RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 XRCC5P13010 732 aaKnown RBP29.89■■■□□ 2.38
PMS1-214ENST00000446877 PRKAR2AP13861 404 aaKnown RBP29.89■■■□□ 2.38
PMS1-214ENST00000446877 TRMT44Q8IYL2 757 aaKnown RBP29.89■■■□□ 2.38
PMS1-214ENST00000446877 FRAT1Q92837 279 aaPredicted RBP29.89■■■□□ 2.38
PMS1-214ENST00000446877 DOCK3Q8IZD9 2030 aa29.88■■■□□ 2.37
PMS1-214ENST00000446877 TRIM27P14373 513 aa29.88■■■□□ 2.37
PMS1-214ENST00000446877 MAPK4P31152 587 aa29.88■■■□□ 2.37
PMS1-214ENST00000446877 OS9Q13438 667 aaPredicted RBP29.88■■■□□ 2.37
PMS1-214ENST00000446877 GPR108Q9NPR9 543 aa29.88■■■□□ 2.37
PMS1-214ENST00000446877 PALD1Q9ULE6 856 aa29.88■■■□□ 2.37
PMS1-214ENST00000446877 ATF7IPQ6VMQ6 1270 aa29.87■■■□□ 2.37
PMS1-214ENST00000446877 METTL16Q86W50 562 aaKnown RBP29.87■■■□□ 2.37
PMS1-214ENST00000446877 FLT1P17948 1338 aa29.87■■■□□ 2.37
PMS1-214ENST00000446877 A0A0C4DFX4 3053 aa29.86■■■□□ 2.37
PMS1-214ENST00000446877 DLL1O00548 723 aa29.86■■■□□ 2.37
PMS1-214ENST00000446877 GDF11O95390 407 aa29.86■■■□□ 2.37
PMS1-214ENST00000446877 HLA-DOAP06340 250 aa29.86■■■□□ 2.37
PMS1-214ENST00000446877 ZKSCAN1P17029 563 aaPredicted RBP29.86■■■□□ 2.37
PMS1-214ENST00000446877 JAG1P78504 1218 aa29.86■■■□□ 2.37
PMS1-214ENST00000446877 MAP3K21Q5TCX8 1036 aa29.86■■■□□ 2.37
PMS1-214ENST00000446877 GTF3C2Q8WUA4 911 aaPredicted RBP29.86■■■□□ 2.37
PMS1-214ENST00000446877 TXNRD2Q9NNW7 524 aa29.86■■■□□ 2.37
PMS1-214ENST00000446877 RBPJLQ9UBG7 517 aa29.86■■■□□ 2.37
PMS1-214ENST00000446877 ZBTB21Q9ULJ3 1066 aa29.86■■■□□ 2.37
PMS1-214ENST00000446877 LOC285556D6RIA3 1793 aa29.85■■■□□ 2.37
PMS1-214ENST00000446877 PEX10O60683 326 aa29.85■■■□□ 2.37
PMS1-214ENST00000446877 SYN1P17600 705 aa29.85■■■□□ 2.37
PMS1-214ENST00000446877 MNX1P50219 401 aaPredicted RBP29.85■■■□□ 2.37
PMS1-214ENST00000446877 TNNI3KQ59H18 835 aa29.85■■■□□ 2.37
PMS1-214ENST00000446877 CLUAP1Q96AJ1 413 aa29.85■■■□□ 2.37
PMS1-214ENST00000446877 DNAJC18Q9H819 358 aa29.85■■■□□ 2.37
PMS1-214ENST00000446877 CWC22Q9HCG8 908 aaKnown RBP29.85■■■□□ 2.37
PMS1-214ENST00000446877 FPGT-TNNI3KV9GXZ4 949 aa29.85■■■□□ 2.37
PMS1-214ENST00000446877 IGSF3O75054 1194 aa29.84■■■□□ 2.37
PMS1-214ENST00000446877 GPR153Q6NV75 609 aa29.84■■■□□ 2.37
PMS1-214ENST00000446877 DBNDD2Q9BQY9 259 aa29.84■■■□□ 2.37
PMS1-214ENST00000446877 PAGR1Q9BTK6 254 aa29.84■■■□□ 2.37
PMS1-214ENST00000446877 SAP30BPQ9UHR5 308 aaKnown RBP29.84■■■□□ 2.37
PMS1-214ENST00000446877 CYP2E1P05181 493 aaPredicted RBP29.83■■■□□ 2.37
PMS1-214ENST00000446877 RGS2P41220 211 aa29.83■■■□□ 2.37
PMS1-214ENST00000446877 ERVK-9P63128 1117 aa29.83■■■□□ 2.37
PMS1-214ENST00000446877 ERVK-24P63145 666 aa29.83■■■□□ 2.37
PMS1-214ENST00000446877 USP17L2Q6R6M4 530 aa29.83■■■□□ 2.37
PMS1-214ENST00000446877 ADGRA1Q86SQ6 560 aa29.83■■■□□ 2.37
PMS1-214ENST00000446877 COL6A3P12111 3177 aa29.83■■■□□ 2.37
PMS1-214ENST00000446877 MAGEA10P43363 369 aaPredicted RBP29.82■■■□□ 2.36
PMS1-214ENST00000446877 CACNB2Q08289 660 aaPredicted RBP29.81■■■□□ 2.36
PMS1-214ENST00000446877 SHROOM1Q2M3G4 852 aaPredicted RBP29.81■■■□□ 2.36
PMS1-214ENST00000446877 Q3C1V9 767 aa29.81■■■□□ 2.36
PMS1-214ENST00000446877 GPR142Q7Z601 462 aa29.81■■■□□ 2.36
PMS1-214ENST00000446877 PLEKHH3Q7Z736 793 aa29.81■■■□□ 2.36
PMS1-214ENST00000446877 ZNF512BQ96KM6 892 aaPredicted RBP29.81■■■□□ 2.36
PMS1-214ENST00000446877 EMILIN3Q9NT22 766 aa29.81■■■□□ 2.36
PMS1-214ENST00000446877 TNNQ9UQP3 1299 aa29.81■■■□□ 2.36
PMS1-214ENST00000446877 SURF6O75683 361 aaKnown RBP29.8■■■□□ 2.36
PMS1-214ENST00000446877 BCAR3O75815 825 aa29.8■■■□□ 2.36
PMS1-214ENST00000446877 UBE2OQ9C0C9 1292 aaKnown RBP29.8■■■□□ 2.36
PMS1-214ENST00000446877 PORCNQ9H237 461 aa29.8■■■□□ 2.36
PMS1-214ENST00000446877 GLRX3O76003 335 aaKnown RBP29.79■■■□□ 2.36
PMS1-214ENST00000446877 CYP7A1P22680 504 aa29.79■■■□□ 2.36
PMS1-214ENST00000446877 ZAP70P43403 619 aa29.79■■■□□ 2.36
PMS1-214ENST00000446877 POLA2Q14181 598 aa29.79■■■□□ 2.36
PMS1-214ENST00000446877 LRIT3Q3SXY7 679 aa29.79■■■□□ 2.36
PMS1-214ENST00000446877 TDHQ8IZJ6 230 aa29.79■■■□□ 2.36
PMS1-214ENST00000446877 DEFB123Q8N688 67 aa29.79■■■□□ 2.36
PMS1-214ENST00000446877 USP6NLQ92738 828 aa29.79■■■□□ 2.36
PMS1-214ENST00000446877 FEZ1Q99689 392 aa29.79■■■□□ 2.36
PMS1-214ENST00000446877 GH2P01242 217 aa29.78■■■□□ 2.36
PMS1-214ENST00000446877 DYNLL1P63167 89 aaKnown RBP29.78■■■□□ 2.36
PMS1-214ENST00000446877 MORN1Q5T089 497 aa29.78■■■□□ 2.36
PMS1-214ENST00000446877 PIH1D3Q9NQM4 214 aaKnown RBP29.78■■■□□ 2.36
PMS1-214ENST00000446877 PFASO15067 1338 aa29.77■■■□□ 2.36
PMS1-214ENST00000446877 USP5P45974 858 aa29.77■■■□□ 2.36
PMS1-214ENST00000446877 CCNA1P78396 465 aa29.77■■■□□ 2.36
PMS1-214ENST00000446877 ATP8B2P98198 1209 aa29.77■■■□□ 2.36
PMS1-214ENST00000446877 CCL14Q16627 93 aa29.77■■■□□ 2.36
PMS1-214ENST00000446877 CERS3Q8IU89 383 aa29.77■■■□□ 2.36
PMS1-214ENST00000446877 APBA2Q99767 749 aa29.77■■■□□ 2.36
PMS1-214ENST00000446877 ATAD5Q96QE3 1844 aa29.77■■■□□ 2.36
PMS1-214ENST00000446877 USP17L15C9J2P7 530 aa29.76■■■□□ 2.35
PMS1-214ENST00000446877 USP17L13C9JLJ4 530 aa29.76■■■□□ 2.35
PMS1-214ENST00000446877 USP17L11C9JVI0 530 aa29.76■■■□□ 2.35
PMS1-214ENST00000446877 USP17L18D6R9N7 530 aa29.76■■■□□ 2.35
PMS1-214ENST00000446877 USP17L22D6RA61 530 aa29.76■■■□□ 2.35
PMS1-214ENST00000446877 USP17L17D6RBQ6 530 aa29.76■■■□□ 2.35
PMS1-214ENST00000446877 USP17L19D6RCP7 530 aa29.76■■■□□ 2.35
PMS1-214ENST00000446877 USP17L20D6RJB6 530 aa29.76■■■□□ 2.35
PMS1-214ENST00000446877 CCND3P30281 292 aaPredicted RBP29.76■■■□□ 2.35
PMS1-214ENST00000446877 USP17L24Q0WX57 530 aa29.76■■■□□ 2.35
PMS1-214ENST00000446877 TMEM57Q8N5G2 664 aa29.76■■■□□ 2.35
PMS1-214ENST00000446877 SSH3Q8TE77 659 aa29.76■■■□□ 2.35
PMS1-214ENST00000446877 RABGAP1Q9Y3P9 1069 aa29.76■■■□□ 2.35
PMS1-214ENST00000446877 IDH1O75874 414 aaKnown RBP29.75■■■□□ 2.35
PMS1-214ENST00000446877 COL6A1P12109 1028 aa29.75■■■□□ 2.35
PMS1-214ENST00000446877 ZYXQ15942 572 aaKnown RBP29.75■■■□□ 2.35
PMS1-214ENST00000446877 ZKSCAN2Q63HK3 967 aa29.75■■■□□ 2.35
PMS1-214ENST00000446877 LHX8Q68G74 356 aa29.75■■■□□ 2.35
PMS1-214ENST00000446877 EDC3Q96F86 508 aaKnown RBP29.75■■■□□ 2.35
PMS1-214ENST00000446877 USP14P54578 494 aa29.74■■■□□ 2.35
PMS1-214ENST00000446877 MAP2K5Q13163 448 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms