 0.49
CNOT3-204ENST00000447684 ABHD10Q9NUJ1 306 aa18.08■□□□□ 0.49
CNOT3-204ENST00000447684 BTBD18B2RXH4 712 aa18.08■□□□□ 0.48
CNOT3-204ENST00000447684 EIF3HO15372 352 aaKnown RBP eCLIP18.08■□□□□ 0.48
CNOT3-204ENST00000447684 ZEB2O60315 1214 aa18.08■□□□□ 0.48
CNOT3-204ENST00000447684 CDKL5O76039 1030 aa18.08■□□□□ 0.48
CNOT3-204ENST00000447684 CD44P16070 742 aaKnown RBP18.08■□□□□ 0.48
CNOT3-204ENST00000447684 RDXP35241 583 aaKnown RBP18.08■□□□□ 0.48
CNOT3-204ENST00000447684 ANKRD18AQ8IVF6 992 aa18.08■□□□□ 0.48
CNOT3-204ENST00000447684 CABS1Q96KC9 395 aa18.08■□□□□ 0.48
CNOT3-204ENST00000447684 CD248Q9HCU0 757 aa18.08■□□□□ 0.48
CNOT3-204ENST00000447684 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.08■□□□□ 0.48
CNOT3-204ENST00000447684 ERCC5P28715 1186 aaPredicted RBP18.07■□□□□ 0.48
CNOT3-204ENST00000447684 ATP2B2Q01814 1243 aa18.07■□□□□ 0.48
CNOT3-204ENST00000447684 PDCLQ13371 301 aa18.07■□□□□ 0.48
CNOT3-204ENST00000447684 TRAPPC11Q7Z392 1133 aa18.07■□□□□ 0.48
CNOT3-204ENST00000447684 CTAGE1Q96RT6 745 aa18.07■□□□□ 0.48
CNOT3-204ENST00000447684 SENP2Q9HC62 589 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms